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M. avium 104 MAV_3800 (-)

annotation: putative HTH-type transcriptional regulator
coordinates: 3929077 - 3929349
length: 90

LVEISRDRALNNVMQDRFLHEQRTLVRQVLQQAISRGEIGASTINEELCDLLPGYLIFRCIFSNRPPTHL
TIETLVDNAILPKLISATE*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. avium 104MAV_3800--100% (90)putative HTH-type transcriptional regulator
M. avium 104MAV_3866-4e-2151.76% (85) transcriptional regulator, TetR family protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1581-1e-2455.06% (89) regulatory protein
M. gilvum PYR-GCKMflv_3021-5e-2048.24% (85) TetR family transcriptional regulator
M. tuberculosis H37RvRv1556-1e-2455.06% (89) regulatory protein
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_0989-9e-1948.24% (85) putative HTH-type transcriptional regulator TetR
M. marinum MMMAR_1695-5e-2355.06% (89) regulatory protein
M. smegmatis MC2 155-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99MUL_1934-3e-2355.06% (89) regulatory protein
M. vanbaalenii PYR-1-----

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_3021|M.gilvum_PYR-GCK          -MCVVSDPRSDPPSAPLKSRRTAREAQLLTITLQQLQQHGYDRLTVEAVA
MAB_0989|M.abscessus_ATCC_1997      MASDVSTGLTKAARGRQVSQWTPREVELLKVTLRLLQEHGYDRLSVDEVA
Mb1581|M.bovis_AF2122/97            ---MVGAVTQIADRPTDPSPWSPRETELLAVTLRLLQEHGYDRLTVDAVA
Rv1556|M.tuberculosis_H37Rv         ---MVGAVTQIADRPTDPSPWSPRETELLAVTLRLLQEHGYDRLTVDAVA
MMAR_1695|M.marinum_M               -------MTQTADRSAQVSPWSPREAELLAVTLQLLQEHGYDRLTIDAVA
MUL_1934|M.ulcerans_Agy99           ----MGAMTQTADRSAQVSPWSPREAELLAVTLQLLQEHGYDRLTIDAVA
MAV_3800|M.avium_104                --------------------------------------------------
                                                                                      

Mflv_3021|M.gilvum_PYR-GCK          TQAKASKATLYRRWPSKSDLVLAAFVEGTRLAAVPPRTGSLRDDLLRVGA
MAB_0989|M.abscessus_ATCC_1997      AESKASKATIYRRWPSKAELVLAAFIEGMRAQLVRPNTGSLREDLLRIGT
Mb1581|M.bovis_AF2122/97            ASARASKATVYRRWPSKAELVLAAFIEGIRQVAVPPNTGNLRDDLLRLGE
Rv1556|M.tuberculosis_H37Rv         ASARASKATVYRRWPSKAELVLAAFIEGIRQVAVPPNTGNLRDDLLRLGE
MMAR_1695|M.marinum_M               NTARASKATVYRRWPSKAELVLAAFIEGVRQVAVAPNTGSLRDDLVKIGE
MUL_1934|M.ulcerans_Agy99           NTARASKATVYRRWPSKAELVLAAFIEGVRQVAVAPNTGSLRDDLVKIGE
MAV_3800|M.avium_104                --------------------------------------------------
                                                                                      

Mflv_3021|M.gilvum_PYR-GCK          SVCQQACEHASTMRAVLNEMSHNPDLRKAMQDEFVHQHKLVIDEVLAEAV
MAB_0989|M.abscessus_ATCC_1997      NALADVRRNTPVMRGLLIEIERNPALTKAFRTKFVDERKALIDDVLFAAV
Mb1581|M.bovis_AF2122/97            LICREVGQHASTIRAVLVEVSRNPALNDVLQHQFVDHRKALIQYILQQAV
Rv1556|M.tuberculosis_H37Rv         LICREVGQHASTIRAVLVEVSRNPALNDVLQHQFVDHRKALIQYILQQAV
MMAR_1695|M.marinum_M               GICGQAHQQASTIRAVLVEVSRHPALSDALQRQFVDQRKALIQQVLQQAV
MUL_1934|M.ulcerans_Agy99           GICGQAHQQASTIRAVLVEVSRHPALSDALQRQFVDQRKALIQQVLQQAV
MAV_3800|M.avium_104                ---------------MLVEISRDRALNNVMQDRFLHEQRTLVRQVLQQAI
                                                   :* *:.:.  * ..:: .*:..:: ::  :*  *:

Mflv_3021|M.gilvum_PYR-GCK          QRGEIDATAISDEIYDLLPGYLVFRALVSARPPTLKSVRTLVDKVLLPSL
MAB_0989|M.abscessus_ATCC_1997      QRGEIDADAVNEELWDLLPGYLVFRSLLPVRSPTADTVRTLVDDVIMPSL
Mb1581|M.bovis_AF2122/97            DRGEISSAAISDELWDLLPGYLIFRSIIPNRPPTQDTVQALVDDVILPSL
Rv1556|M.tuberculosis_H37Rv         DRGEISSAAISDELWDLLPGYLIFRSIIPNRPPTQDTVQALVDDVILPSL
MMAR_1695|M.marinum_M               DRGEITQAAITDELWDLLPGYLIFRSIIPNRPPTPHTVQLLVDDFIMPGL
MUL_1934|M.ulcerans_Agy99           DRGEITQAAITDELWDLLPGYLIFRSIIPNRPPTPHTVQLLVDDFIMPGL
MAV_3800|M.avium_104                SRGEIGASTINEELCDLLPGYLIFRCIFSNRPPTHLTIETLVDNAILPKL
                                    .****   ::.:*: *******:**.:.. *.**  ::. ***. ::* *

Mflv_3021|M.gilvum_PYR-GCK          GHRGLSKPDGQ
MAB_0989|M.abscessus_ATCC_1997      TRER-------
Mb1581|M.bovis_AF2122/97            TRSTG------
Rv1556|M.tuberculosis_H37Rv         TRSTG------
MMAR_1695|M.marinum_M               TQATG------
MUL_1934|M.ulcerans_Agy99           TQATG------
MAV_3800|M.avium_104                ISATE------