For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SDPENLAWLPFTIAEATTADKPDTPDLAEAWSHLLARLGEAAQMVESDPANQNRIDAAAGLRHLLVLLAA GIDEALRFDPDPVLRVQRTSTDDVVTWGMECPDCLYTRAVLRGGESYRLFGNRGTARYVGLQTMNGIAAT ANCLVDELETDAEGNFEVVLSASEQTRPGGNWMRIDGEHPTLTVRHFFYDWDVEVPSSLHIEQLGDVTRP ARYGVDPELAVTRQLVALGDFVKNNLTFFLQFGAAAPKNGFLPAIDRTDMGAAAENRPVIGRWELCPNEA LIVEVEPPQGIYWSFSIGNPWWETIHYGRHQSSLNAHQTAVDADGMVRVVLCAEDPGVANWLDTAGHGNG PIILRCVRTTTAPTPRTRVVAFDDISSELPSDTARVTAGQRESIVAARRRAVHERFGR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2441 | - | - | 100% (409) | hypothetical protein MAV_2441 |
M. avium 104 | MAV_0063 | - | 1e-36 | 29.90% (408) | hypothetical protein MAV_0063 |
M. avium 104 | MAV_5268 | - | 5e-30 | 28.37% (356) | hypothetical protein MAV_5268 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3561c | - | 7e-30 | 29.43% (384) | hypothetical protein Mb3561c |
M. gilvum PYR-GCK | Mflv_2496 | - | 2e-35 | 30.51% (413) | hypothetical protein Mflv_2496 |
M. tuberculosis H37Rv | Rv3531c | - | 7e-30 | 29.43% (384) | hypothetical protein Rv3531c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3969 | - | 2e-31 | 29.87% (385) | hypothetical protein MAB_3969 |
M. marinum M | MMAR_0906 | - | 1e-32 | 28.60% (437) | hypothetical protein MMAR_0906 |
M. smegmatis MC2 155 | MSMEG_5932 | - | 2e-27 | 26.29% (388) | hypothetical protein MSMEG_5932 |
M. thermoresistible (build 8) | TH_3890 | - | 2e-36 | 32.08% (318) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | MUL_0659 | - | 5e-33 | 28.83% (437) | hypothetical protein MUL_0659 |
M. vanbaalenii PYR-1 | Mvan_4829 | - | 9e-33 | 29.20% (387) | hypothetical protein Mvan_4829 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0906|M.marinum_M ------------------MSAETSQASLHAAWTDMIDALTRARDAVDSAE MUL_0659|M.ulcerans_Agy99 ------------------MSAETSQASLHAAWTDMIDALTRARDAVDSAE Mb3561c|M.bovis_AF2122/97 -----------------------------MYSDPLREAIAEAEQLVAAAP Rv3531c|M.tuberculosis_H37Rv -----------------------------MYSDPLREAIAEAEQLVAAAP MSMEG_5932|M.smegmatis_MC2_155 -----------------------------MYSQPLVDAIAEAERLVAAAP Mvan_4829|M.vanbaalenii_PYR-1 -------MRYFIRNIDHSGPILEHMSEVKMYVQEFLDRIAAAERLVREAP MAB_3969|M.abscessus_ATCC_1997 ------------------------MATDDAVTQPFTDAIAEAEKLVASAP MAV_2441|M.avium_104 MSDPENLAWLPFTIAEATTADKPDTPDLAEAWSHLLARLGEAAQMVESDP Mflv_2496|M.gilvum_PYR-GCK ----------------MAYGDGPDDVALRRAWETFCYQVKAAGQQIFKEH TH_3890|M.thermoresistible__bu ------------------------------MTGTATAVLAPPGNIGAATP : . MMAR_0906|M.marinum_M LHAPPVTAAGLADGYGYLLGFVFSGIERAFGENPD--FPYFRRAIQPLDK MUL_0659|M.ulcerans_Agy99 LHAPPVTAAGLADGYGYLLGFVFSGIERALGENPD--FPYFRRAIQPLDK Mb3561c|M.bovis_AF2122/97 HIET---EADLLEGLQYLAGCIAGCMHLAFDYERD--HPFLQSGTGPFTK Rv3531c|M.tuberculosis_H37Rv HIET---EADLLEGLQYLAGCIAGCMHLAFDYERD--HPFLQSGTGPFTK MSMEG_5932|M.smegmatis_MC2_155 FIES---EADLTEGLQYLAGCVSGCLHLAFDYDRD--HPFLQSGTGPFTK Mvan_4829|M.vanbaalenii_PYR-1 HVES---EADLLEGLQYLAGCIAACTRLAFDYDRD--HPFLHSGTGPFTK MAB_3969|M.abscessus_ATCC_1997 HIES---EADLLEGLEYLAGSIAASLHLVYNFSTE--HPVLLSGTGPFTK MAV_2441|M.avium_104 ANQN---RIDAAAGLRHLLVLLAAGIDEALRFDPDPVLRVQRTSTDDVVT Mflv_2496|M.gilvum_PYR-GCK NPAS---ELHRVDALRFLTQNLGQAFDLALETRDTR-YPGMHAFCGPTRK TH_3890|M.thermoresistible__bu EGDN-------------IAEMMALAQAQLLQQAADLVRPVWVPFLSKTIR : : MMAR_0906|M.marinum_M ATIDNADALYLSAPIDGAQSYRVTGRFVGPKPPQYLIFEAHT---DYA-- MUL_0659|M.ulcerans_Agy99 ATIDNADALYLSAPIDGAQSYRVTGRFVGPKPPQYLIFEAHI---DYA-- Mb3561c|M.bovis_AF2122/97 MGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEY---TDY-- Rv3531c|M.tuberculosis_H37Rv MGLDNPDTLYFGTRLQANRDYVVSGRRGTTTDLSFQLLGGEY---TDY-- MSMEG_5932|M.smegmatis_MC2_155 MGLDNPDTLYFGTRVQPGHEYVVTGKRGTTTDLSFQVLGGEY---TDD-- Mvan_4829|M.vanbaalenii_PYR-1 MALDNPDTLYFGTWLQGGHEYVLTGRRGTTTDLSFQLLGGEY---TED-- MAB_3969|M.abscessus_ATCC_1997 MGLDNPDFLYFATQIDGHHDYVLSGTRGSTVDLNFQLLDSAY---TDR-- MAV_2441|M.avium_104 WGMECPDCLYTRAVLRGGESYRLFGNRGTARYVGLQTMNGIA---ATA-- Mflv_2496|M.gilvum_PYR-GCK LGGDCADFTYQQAWIDGDSVYRIHGERGTARFFNITVQGPRP---DGP-- TH_3890|M.thermoresistible__bu SAGANADTTYGVALLEPGGSYRISGRRGTVVFADLLVGAGLLGVVERQQP .* * : : * : * MMAR_0906|M.marinum_M GDTGGLAELMPGGRVVTGALDTADLAVGEDGRFEILLGPRRPGEHTGNFI MUL_0659|M.ulcerans_Agy99 GDTGGLAELMPGGRVVTGALDTADLAVGEDGRFEILLGPRRPGEHTGNFI Mb3561c|M.bovis_AF2122/97 NVPA-----------SQAAFDDRELDIAADGSFEWRLRPS---------- Rv3531c|M.tuberculosis_H37Rv NVPA-----------SQAAFDDRELDIAADGSFEWRLRPS---------- MSMEG_5932|M.smegmatis_MC2_155 NVPA-----------SQAAFDDRELDIAEDGTFEWRITPT---------- Mvan_4829|M.vanbaalenii_PYR-1 NVPD-----------NQFAFDDRELDLAVDGSFEWRFTPN---------- MAB_3969|M.abscessus_ATCC_1997 DVPE-----------SVTAFDDRNLAIHEDGSYRVSIGAAPVTGCD---- MAV_2441|M.avium_104 NCLV------------------DELETDAEGNFEVVLSASEQTRPGG--- Mflv_2496|M.gilvum_PYR-GCK GVLHEPFG-----DVPEASLAGAELAVDHDGTFEVFLGGAPRASN----- TH_3890|M.thermoresistible__bu ---------------NVGVVDFTDLDLGDDDTVELILSAERPAGYDG--- :* :. . : MMAR_0906|M.marinum_M ATRTPDGTATARFLIARILFHDWEHEMSPDLHIVQIGKQGAQPEP--ADP MUL_0659|M.ulcerans_Agy99 ATRTPDGTATARFLIARILFHDWEHEMSPDLHIVQIGKQGAQPEP--ADP Mb3561c|M.bovis_AF2122/97 ---------APGQLVIREVYGDWSQQRG-TLAIARLDTVGTAPPP--LTR Rv3531c|M.tuberculosis_H37Rv ---------APGQLVIREVYGDWSQQRG-TLAIARLDTVGTAPPP--LTR MSMEG_5932|M.smegmatis_MC2_155 ---------SPSQLVIREVYNDWSAQRG-HLAIARTDTAGTAPPP--LTK Mvan_4829|M.vanbaalenii_PYR-1 ---------SDAQLVVREVYNDWSAQRG-TIAIARTDSTGTAPRT--LTP MAB_3969|M.abscessus_ATCC_1997 --THIPIAPRPAQLIVREAYNDWTENRG-TVAISRADTLGIGAAP--LTK MAV_2441|M.avium_104 --NWMRIDGEHPTLTVRHFFYDWDVEVPSSLHIEQLGDVTRPARYGVDPE Mflv_2496|M.gilvum_PYR-GCK ---WLPTTAGSRKLFVRQGFDSWD-EIPARIAIERVDMAEPKPLP---TA TH_3890|M.thermoresistible__bu --HWFRLDPTADHVWLRQYFYDWETERPWSVTIERLDVAPTDPPK----- : * : .* : : * : . . MMAR_0906|M.marinum_M AVVAQNMRRLGTIVENQMRFWNEFYDVVLEAHGDKNGDGFTLMPRNSLNE MUL_0659|M.ulcerans_Agy99 AVVAQNMRRLGTIVENQMRFWNEFYDVVLEAHGDKNGDGFTLMPRNSLNE Mb3561c|M.bovis_AF2122/97 ELMEKRYATAGSQLVNRVKTWLQFPQWFYLNI-----------PVNTMVA Rv3531c|M.tuberculosis_H37Rv ELMEKRYATAGSQLVNRVKTWLQFPQWFYLNI-----------PVNTMVA MSMEG_5932|M.smegmatis_MC2_155 ELIEKRYAVAGKQLVQRVKTWLQFPQWFYNNL-----------PVNTMVA Mvan_4829|M.vanbaalenii_PYR-1 ELIAIRYAAAGKHLTRRIRTWLSFPQWFYLNV-----------PVNTLTA MAB_3969|M.abscessus_ATCC_1997 EFVLGRYIGAGHHLINRVKTWLQFPQWFYMNN-----------PPNVFEP MAV_2441|M.avium_104 LAVTRQLVALGDFVKNNLTFFLQFGAAAPKNG-----------FLPAIDR Mflv_2496|M.gilvum_PYR-GCK QQMVDAIAWAGDFLTGVMGDWPEFPFTHGGVD------------ADAPNR TH_3890|M.thermoresistible__bu --PALRDVEINGFVDRYVSMWQSHVAAMADRG-----------YVNRLET . : : : .. MMAR_0906|M.marinum_M PALANLAMGGGQSTNVYCGGVYDLRADEALLVEVVVPVPPAYMGFHLSNL MUL_0659|M.ulcerans_Agy99 PALANLAMGGGQSTNVYCGGVYDLRADEALLVEVVVPVPPAYMGFHLSNL Mb3561c|M.bovis_AF2122/97 PRLT----PGGLATQYSSAGHFELRPGQALVITVPV-SDAPYLGFQLGSM Rv3531c|M.tuberculosis_H37Rv PRLT----PGGLATQYSSAGHFELRPGQALVITVPV-SDAPYLGFQLGSM MSMEG_5932|M.smegmatis_MC2_155 PRLT----PGGLATQYSSVGHFDLRPDQAMVITLPV-TDAPYLGFQLGSL Mvan_4829|M.vanbaalenii_PYR-1 PRIT----PGGLATQYSSVGHFDLGPGRAMVITLPA-SDAPYLGFQLGSM MAB_3969|M.abscessus_ATCC_1997 PRIT----PGGLSSQFSSVGYFELEPGQALMVTVPK-SDAPYQGFQLGSM MAV_2441|M.avium_104 TDMG------AAAENRPVIGRWELCPNEALIVEVEP-PQGIYWSFSIGNP Mflv_2496|M.gilvum_PYR-GCK FPAVVSTDGDTKRGRAAVNMHWVLTPDEALVIEFDA--HDGFWSLTNMGV TH_3890|M.thermoresistible__bu VGLP---DTTGMVAQSYFQGVYEIAEDEALLLEVRPPRRCRYWSVQLTDD . : : ..*::: . : .. . MMAR_0906|M.marinum_M WGESLDYANHACSLNGFQSEPDADARIRYVIADTDPGVPNWLDTAGRLGG MUL_0659|M.ulcerans_Agy99 WGESLDYANHACSLNGFQSEPDADARMRYVIADTDPGVPNWLDTAGRLGG Mb3561c|M.bovis_AF2122/97 WYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLGHRRG Rv3531c|M.tuberculosis_H37Rv WYISLDYINHQTSLNASQAQADPDGKVRIVVAEQNPGVTNWVETLGHRRG MSMEG_5932|M.smegmatis_MC2_155 WYISLDYINHQTSLNGTQAQEDPDGKIRIVVSDANPGVTNWCETLGHRKG Mvan_4829|M.vanbaalenii_PYR-1 WYISLDYINHQTSLNGTQAQVDPDGMIRIVVAHESPGIANWVETLGHRRG MAB_3969|M.abscessus_ATCC_1997 WYVSLDYINHQTSLNSHQSHVDPDGKIRLVISDQNPGVVNWIETVGHRRG MAV_2441|M.avium_104 WWETIHYGRHQSSLNAHQTAVDADGMVRVVLCAEDPGVANWLDTAGHGNG Mflv_2496|M.gilvum_PYR-GCK FFNSMDFRYRPVSYTASRTAVDTDGKVRLVLAHTDPGFHNWIDTQGFERG TH_3890|M.thermoresistible__bu RYISLDWMWRQTSLNGHQARLDPDGVFRAVISHRDPGVHNWLDAAGWTRG ::.: : * .. :: *.*. .* *:. .**. ** :: * * MMAR_0906|M.marinum_M FLTLRWTYCD-PPSELPKASAVKVPLASVRQHLPADTR-TVSVEERRRQI MUL_0659|M.ulcerans_Agy99 FLTLRWTYCD-PPSELPKASAVKVPLASVRQHLPADTR-TVSVEERRRQI Mb3561c|M.bovis_AF2122/97 FLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARI Rv3531c|M.tuberculosis_H37Rv FLQFRWQRVSRELTEADGPTVELVDFDAIPAALPHYQHNKISEDDWRARI MSMEG_5932|M.smegmatis_MC2_155 YLQFRWQRLSRALTEADGPTVEVVDIDQVPEKLPYHESNKISEADWRARI Mvan_4829|M.vanbaalenii_PYR-1 YLQFRWQRTSRKLTAAEGPIAEVVDFDAIPSRLPYFGHNTISNDDFRTRI MAB_3969|M.abscessus_ATCC_1997 FLKFRWQRTNRPILDEDGPRAEVVDFDRIKVSLPFHADHIVTAQQWRSRI MAV_2441|M.avium_104 PIILRCVRTT----TAPTPRTRVVAFDDISSELPSDTA-RVTAGQRESIV Mflv_2496|M.gilvum_PYR-GCK NVTYRHMLDG----APVPLRTEVVKHSELAGVLPADTA-TVTAEERRAQM TH_3890|M.thermoresistible__bu TILGRWNRAD----ANPVPSVKLVDFADLPGFLPADVP-RITSDERRAQL : * . * : ** :: : . : MMAR_0906|M.marinum_M SVRQEHVQRRYRQY MUL_0659|M.ulcerans_Agy99 SVRQEHVQRRYRQY Mb3561c|M.bovis_AF2122/97 ALRQRQIATRMLG- Rv3531c|M.tuberculosis_H37Rv ALRQRQIATRMLG- MSMEG_5932|M.smegmatis_MC2_155 ALRQQQIQNRMVG- Mvan_4829|M.vanbaalenii_PYR-1 ALRQNQIANRMVA- MAB_3969|M.abscessus_ATCC_1997 AARQTAVATRMLG- MAV_2441|M.avium_104 AARRRAVHERFGR- Mflv_2496|M.gilvum_PYR-GCK RVRFDAVGRRYTAL TH_3890|M.thermoresistible__bu RAR-AAAAQRMG-- * *