For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. avium 104 MAV_4937 (-)

annotation: ribonucleotide-diphosphate reductase subunit beta
coordinates: 5076596 - 5077531
length: 311

NRTRSASMVQGGLNWDSLPLKLFAGGNAKFWNPADIDFSRDRADWERLTDDERSYATRLCAEFIAGEESV
TQDIQPFMAAMRAEGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGVTDDLHHFLDDVPSYRTIFYEELPD
CLNALTIDPSPAAQVRASVTYNHMVEGMLALTGYFGWHKICVERGILPGMQELVRRIGDDERRHMAWGTF
TCRRHVAADDANWGVFETRMNELMPLGLRLIEEGFALYDPMPFDLSVDEFMAYASDKGMRRFGTIASARG
RPLAEIDLDYTPVQLEDTFADEDARALAAV*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_4937--100% (311)ribonucleotide-diphosphate reductase subunit beta

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0238nrdB1e-15682.64% (311) ribonucleotide-diphosphate reductase subunit beta
M. gilvum PYR-GCKMflv_3061-1e-15079.68% (310) ribonucleotide-diphosphate reductase subunit beta
M. tuberculosis H37RvRv0233nrdB1e-15682.64% (311) ribonucleotide-diphosphate reductase subunit beta
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_4007c-1e-15281.35% (311) ribonucleotide-diphosphate reductase subunit beta
M. marinum M-----
M. smegmatis MC2 155MSMEG_0358-1e-15081.09% (312) ribonucleotide-diphosphate reductase subunit beta
M. thermoresistible (build 8)TH_0850nrdB1e-14179.66% (290) PROBABLE RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN)
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_3466-1e-15280.97% (310) ribonucleotide-diphosphate reductase subunit beta

CLUSTAL 2.0.9 multiple sequence alignment


Mb0238|M.bovis_AF2122/97            MTRTRSGSLAAGGLNWASLPLKLFAGGNAKFWDPADIDFTRDRADWEKLS
Rv0233|M.tuberculosis_H37Rv         MTRTRSGSLAAGGLNWASLPLKLFAGGNAKFWHPADIDFTRDRADWEKLS
MAV_4937|M.avium_104                MNRTRSASMVQGGLNWDSLPLKLFAGGNAKFWNPADIDFSRDRADWERLT
MAB_4007c|M.abscessus_ATCC_199      MTRTQYGSLRAGGLNWDSMPLKLFAGGNAKFWDPAGIDFSRDRADWESLT
MSMEG_0358|M.smegmatis_MC2_155      MTRTHFDSIRAGGLNWSSLPLKLFAGGNAKFWDPADIDFSRDRADWEALT
Mflv_3061|M.gilvum_PYR-GCK          MNRTRSDSLAAGGLNWDSLPLRLFAGGNAKFWDPADIDFSRDRADWESLS
Mvan_3466|M.vanbaalenii_PYR-1       MARTRSDSLAAGGLNWDSLPLRLFAGGNAKFWDPADIDFSRDRADWESLT
TH_0850|M.thermoresistible__bu      --------------------LKLFTKGNAKFWNPADIDFSRDREDWESLT
                                                        *:**: ******.**.***:*** *** *:

Mb0238|M.bovis_AF2122/97            DDERDYATRLCTQFIAGEEAVTEDIQPFMSAMRAEGRLADEMYLTQFAFE
Rv0233|M.tuberculosis_H37Rv         DDERDYATRLCTQFIAGEEAVTEDIQPFMSAMRAEGRLADEMYLTQFAFE
MAV_4937|M.avium_104                DDERSYATRLCAEFIAGEESVTQDIQPFMAAMRAEGRLGDEMYLTQFAFE
MAB_4007c|M.abscessus_ATCC_199      ERERDYATRLCAQFIAGEESVTQDIQPFMSAMRAEGRLGDEMYLTQFAFE
MSMEG_0358|M.smegmatis_MC2_155      EREREYATRLCAEFIAGEEAVTKDIQPFMSAMRAEGRLGDEMYLTQFAFE
Mflv_3061|M.gilvum_PYR-GCK          TMERDWATRLCAEFIAGEEAVTQDIQPFMAAMRAEGRLGDEMYLTQFAFE
Mvan_3466|M.vanbaalenii_PYR-1       DLERDWATRLCAEFIAGEEAVTQDIQPFMAAMRAEGRLGDEMYLTQFAFE
TH_0850|M.thermoresistible__bu      QLERDWATRLCAQFIAGEEAVTQDIQPFMAAMRAEGRLGDEMYLTQFAFE
                                      **.:*****::******:**:******:********.***********

Mb0238|M.bovis_AF2122/97            EAKHTQVFRMWLDAVGISEDLHRYLDDLPAYRQIFYAELPECLNALSADP
Rv0233|M.tuberculosis_H37Rv         EAKHTQVFRMWLDAVGISEDLHRYLDDLPAYRQIFYAELPECLNALSADP
MAV_4937|M.avium_104                EAKHVQVFRMWLDAVGVTDDLHHFLDDVPSYRTIFYEELPDCLNALTIDP
MAB_4007c|M.abscessus_ATCC_199      EAKHTQVFRLWLDAVGVSEDLHGYLDDLPAYREIFFDRLPDALGMLAADP
MSMEG_0358|M.smegmatis_MC2_155      EAKHTQVFRMWLDAVGVTDDLHSLIEEVPAYVQIFCEELPAALEALTSDP
Mflv_3061|M.gilvum_PYR-GCK          EAKHTQVFRMWLDAVGITEDLQGYLDDLPAYRQMFYEELPASLDALATDP
Mvan_3466|M.vanbaalenii_PYR-1       EAKHTQVFRMWLDAVGITEDLQGYLDELPAYCQMFYEELPASLDALATDP
TH_0850|M.thermoresistible__bu      EAKHTQVFRMWLDAVGMTDDLHHYLDELPAYRQMFYDELPSSLEVLATDP
                                    ****.****:******:::**:  ::::*:*  :*  .** .*  *: **

Mb0238|M.bovis_AF2122/97            SPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGD
Rv0233|M.tuberculosis_H37Rv         SPAAQVRASVTYNHIVEGMLALTGYYAWHKICVERAILPGMQELVRRIGD
MAV_4937|M.avium_104                SPAAQVRASVTYNHMVEGMLALTGYFGWHKICVERGILPGMQELVRRIGD
MAB_4007c|M.abscessus_ATCC_199      SPAAQVRASVTYNHVVEGMLALTGYFAWHKICVDRGILPGMQELVHRIGD
MSMEG_0358|M.smegmatis_MC2_155      SPAAQVRASVVYNHVVEGMLALTGYYAWHRICVDRGILPGMQELVRRIGD
Mflv_3061|M.gilvum_PYR-GCK          SPQAQVRASVTYNHVIEGMMALTGYYAWHRICVDRHILPGMQELVRRIGD
Mvan_3466|M.vanbaalenii_PYR-1       SPAAQVRASVTYNHVIEGMMALTGYYAWHRICVDRGILPGMQELVRRIGD
TH_0850|M.thermoresistible__bu      SPAAQVRASVTYNHVIEGMMALTGYYAWQRICVDRGILPGMQELVRRIGD
                                    ** *******.***::***:*****:.*::***:* *********:****

Mb0238|M.bovis_AF2122/97            DERRHMAWGTFTCRRHVAADDANWTVFETRMNELIPLALRLIEEGFALYG
Rv0233|M.tuberculosis_H37Rv         DERRHMAWGTFTCRRHVAADDANWTVFETRMNELIPLALRLIEEGFALYG
MAV_4937|M.avium_104                DERRHMAWGTFTCRRHVAADDANWGVFETRMNELMPLGLRLIEEGFALY-
MAB_4007c|M.abscessus_ATCC_199      DERRHMAWGTFTCRRHVAADDANWSVFEARMNELIPIALRLTEEGFELYG
MSMEG_0358|M.smegmatis_MC2_155      DERRHMAWGTFTCRRHVAADDANWAVFETHMNELIPVALRLTQEGFALYG
Mflv_3061|M.gilvum_PYR-GCK          DERRHMAWGTFTCRRHVAADDANWTVFEDRMNELIPLALQNTDDAFALY-
Mvan_3466|M.vanbaalenii_PYR-1       DERRHMAWGTFTCRRHVAADDANWAVFETRMNELIPLALRNTEDGFALY-
TH_0850|M.thermoresistible__bu      DERRHMAWGTFTCRRHVAADDANWNVFEERMNELIPLVLKNTEDGFAVY-
                                    ************************ *** :****:*: *:  ::.* :* 

Mb0238|M.bovis_AF2122/97            DQPPFDLSKDDFLQYSTDKGMRRFGTISNARGRPVAEIDVDYSPAQLEDT
Rv0233|M.tuberculosis_H37Rv         DQPPFDLSKDDFLQYSTDKGMRRFGTISNARGRPVAEIDVDYSPAQLEDT
MAV_4937|M.avium_104                DPMPFDLSVDEFMAYASDKGMRRFGTIASARGRPLAEIDLDYTPVQLEDT
MAB_4007c|M.abscessus_ATCC_199      DDTPFGLSLDEFMQYSADKGMRRFGTISSARGRPLAEIDLDYSPLQLEDT
MSMEG_0358|M.smegmatis_MC2_155      DDIPFGLEEGEFLQYSSDRGMRRFGTISSARGRPLAEIDVDYTPLQLEDT
Mflv_3061|M.gilvum_PYR-GCK          DEIPFGLTIEEFQQYAADKGMRRFGTISSARGRPLAEIDVDYTPLHLEDS
Mvan_3466|M.vanbaalenii_PYR-1       DEVPFGLTMEEFQQYAADKGMRRFGTISSARGRPLAEIDVDYSPLHLEDT
TH_0850|M.thermoresistible__bu      DEVPFGLTMDEFQQYATDKGMRRFGTISSARGRPLSEIDVDYSPLTLEDT
                                    *  **.*   :*  *::*:********:.*****::***:**:*  ***:

Mb0238|M.bovis_AF2122/97            FADEDRRTLAAASA------
Rv0233|M.tuberculosis_H37Rv         FADEDRRTLAAASA------
MAV_4937|M.avium_104                FADEDARALAAV--------
MAB_4007c|M.abscessus_ATCC_199      FAAEDRQALAATA-------
MSMEG_0358|M.smegmatis_MC2_155      FADEDERALTAVKAAAAAAN
Mflv_3061|M.gilvum_PYR-GCK          FADEDRKALAASA-------
Mvan_3466|M.vanbaalenii_PYR-1       FADEDRKSLAASA-------
TH_0850|M.thermoresistible__bu      FADEDEKAMAASA-------
                                    ** ** ::::*