For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSAETSQASLHAAWTDMIDALTRARDAVDSAELHAPPVTAAGLADGYGYLLGFVFSGIERAFGENPDFPY FRRAIQPLDKATIDNADALYLSAPIDGAQSYRVTGRFVGPKPPQYLIFEAHTDYAGDTGGLAELMPGGRV VTGALDTADLAVGEDGRFEILLGPRRPGEHTGNFIATRTPDGTATARFLIARILFHDWEHEMSPDLHIVQ IGKQGAQPEPADPAVVAQNMRRLGTIVENQMRFWNEFYDVVLEAHGDKNGDGFTLMPRNSLNEPALANLA MGGGQSTNVYCGGVYDLRADEALLVEVVVPVPPAYMGFHLSNLWGESLDYANHACSLNGFQSEPDADARI RYVIADTDPGVPNWLDTAGRLGGFLTLRWTYCDPPSELPKASAVKVPLASVRQHLPADTRTVSVEERRRQ ISVRQEHVQRRYRQY
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_0906 | - | - | 100% (435) | hypothetical protein MMAR_0906 |
M. marinum M | MMAR_5019 | - | 7e-35 | 28.34% (427) | hypothetical protein MMAR_5019 |
M. marinum M | MMAR_0221 | - | 7e-13 | 25.08% (299) | hypothetical protein MMAR_0221 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3561c | - | 5e-36 | 28.33% (420) | hypothetical protein Mb3561c |
M. gilvum PYR-GCK | Mflv_1529 | - | 1e-35 | 27.62% (420) | hypothetical protein Mflv_1529 |
M. tuberculosis H37Rv | Rv3531c | - | 5e-36 | 28.33% (420) | hypothetical protein Rv3531c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4179c | - | 3e-37 | 28.47% (418) | hypothetical protein MAB_4179c |
M. avium 104 | MAV_0629 | - | 4e-36 | 28.24% (425) | hypothetical protein MAV_0629 |
M. smegmatis MC2 155 | MSMEG_5932 | - | 3e-37 | 27.10% (417) | hypothetical protein MSMEG_5932 |
M. thermoresistible (build 8) | TH_0374 | - | 5e-36 | 28.16% (419) | HYPOTHETICAL PROTEIN Rv3531c |
M. ulcerans Agy99 | MUL_0659 | - | 0.0 | 99.31% (435) | hypothetical protein MUL_0659 |
M. vanbaalenii PYR-1 | Mvan_5229 | - | 4e-35 | 27.00% (437) | hypothetical protein Mvan_5229 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3561c|M.bovis_AF2122/97 ------------MYSDPLREAIAEAEQLVAAAPHIET---EADLLEGLQY Rv3531c|M.tuberculosis_H37Rv ------------MYSDPLREAIAEAEQLVAAAPHIET---EADLLEGLQY MAV_0629|M.avium_104 ------------MFSDPLTSAIAEAENLVAAAPHIET---EADLLEGLQY TH_0374|M.thermoresistible__bu ------------MYSQPLLDAIAEAERIVTEAPHIET---EADLLEGLHY Mflv_1529|M.gilvum_PYR-GCK ------------MFAQPLADAIAEAEELVSAAPFIES---EADLLEGLQY Mvan_5229|M.vanbaalenii_PYR-1 MTPDRTRSSFGAVFTQPLAEAIAEAEKLVAAAPFIES---EADLLEGLQY MSMEG_5932|M.smegmatis_MC2_155 ------------MYSQPLVDAIAEAERLVAAAPFIES---EADLTEGLQY MAB_4179c|M.abscessus_ATCC_199 ------------MYSEAFTAAIVEAEELIVAAPHIET---EADLLEGLQY MMAR_0906|M.marinum_M -MSAETSQASLHAAWTDMIDALTRARDAVDSAELHAPPVTAAGLADGYGY MUL_0659|M.ulcerans_Agy99 -MSAETSQASLHAAWTDMIDALTRARDAVDSAELHAPPVTAAGLADGYGY : *:..*. : * . *.* :* * Mb3561c|M.bovis_AF2122/97 LAGCIAGCMHLAFDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTRLQANR Rv3531c|M.tuberculosis_H37Rv LAGCIAGCMHLAFDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTRLQANR MAV_0629|M.avium_104 LAGCISACIHLAVDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTRVHAGY TH_0374|M.thermoresistible__bu LAGCISACIHLAFDYERDHPFLQSGTGPFTKMGLDNPDTLYFGTRVLPGH Mflv_1529|M.gilvum_PYR-GCK LAGCIAACTHVAFDYDRDHPFLHSGTGPFTKMGLDNPDTMYFGTRVQPGH Mvan_5229|M.vanbaalenii_PYR-1 LAGCVAACTHVAFDYDRDHPFLHSGTGPFTKMGLDNPDTMYFGTRVQPGH MSMEG_5932|M.smegmatis_MC2_155 LAGCVSGCLHLAFDYDRDHPFLQSGTGPFTKMGLDNPDTLYFGTRVQPGH MAB_4179c|M.abscessus_ATCC_199 LAQGIAACTHMAFHTDRDHPFLLSGTGPFTKMGLDNPDTLYFGARVSGEY MMAR_0906|M.marinum_M LLGFVFSGIERAFGENPDFPYFRRAIQPLDKATIDNADALYLSAPIDGAQ MUL_0659|M.ulcerans_Agy99 LLGFVFSGIERALGENPDFPYFRRAIQPLDKATIDNADALYLSAPIDGAQ * : . . *. : *.*:: . *: * :**.*::*:.: : Mb3561c|M.bovis_AF2122/97 DYVVSGRRGTTTDLSFQLLGG--EYTDYN------VPAS---QAAFDDRE Rv3531c|M.tuberculosis_H37Rv DYVVSGRRGTTTDLSFQLLGG--EYTDYN------VPAS---QAAFDDRE MAV_0629|M.avium_104 DYVVTGRRGTTTDLSFQLLGG--EYTDDN------VPAS---QAAFDDRE TH_0374|M.thermoresistible__bu EYVVTGTRGTTTDLSFQLLGG--EYTDEG------VPES---QAAFDDRE Mflv_1529|M.gilvum_PYR-GCK EYVVTGRRGTTTDVSFQLLGG--EYTDEV------VPDS---DTAFDDRK Mvan_5229|M.vanbaalenii_PYR-1 EYVVTGRRGTTTDVSFQLLGG--EYTDEV------VPDS---ETAFDDRK MSMEG_5932|M.smegmatis_MC2_155 EYVVTGKRGTTTDLSFQVLGG--EYTDDN------VPAS---QAAFDDRE MAB_4179c|M.abscessus_ATCC_199 EYVVTGKRGTTTDLSFQVLGGG-DYTDKN------VPGS---AIAFDDRE MMAR_0906|M.marinum_M SYRVTGRFVGPKPPQYLIFEAHTDYAGDTGGLAELMPGGRVVTGALDTAD MUL_0659|M.ulcerans_Agy99 SYRVTGRFVGPKPPQYLIFEAHIDYAGDTGGLAELMPGGRVVTGALDTAD .* *:* .. .: :: . :*:. :* . *:* . Mb3561c|M.bovis_AF2122/97 LDIAADGSFEWRLRPS-------------------APGQLVIREVYGDWS Rv3531c|M.tuberculosis_H37Rv LDIAADGSFEWRLRPS-------------------APGQLVIREVYGDWS MAV_0629|M.avium_104 LDIAPDGSFEWRVRPT-------------------SNGQLVIREVYGDWA TH_0374|M.thermoresistible__bu LDIGEDGRFEWRFTPE-------------------QPSQLVIREVYGDWS Mflv_1529|M.gilvum_PYR-GCK LDIAADGTFEWRFTPA-------------------VPSQLVIREVYNDWS Mvan_5229|M.vanbaalenii_PYR-1 LDIAADGTFEWRFTPK-------------------VPSQLVIREVYNDWS MSMEG_5932|M.smegmatis_MC2_155 LDIAEDGTFEWRITPT-------------------SPSQLVIREVYNDWS MAB_4179c|M.abscessus_ATCC_199 IHIDSDGSFEVRFGPAPADDSR-----PNYFTLGPGPAQLVMREVYSDWR MMAR_0906|M.marinum_M LAVGEDGRFEILLGPRRPGEHTGNFIATRTPDGTATARFLIARILFHDWE MUL_0659|M.ulcerans_Agy99 LAVGEDGRFEILLGPRRPGEHTGNFIATRTPDGTATARFLIARILFHDWE : : ** ** . * *: * :: ** Mb3561c|M.bovis_AF2122/97 QQRG-TLAIARLDTVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQ Rv3531c|M.tuberculosis_H37Rv QQRG-TLAIARLDTVGTAPPPLTRELMEKRYATAGSQLVNRVKTWLQFPQ MAV_0629|M.avium_104 AQRG-TLAIAREDTAGTAPPPLTRETIEKRYATAGKQLVNRVKTWLQFPQ TH_0374|M.thermoresistible__bu QQRG-TIAIARTDTAGTAPPPPTRRTIEKRYAVAGRQLVQRVKTWLQFPQ Mflv_1529|M.gilvum_PYR-GCK AQRG-TFAIARTDTAGTAPPPLTRELIEKRYTVAGKQLVQRVKTWLQFPQ Mvan_5229|M.vanbaalenii_PYR-1 AQRG-TFAIARTDTAGTAPPPLTRELIEKRYAVAGKQLVQRVKTWLQFPQ MSMEG_5932|M.smegmatis_MC2_155 AQRG-HLAIARTDTAGTAPPPLTKELIEKRYAVAGKQLVQRVKTWLQFPQ MAB_4179c|M.abscessus_ATCC_199 EQRG-SLAIARVDTAGTAPAPLTKEQIEKRYASAGKQLVNRVKTWLQFPK MMAR_0906|M.marinum_M HEMSPDLHIVQIGKQGAQPEPADPAVVAQNMRRLGTIVENQMRFWNEFYD MUL_0659|M.ulcerans_Agy99 HEMSPDLHIVQIGKQGAQPEPADPAVVAQNMRRLGTIVENQMRFWNEFYD : . : *.: .. *: * * : :. * : :::: * :* . Mb3561c|M.bovis_AF2122/97 WFYLNI-----------PVNTMVAPRLT----PGGLATQYSSAGHFELRP Rv3531c|M.tuberculosis_H37Rv WFYLNI-----------PVNTMVAPRLT----PGGLATQYSSAGHFELRP MAV_0629|M.avium_104 WFYFNI-----------PVNTMVAPRLT----PGGLATQYSSAGHYELRP TH_0374|M.thermoresistible__bu WFYFNI-----------PVNTMVPPRLT----PGGLSTQYSSAGHYELEP Mflv_1529|M.gilvum_PYR-GCK WFYNDS-----------PPNTMVAPRLT----PGGLATQYSSAGQFDLAE Mvan_5229|M.vanbaalenii_PYR-1 WFYNDT-----------QPNSMVAPRLT----PGGLATQYSSAGQFDLAE MSMEG_5932|M.smegmatis_MC2_155 WFYNNL-----------PVNTMVAPRLT----PGGLATQYSSVGHFDLRP MAB_4179c|M.abscessus_ATCC_199 WFYDNL-----------PVNTMTEPRLT----PGGLATQFSSVGHYDLAD MMAR_0906|M.marinum_M VVLEAHGDKNGDGFTLMPRNSLNEPALANLAMGGGQSTNVYCGGVYDLRA MUL_0659|M.ulcerans_Agy99 VVLEAHGDKNGDGFTLMPRNSLNEPALANLAMGGGQSTNVYCGGVYDLRA . *:: * *: ** :*: . * ::* Mb3561c|M.bovis_AF2122/97 GQALVITVPV-SDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGK Rv3531c|M.tuberculosis_H37Rv GQALVITVPV-SDAPYLGFQLGSMWYISLDYINHQTSLNASQAQADPDGK MAV_0629|M.avium_104 DQALLITIPV-TDAPYLGFQLGSLWYISLDYINHQTSLNNTQAQADPDGK TH_0374|M.thermoresistible__bu DQAMIITVPV-SDAPYLGFQLGSLWYISLDYINHQTSLNATQAQADPDGR Mflv_1529|M.gilvum_PYR-GCK DQALIITLPV-TDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQADPDDK Mvan_5229|M.vanbaalenii_PYR-1 DQALIITLPV-TDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQADPDGM MSMEG_5932|M.smegmatis_MC2_155 DQAMVITLPV-TDAPYLGFQLGSLWYISLDYINHQTSLNGTQAQEDPDGK MAB_4179c|M.abscessus_ATCC_199 DQAMIITVPK-SDAPYQGFQLGSLWYISLDYINHQTSLNSSQAQIDPDGN MMAR_0906|M.marinum_M DEALLVEVVVPVPPAYMGFHLSNLWGESLDYANHACSLNGFQSEPDADAR MUL_0659|M.ulcerans_Agy99 DEALLVEVVVPVPPAYMGFHLSNLWGESLDYANHACSLNGFQSEPDADAR .:*::: : ..* **:*..:* **** ** *** *:: *.* Mb3561c|M.bovis_AF2122/97 VRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDF Rv3531c|M.tuberculosis_H37Rv VRIVVAEQNPGVTNWVETLGHRRGFLQFRWQRVSRELTEADGPTVELVDF MAV_0629|M.avium_104 VRIVVAEQNPGVTNWVETVGHRKGFLQFRWQRVSRQLTEADGPTVELVDF TH_0374|M.thermoresistible__bu IRIVVSEANPGVTNWVETLGHRRGIMQFRWQRVSRPLTEADGPTVEVVDF Mflv_1529|M.gilvum_PYR-GCK IRIVVSDRNPGVTNWVETLGHRKGFLQFRWQRVSREMTAADGPTVELVHV Mvan_5229|M.vanbaalenii_PYR-1 IRIVVADRNPGVTNWVETLGHRKGFLQFRWQRVSRELTPADGPTVELVDI MSMEG_5932|M.smegmatis_MC2_155 IRIVVSDANPGVTNWCETLGHRKGYLQFRWQRLSRALTEADGPTVEVVDI MAB_4179c|M.abscessus_ATCC_199 IRMVVSNTNPGVTNWIETLGHRRAYLQFRWQRADRQLTPADGPTVEVVAV MMAR_0906|M.marinum_M IRYVIADTDPGVPNWLDTAGRLGGFLTLRWTYCD-PPSELPKASAVKVPL MUL_0659|M.ulcerans_Agy99 MRYVIADTDPGVPNWLDTAGRLGGFLTLRWTYCD-PPSELPKASAVKVPL :* *::: :***.** :* *: . : :** . : .:. * . Mb3561c|M.bovis_AF2122/97 DAIPAALPHYQHNKISEDDWRARIALRQRQIATRMLG- Rv3531c|M.tuberculosis_H37Rv DAIPAALPHYQHNKISEDDWRARIALRQRQIATRMLG- MAV_0629|M.avium_104 DAVPAKLPYYEHNKISDDEWRARIALRQQQIAARMLG- TH_0374|M.thermoresistible__bu DQVPAALPYYESNRISEEAWRARIAQRQIQIANRMLG- Mflv_1529|M.gilvum_PYR-GCK DDVASALPYHDSNTISEEDWRARIALRQKQIGERMVG- Mvan_5229|M.vanbaalenii_PYR-1 DKVAAALPYYESNTISEQDWRARIALRQKQIGERMVG- MSMEG_5932|M.smegmatis_MC2_155 DQVPEKLPYHESNKISEADWRARIALRQQQIQNRMVG- MAB_4179c|M.abscessus_ATCC_199 GDIPAKLPHYSQNQISEEGWRSRIAERQTAIGARMLG- MMAR_0906|M.marinum_M ASVRQHLPADTR-TVSVEERRRQISVRQEHVQRRYRQY MUL_0659|M.ulcerans_Agy99 ASVRQHLPADTR-TVSVEERRRQISVRQEHVQRRYRQY : ** :* * :*: ** : *