For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LTVPRPADGGIGEALPDAVDPFALSLNENPFPPLPAVRAALIRSVCTANRYPEFLPERLRGVIAEHIGVP AELVVLGAGATGVMLQVLQALTAPGDAIAMATPTFDGYPIVARMARLNTIAVALDEHGQHDLDGLADAAA RARVVVLCRPHNPTGTVESAAAVFRFLRRVPRDTVVLLDEAYVEFTAPEHRIDVAALVACFPNVVVVRTF SKAYGLAGLRIGYGVASPRLARPLWDQQLPFGIAITSLLAVTASYRAEDELSRRIRSITAERRRLRMRLS ALGVYTTDAHANFVYLPPDPQGRAWQRVFARGGVRARYYPDGAARLTVGSRASTVAVLSAVGKATLERQV R*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_4421 | - | - | 100% (352) | histidinol-phosphate aminotransferase |
M. avium 104 | MAV_0250 | hisC | 5e-48 | 34.81% (339) | putative aminotransferase |
M. avium 104 | MAV_3186 | hisC | 2e-29 | 29.79% (339) | histidinol-phosphate aminotransferase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3800 | hisC2 | 1e-49 | 36.39% (338) | putative aminotransferase |
M. gilvum PYR-GCK | Mflv_1195 | - | 4e-47 | 36.25% (320) | putative aminotransferase |
M. tuberculosis H37Rv | Rv3772 | hisC2 | 8e-50 | 36.39% (338) | putative aminotransferase |
M. leprae Br4923 | MLBr_01258 | hisC | 8e-29 | 30.15% (335) | histidinol-phosphate aminotransferase |
M. abscessus ATCC 19977 | MAB_2168 | - | 1e-87 | 48.71% (349) | putative aminotransferase |
M. marinum M | MMAR_5326 | hisC2 | 7e-47 | 34.40% (343) | histidinol-phosphate aminotransferase HisC2 |
M. smegmatis MC2 155 | MSMEG_1491 | - | 1e-111 | 62.01% (329) | histidinol-phosphate aminotransferase 2 |
M. thermoresistible (build 8) | TH_3677 | - | 1e-118 | 66.36% (327) | PUTATIVE aminotransferase |
M. ulcerans Agy99 | MUL_4407 | hisC2 | 1e-47 | 34.69% (343) | putative aminotransferase |
M. vanbaalenii PYR-1 | Mvan_1355 | - | 1e-122 | 67.37% (331) | aminotransferase, class I and II |
CLUSTAL 2.0.9 multiple sequence alignment Mb3800|M.bovis_AF2122/97 ---------MTARLRPELAGLP--------VYVPGKTVPGAIKLASNETV Rv3772|M.tuberculosis_H37Rv ---------MTARLRPELAGLP--------VYVPGKTVPGAIKLASNETV MMAR_5326|M.marinum_M ---------MTARLRPVLAGLP--------VYVPGKTVPGAIKLASNETV MUL_4407|M.ulcerans_Agy99 ---------MTAHLRPVLAGLP--------VYVPGKTVPGAIKLASNETV Mflv_1195|M.gilvum_PYR-GCK MRAGHKLSQVSARLRPELADLP--------AYTPGRTVPGAIKIASNETV MAV_4421|M.avium_104 ---------MLTVPRPADGGIG--------EALPDAVDP--FALSLNENP TH_3677|M.thermoresistible__bu -------MTSLIEAPPAERSLPGRRQPDTTPVVPSAVDP--MALSLNESP MSMEG_1491|M.smegmatis_MC2_155 -----------------MEAVD---------ALPPAVNP--LALSLNEFP Mvan_1355|M.vanbaalenii_PYR-1 ----------MASRDTLAEAVT---------ALPRAVDP--MALSLNEFP MAB_2168|M.abscessus_ATCC_1997 -----------------MGREG-----------PVTVSP--LRLALNENP MLBr_01258|M.leprae_Br4923 ----------MNVPEPTLDDLPLRDNLRGKSPYGAMQLLVPVLLNTNENP . : ** Mb3800|M.bovis_AF2122/97 FGP----LPSVRAAIDRATDTVNRYPDNGCVQLKAALARHLG----PDFA Rv3772|M.tuberculosis_H37Rv FGP----LPSVRAAIDRATDTVNRYPDNGCVQLKAALARHLG----PDFA MMAR_5326|M.marinum_M FGP----LPSVRAAIEHATQSINRYPDNGCLAVKAALARHVSSLSAADFG MUL_4407|M.ulcerans_Agy99 FGP----LPSVRAAIEHATQSINRYPDNGCLAVKAALARHVSSLSAADFG Mflv_1195|M.gilvum_PYR-GCK HGP----LPSVRAAIADAVGGINRYPDNGYVDLNERLAKYVG------FA MAV_4421|M.avium_104 FPP----LPAVRAALIRSVCTANRYPEFLPERLRGVIAEHIG------VP TH_3677|M.thermoresistible__bu FPP----LPAVRVALIEAVSAANRYPEFLPERLRSLIAERIG------VP MSMEG_1491|M.smegmatis_MC2_155 YPP----LPAVKAALSAAVDAANRYPEFLPERLRSLIAGRVG------VD Mvan_1355|M.vanbaalenii_PYR-1 FPP----LPAVRTALAASLDCLNRYPEFLPHRLRSLIAGRLG------AD MAB_2168|M.abscessus_ATCC_1997 YRP----LPSVRDALRHDLAEVNRYPEFLPVVLPRLIADRVG------MT MLBr_01258|M.leprae_Br4923 HPPTKALVDDVVRSVQKVAVDLHRYPDRDAVALRQDLASYLTAQTGIRLG . * : * :: :***: : :* : Mb3800|M.bovis_AF2122/97 PEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPI Rv3772|M.tuberculosis_H37Rv PEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPI MMAR_5326|M.marinum_M PEHIAVGCGSVSLCQQLVQITASVGDEVIFGWRSFELYPPQVQVAGATAI MUL_4407|M.ulcerans_Agy99 PEHIAVGCGSVSLCQQLVQITASVGDEVIFGWRSFELYPPQVQVAGATAI Mflv_1195|M.gilvum_PYR-GCK PENISVGCGSVSLCQQLIQITATVGDEVLFGWRSFEIYPLQVRTAGATPV MAV_4421|M.avium_104 AELVVLGAGATGVMLQVLQALTAPGDAIAMATPTFDGYPIVARMARLNTI TH_3677|M.thermoresistible__bu PDQVILGGGATGVMLQVLHAIADEHDRIVMATPTFEGYPIVARMRRLEPV MSMEG_1491|M.smegmatis_MC2_155 EGQVIIGVGATGVIMQVLHAVTSPGDTMVMSAPTFDGYPIFAQMARLRSV Mvan_1355|M.vanbaalenii_PYR-1 PEQVVIGAGATGVLMQVLGAVTSPGDTIVMSSPTFDGYPILADMARLRPV MAB_2168|M.abscessus_ATCC_1997 PEEVVVGVGATGVALQVLQALCKPGDSLVFAHPTFDGYPILADIAGLIQV MLBr_01258|M.leprae_Br4923 VENIWAANGSNEILQQLLQAFGGPGRSAIGFVPSYSMHPIIADGTHTEWL : . *: : *:: ::. :* . : Mb3800|M.bovis_AF2122/97 QVPLTDHTFDLYAMLAAVTDRTR--LIFVCNPNNPTSTVVGPDALARFVE Rv3772|M.tuberculosis_H37Rv QVPLTDHTFDLYAMLATVTDRTR--LIFVCNPNNPTSTVVGPDALARFVE MMAR_5326|M.marinum_M QVPLTNHTFDLEAMLAAVTERTR--LIIVCNPNNPTSTVVQPEALAEFVR MUL_4407|M.ulcerans_Agy99 QVPLTNHTFDLEAMLAAVTERTR--LIIVCDPNNPTSTVVQPEALAEFVR Mflv_1195|M.gilvum_PYR-GCK QVPLTDHTFDLDAMLAAITDRTR--LIFVCNPNNPSSTVVDPGALARFVA MAV_4421|M.avium_104 AVALDEHGQHDLDGLADAAARAR--VVVLCRPHNPTGTVESAAAVFRFLR TH_3677|M.thermoresistible__bu EVPLAPDGRHDLTAMAEAAEHAR--VVALCRPHNPTGTVEPAAAIEGFLS MSMEG_1491|M.smegmatis_MC2_155 TVDLDVYGHHNLHAMADAARDAR--VVVVCRPHNPTGTIEPAEDIERFLL Mvan_1355|M.vanbaalenii_PYR-1 AVPLDAHGHHDLDAMADAAAQAR--VVVVCRPHNPTGTVESVADVERFLT MAB_2168|M.abscessus_ATCC_1997 PIPLADNGMTDLDELLGAAYDADDAALVLCRPHNPTGTLIPADQVYEFVR MLBr_01258|M.leprae_Br4923 ETVRADDFSLDVEAAVTAVADRKPDVVFIASPNNPSGQSISLADLRRLLD . : :. *:**:. : :: Mb3800|M.bovis_AF2122/97 A-VPAHILIAIDEAYVEYIRDGMRPDSLGLVRAHN-NVVVLRTFSKAYGL Rv3772|M.tuberculosis_H37Rv A-VPAHILIAIDEAYVEYIRDGMRPDSLGLVRAHN-NVVVLRTFSKAYGL MMAR_5326|M.marinum_M S-VPPHILVAIDEAYVEYLRDGTVPDSPHLVRTHS-NVVVLRTFSKAYGL MUL_4407|M.ulcerans_Agy99 S-VPPHILVAIDEAYVEYLRDGTVPDSPHLVRTHS-NVVVLRTFSKAYGL Mflv_1195|M.gilvum_PYR-GCK A-VPPHILVVLDEAYIEYVRGDLVPDSFGLVRAHS-NVVVLRTFSKAYGL MAV_4421|M.avium_104 R-VPRDTVVLLDEAYVEFTAPEHRIDVAALVACFP-NVVVVRTFSKAYGL TH_3677|M.thermoresistible__bu R-LSADTVVLIDEAYVEFVAPGHRLDAVGLIRRFP-NVVGVRTFSKAYGL MSMEG_1491|M.smegmatis_MC2_155 ESIPEDTVVLLDEAYAEFLGPANRIDGPRLVERFR-NVVVVRTFSKAYGL Mvan_1355|M.vanbaalenii_PYR-1 R-VGRDTVVLLDEAYVEFLAPEYRIDANALVRRFG-NVVVVRTFSKAYGL MAB_2168|M.abscessus_ATCC_1997 Q-APPTSVVVLDEAYIEFVDPDEHLDIPGLLRLHP-NLVVLRTFSKAYGL MLBr_01258|M.leprae_Br4923 V---VPGILIVDEAYGEFSS---RPSAVALVGEYPTKIVVTRTTSKAFAF :: :**** *: . *: . ::* ** ***:.: Mb3800|M.bovis_AF2122/97 AGLRIGYAIGHPDVITALDKVYVPFTVSSIGQAAAIASLDAADELLARTD Rv3772|M.tuberculosis_H37Rv AGLRIGYAIGHPDVITALDKVYVPFTVSSIGQAAAIASLDAADELLARTD MMAR_5326|M.marinum_M AGLRVGYAVGQPDVIAALDKVYVPFTVSSLAQAAAIASVQAADELLARTD MUL_4407|M.ulcerans_Agy99 AGLRVGYAVGQPDVIAPLDKVYVPFTVSSLAQAAAIASVQAADELLARTD Mflv_1195|M.gilvum_PYR-GCK AGLRIGYAVADPDIVTALSKVYVPFTATTVSQAAAIACLDAADELLERTD MAV_4421|M.avium_104 AGLRIGYGVASPRLARPLWDQQLPFGIAITSLLAVTASYRAEDELSRRIR TH_3677|M.thermoresistible__bu AGLRIGYAFGSPQLAARLWAMQLPFGMSITSLAAVAASYGADRQLRRRIR MSMEG_1491|M.smegmatis_MC2_155 AGLRIGYGFCAPQLARQLWTMQLPFGIGLPALVAVAASYDAEGQLRQRIR Mvan_1355|M.vanbaalenii_PYR-1 AGLRVGYGFCAPALGRTLWTMQLPFGTSLAALVAVAASFDADSQLRQRVR MAB_2168|M.abscessus_ATCC_1997 AGLRIGYGLAAPAVCGVIRRYQLPFGMNRAAAVAVAASYAAEGELRVRVD MLBr_01258|M.leprae_Br4923 AGGRLGYLIATPALVEAMLLVRLPYHLSSVTQAAARAALRHADDTLGSVA ** *:** . * : : :*: *. *. : Mb3800|M.bovis_AF2122/97 TVVAERARVSAELRAAGFTLPPSQANFVWLPLGSRTQDFVEQAADARIVV Rv3772|M.tuberculosis_H37Rv TVVAERARVSAELRAAGFTLPPSQANFVWLPLGSRTQDFVEQAADARIVV MMAR_5326|M.marinum_M AVVAERGRVSAELRAAGFTVPPSQANFVWLPLEDRTTDFVTQAAKAHIVV MUL_4407|M.ulcerans_Agy99 AVVAERGRVSAELRAAGFTVPPSQANFVWLPLEDRTTDFVTQAAKAHIVV Mflv_1195|M.gilvum_PYR-GCK AVVAERTRVSAALREAGYDLPPSQANFVWLPLVGRAQQFAADAADARIIV MAV_4421|M.avium_104 SITAERRRLRMRLSALGVYTTDAHANFVYLPPDPQGRAWQRVFARGGVRA TH_3677|M.thermoresistible__bu MITTERRYLQTQLRALGVASTDAHANFVYLPAD--GRCWPEVFAGTDLRV MSMEG_1491|M.smegmatis_MC2_155 MISAERRFLQMRLRSMGVYSTDGQANFVYLPAT--GVPWHDVFDDAGLKV Mvan_1355|M.vanbaalenii_PYR-1 SISAERRRLQMRLRALGAYTTDAHANFVYLPSG--VTSWPEVFDGTGLQV MAB_2168|M.abscessus_ATCC_1997 SIVYERDRLRARLAQMGAHIPESHANFVYLPARGDGERWMSILGTGDVVA MLBr_01258|M.leprae_Br4923 ALIAERERVTKSLVHMGFRVIPSDANFVLFGHFSDAAGAWQHYLDTGVLI : ** : * * ..**** : : Mb3800|M.bovis_AF2122/97 RPYGTDG-VRVTVAAPEENDAFLRFARRWRSDQ------------ Rv3772|M.tuberculosis_H37Rv RPYGTDG-VRVTVAAPEENDAFLRFARRWRSDQ------------ MMAR_5326|M.marinum_M RPYGADG-VRVTIAAPEENDALLRFARCWITHRDGAR-------- MUL_4407|M.ulcerans_Agy99 RPYGADG-VRVTIAAPEENDALLRFARCWITHRDGAR-------- Mflv_1195|M.gilvum_PYR-GCK RPYGEDG-VRVTVASPDENDMFLDFARDWIARP------------ MAV_4421|M.avium_104 RYYPDGA-ARLTVGSRASTVAVLS------AVGKATLERQVR--- TH_3677|M.thermoresistible__bu KHCPDGG-VRITVGDRSSTGAVLA------AIRGQR--------- MSMEG_1491|M.smegmatis_MC2_155 RHYADGG-VRVTVGTRESTREVLR------ATRLALR-------- Mvan_1355|M.vanbaalenii_PYR-1 RHYAGGG-VRITVGSRASTRAVVH------AVAAAMG-------- MAB_2168|M.abscessus_ATCC_1997 KEYSDGG-VRLTVGDPREMAIVARRLLEVDEIGESAVSRMSRPAS MLBr_01258|M.leprae_Br4923 RDVGIPGYLRATTGLAEENDAFLKASSEIAATELAPATTLGAS-- : . * * . . .