For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VMAHRLETQGSLLTESWVQAGRLLLRWRRDQAVLMGSLLLPVFLLFCYQIVLGEQVHRVTGAQSVYGVVP MCAVISALFGSLGNSVGITMDRQSRLLSRMWVLPIHRASAITGWVMAEVVRALIGTTLITVIGLAMGLRF SQGWPAALLFLLVPSIVVTGFTALVMAMAIRNNGRAAMTWLLGITFALVFVNPGATPIKLFPHWAQPLIR MQPVSPPIETMRALAHGGPIAWPLEITVAWAVVLVAVFIPVAVRGYRLAAEASG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_3252 | - | - | 100% (264) | daunorubicin resistance protein C |
M. avium 104 | MAV_2004 | - | 1e-68 | 49.19% (248) | ABC-2 type transporter |
M. avium 104 | MAV_3251 | - | 2e-14 | 26.24% (221) | ABC transporter efflux protein, DrrB family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2963 | drrC | 3e-39 | 32.53% (249) | daunorubicin-DIM-transport integral membrane protein ABC |
M. gilvum PYR-GCK | Mflv_3387 | - | 1e-45 | 36.65% (251) | multidrug ABC transporter inner membrane protein |
M. tuberculosis H37Rv | Rv2938 | drrC | 3e-39 | 32.53% (249) | daunorubicin-DIM-transport integral membrane protein ABC |
M. leprae Br4923 | MLBr_02350 | - | 9e-40 | 34.00% (250) | putative antibiotic resistance membrane protein |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1769 | drrC | 2e-41 | 35.06% (251) | daunorubicin-DIM-transport integral membrane protein ABC |
M. smegmatis MC2 155 | MSMEG_6510 | - | 8e-13 | 26.27% (236) | ABC-type drug export system, membrane protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2012 | drrC | 2e-41 | 35.06% (251) | daunorubicin-DIM-transport integral membrane protein ABC |
M. vanbaalenii PYR-1 | Mvan_3120 | - | 5e-46 | 36.65% (251) | multidrug ABC transporter inner membrane protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_1769|M.marinum_M ---MTSQEIAFAPAQSQHTD-------HSARLLIWQTLVQTQRILTRWSR MUL_2012|M.ulcerans_Agy99 MIGMTSQEIAFAPAQSQHTD-------HSARLLIWQTLVQTQRILTRWSR Mb2963|M.bovis_AF2122/97 MITTTSQEIELAPTRLPGSQ-------NAARLFVAQTLLQTNRLLTRWAR Rv2938|M.tuberculosis_H37Rv MITTTSQEIELAPTRLPGSQ-------NAARLFVAQTLLQTNRLLTRWAR MLBr_02350|M.leprae_Br4923 MITMISQTVGLVPASLQYPN-------NSVRALVSQTLLQTKRLLTRWAR Mflv_3387|M.gilvum_PYR-GCK MTVESSP---PASYRVSGKHRRAHVWENSPRQLVPQVAVLTGRILRRWSR Mvan_3120|M.vanbaalenii_PYR-1 MTLESPESLVSAPYRPGGRHRREKVWENSPKRLVPQVAVLTGRILRRWSR MAV_3252|M.avium_104 ----------MMAHRLETQG-----------SLLTESWVQAGRLLLRWRR MSMEG_6510|M.smegmatis_MC2_155 ----MSVELVRAPRGLRRVR-----------AVAMRMGAFALVELQKLRH . . . : * : : MMAR_1769|M.marinum_M DFVTLIEALVFPILFMLVLKIVLGNLIYAVTH-HDAMYSIVPLIALGAAI MUL_2012|M.ulcerans_Agy99 DFVTLIEALVFPILFMLVLKIVLGNLIYAVTH-HDAMYSIVPLIALGAAI Mb2963|M.bovis_AF2122/97 DYITVIGAIVLPILFMVVLNIVLGNLAYVVTH-DSGLYSIVPLIALGAAI Rv2938|M.tuberculosis_H37Rv DYITVIGAIVLPILFMVVLNIVLGNLAYVVTH-DSGLYSIVPLIALGAAI MLBr_02350|M.leprae_Br4923 DYVTIIGALVLPILFLVVLNIVLGNLAYVVTY-DSGLYSFVPLITLGAAI Mflv_3387|M.gilvum_PYR-GCK DPATLVQSMVMPAVFLIALDIVLGDVIEAVTG-HSGLYGQVPLVALVGGM Mvan_3120|M.vanbaalenii_PYR-1 DPATLVQSLVMPAVFLVALDIVLGDVIEQVTG-HSGLYGQVPLVALVGGM MAV_3252|M.avium_104 DQAVLMGSLLLPVFLLFCYQIVLGEQVHRVTG-AQSVYGVVPMCAVISAL MSMEG_6510|M.smegmatis_MC2_155 DRTELFTRMVQPALWLLIFGQTFSRLHVVDTGGVPYLAFLAPGIIAQSAL * :. :: * . :. .:. * : .* ..: MMAR_1769|M.marinum_M TGSAFVAIDLMRERTSGLLSRLWVLPVHRMSGLMARILADAVRILFTTLV MUL_2012|M.ulcerans_Agy99 TGSAFVAIDLMRERTSGLLSRLWVLPVHRMSGLMARILADAVRILFTTLV Mb2963|M.bovis_AF2122/97 TGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLV Rv2938|M.tuberculosis_H37Rv TGSTFVAIDLMRERSFGLLARLWVLPVHRASGLISRILANAIRTLVTTLV MLBr_02350|M.leprae_Br4923 TGSTFVAIDLVRERSIGLLSRLWVLPIHRASGLLARILANTIRTFVTTLV Mflv_3387|M.gilvum_PYR-GCK TGSIIGAVGIMRERDAGLLSRLWVVPVHRAAGLLARLAADFIRITAITLV Mvan_3120|M.vanbaalenii_PYR-1 TGAIIGAVGIMREREAGLLSRFWVVPVHRAAGLLARLAADFVRIVVITLV MAV_3252|M.avium_104 FGSLGNSVGITMDRQSRLLSRMWVLPIHRASAITGWVMAEVVRALIGTTL MSMEG_6510|M.smegmatis_MC2_155 FISIFYGIQIIWDRDAGILAKLMVTPAPASALVAGKAFAAGVRSVVQVIG : .: : :* :*::: * * : : . * :* . MMAR_1769|M.marinum_M MLGVGILMGFEFRQGLIASLMWLCVPVTLGIAFAVMVTTVA-LYSSQAVI MUL_2012|M.ulcerans_Agy99 MLGVGILMGFEFRQGLIASLMWLCVPVTLGIAFAVMVTTVA-LYSSQAVI Mb2963|M.bovis_AF2122/97 MLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVA-LYTAQTVV Rv2938|M.tuberculosis_H37Rv MLGTGVVLGFRFRQGLIPSLMWISVPVILGIAIAAMVTTVA-LYTAQTVV MLBr_02350|M.leprae_Br4923 MLVTGVILGFRFRQGVIASLMWVSVPVIFGIAIAVMVTTVA-LYTEQTFV Mflv_3387|M.gilvum_PYR-GCK VMSVGLVLGFRFEQGIPAAIAWVFMPALFGVTLSAAVLTLA-LLSSSTIA Mvan_3120|M.vanbaalenii_PYR-1 VMVVGLALGFRFEQGILAAVVWVFMPALFGVALSAAVLTLA-LFSSSTIA MAV_3252|M.avium_104 ITVIGLAMGLRFSQGWPAALLFLLVPSIVVTGFTALVMAMA-IRNNGRAA MSMEG_6510|M.smegmatis_MC2_155 VVALAYLMGIALTLNPLRILAAMGVVVLGAAFFACLSMTLAGLVRKRDRL : . :*: : . : : : :: ::* : MMAR_1769|M.marinum_M VEGVELTQAIAIFFSTGLIPLDQYPHWIQPVVAHQPVSYAVSAMRGLSMG MUL_2012|M.ulcerans_Agy99 VEGVELTQAIAIFFSTGLIPLDQYPHWIQPVVAHQPVSYAVSAMRGLSMG Mb2963|M.bovis_AF2122/97 VEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMG Rv2938|M.tuberculosis_H37Rv VEGVELVQAIAIFFSTGLVPLNSYPGWIQPFVAHQPVSYAIAAMRGFAMG MLBr_02350|M.leprae_Br4923 VEAVELVQAIAVFLSTGLVPLNQYPGWIQPLVAHQPVSYAIAAMRGLSMG Mflv_3387|M.gilvum_PYR-GCK PQATEILIAILMFFSIGFVPLDQYPEWLQPFVEHQPVSTTIEAMKGLSLE Mvan_3120|M.vanbaalenii_PYR-1 PQATEIVIAILMFFSIGFVPLDQYPKWLQPFVEHQPVSTTIKAMKGLSLE MAV_3252|M.avium_104 MTWLLGITFALVFVNPGATPIKLFPHWAQPLIRMQPVSPPIETMRALAHG MSMEG_6510|M.smegmatis_MC2_155 MGIGQAITMPLFFASNALYPVDIMPTWLRWLSAVNPLSYEVNALRGLLIG .* . . *:. * * : . :*:* : :::.: MMAR_1769|M.marinum_M GPVLLPMIGVLLWTAGICAVCAVPLAVGWRRASTH-- MUL_2012|M.ulcerans_Agy99 GPVLLPMIGVLLWTAGICAVCAVPLAVGWRRASTH-- Mb2963|M.bovis_AF2122/97 GPVLSPMIGMLVWTAGICVVCAVPLAIGYRRASTH-- Rv2938|M.tuberculosis_H37Rv GPVLSPMIGMLVWTAGICVVCAVPLAIGYRRASTH-- MLBr_02350|M.leprae_Br4923 GPVLASMVAMLVWTAGICASCAVPLGVGYRRACTH-- Mflv_3387|M.gilvum_PYR-GCK GPIAQPVLFSVLWAAGIAAVCAVPLAIGYRRASKRG- Mvan_3120|M.vanbaalenii_PYR-1 GPIAQPVLLSVLWAAGIAAVCAVPLAIGFRKASKRG- MAV_3252|M.avium_104 GPIAWPLEITVAWAVVLVAVFIPVAVRGYRLAAEASG MSMEG_6510|M.smegmatis_MC2_155 TPTNWVLDITVLVAAAVLGVVAASALLRRLVR----- * : : :. :