For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TAARPVKTRNEGQWALGDREPLNDTEKIKLADGPLNVRERIINVYAKQGFGSIDKSDLRGRFRWMGLYTQ REQGYDGSWTGDDNTDKIEAKYFMMRVRSDGKAMSAHTMRTLGQISTEFARDTADISDRENLQLHWIRIE DVPEIWRRLESVGLQTTEACGDCPRGIHGSPLAGDSLDEVLDPSPAIEEIVRRSLNNPEYANLPRKYKTA VSGLQDVSHETHDVAFVGVDHPEHGPGLDLWVGGGLSTNPMLAQRLGVWVPLDEVPDVWEAVTQLFRDYG YRRLRAKARLKFLVKDWGIEKFREILEQEYLNRRLIDGPAPAPVKHTIDHVGVQKIKNGLNAVGVAPIAG RVSGTTLSAVADLMEQVGSDRARWTPFQKLVILDVPDDKVDELVAGLDALGLPSRPSSWRKNTMACTGIE FCKLSFAETRVRTQTLVPELERRLADVDAQLDAPISLHLNGCPNSCARIQVADIGFKGQWIDNGDGTSVE GFQVHLGGGLGEQSGFGRKLRQHKVTSEELGDYIDRVTRRYLEGRNDGETFASWALRADEEELR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2154 | - | - | 100% (555) | sulfite reductase |
M. avium 104 | MAV_1787 | - | 0.0 | 76.94% (555) | sulfite reductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2412 | nirA | 0.0 | 77.48% (555) | ferredoxin-dependant nitrite reductase NIRA |
M. gilvum PYR-GCK | Mflv_2686 | - | 0.0 | 74.14% (553) | ferredoxin--nitrite reductase |
M. tuberculosis H37Rv | Rv2391 | nirA | 0.0 | 77.48% (555) | ferredoxin-dependent nitrite reductase NIRA |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1662c | - | 0.0 | 73.01% (552) | sulfite reductase |
M. marinum M | MMAR_3416 | nirA | 0.0 | 83.60% (555) | ferredoxin-dependent nitrite/sulphite reductase NirA |
M. smegmatis MC2 155 | MSMEG_4527 | - | 0.0 | 75.18% (552) | ferredoxin sulfite reductase |
M. thermoresistible (build 8) | TH_1443 | nirA | 0.0 | 77.55% (548) | PROBABLE FERREDOXIN-DEPENDENT NITRITE REDUCTASE NIRA |
M. ulcerans Agy99 | MUL_3652 | nirA_2 | 0.0 | 75.14% (555) | ferredoxin-dependent nitrite reductase, NirA_2 |
M. vanbaalenii PYR-1 | Mvan_3857 | - | 0.0 | 73.55% (552) | ferredoxin--nitrite reductase |
CLUSTAL 2.0.9 multiple sequence alignment Mb2412|M.bovis_AF2122/97 MSAKENPQ------MTTARP-AKARNEGQWALGHREPLNANEELKKAGNP Rv2391|M.tuberculosis_H37Rv MSAKENPQ------MTTARP-AKARNEGQWALGHREPLNANEELKKAGNP MUL_3652|M.ulcerans_Agy99 --------------MTTARP-AKPRNEGQWALGNREPFNANEELKKAGNP Mflv_2686|M.gilvum_PYR-GCK MTTAKT---------PPAKPAKRPRGEGQWALGYREPLNPNEQSKKDDNP Mvan_3857|M.vanbaalenii_PYR-1 MTTAQD---------KPVKPVKRPRGEGQWALGYREPLNPNERSKRDDNP MSMEG_4527|M.smegmatis_MC2_155 MTSSEAPAKTAEKPAPKTRPAKRPRGEGQWALGYREPLNANEQAKKDDNP MAB_1662c|M.abscessus_ATCC_199 MTTSET---------RPARP-KQQRSEGQWALGELEPLNSNEQVKKDDHP TH_1443|M.thermoresistible__bu MTEAKT--------QAKPRPARKPRSEGQWALGERDPLNPNEQFKQEDDA MAV_2154|M.avium_104 --------------MTAARP-VKTRNEGQWALGDREPLNDTEKIKLADGP MMAR_3416|M.marinum_M --------------MTTARP-AKTRNEGQWALGQLDPLNDTEQIKHDDGP :* : *.******* :*:* .*. * . . Mb2412|M.bovis_AF2122/97 LDVRERIENIYAKQGFDSIDKTDLRGRFRWWGLYTQREQGYDGTWTGDDN Rv2391|M.tuberculosis_H37Rv LDVRERIENIYAKQGFDSIDKTDLRGRFRWWGLYTQREQGYDGTWTGDDN MUL_3652|M.ulcerans_Agy99 LDVRERIENIYAKAGFDSIDKSDLRGLFRWWGLYTQREQGYDGSWTGDEN Mflv_2686|M.gilvum_PYR-GCK LNVRERIENIYAKNGFESIDKGDLRGRFRWWGLYTQRKPGYDGTWTGDEN Mvan_3857|M.vanbaalenii_PYR-1 LNVRARIENIYAQGGFDSIDKGDLRGRFRWWGLYTQRKPGYDGTWTGDEN MSMEG_4527|M.smegmatis_MC2_155 LNVRARIENIYAKNGFESIDKGDLRGRFRWWGLYTQRKPGYDGTWTGDEN MAB_1662c|M.abscessus_ATCC_199 LNVRERIETIYSKQGFDSIDKADLRGRFRWWGLYTQRKQGYDGTWTGDDN TH_1443|M.thermoresistible__bu LNVRDRIINTYAKNGFDSIDKTDLRGRFRWMGLYTQREQGYDGTWTGDEN MAV_2154|M.avium_104 LNVRERIINVYAKQGFGSIDKSDLRGRFRWMGLYTQREQGYDGSWTGDDN MMAR_3416|M.marinum_M LNVRDRILNKYAKEGFDSIEKTDLRLRFKWMGLYTQREQGYDGSWTGDEN *:** ** . *:: ** **:* *** *:* ******: ****:****:* Mb2412|M.bovis_AF2122/97 IDKLEAKYFMMRVRCDGGALSAAALRTLGQISTEFARDTADISDRQNVQY Rv2391|M.tuberculosis_H37Rv IDKLEAKYFMMRVRCDGGALSAAALRTLGQISTEFARDTADISDRQNVQY MUL_3652|M.ulcerans_Agy99 IDKLEAKYFMLRVRCDGGALSTAALRTLGAISTEFARDTADISDRENLQY Mflv_2686|M.gilvum_PYR-GCK TDMLEDEYFMLRVRSDGGALTAAALRTLGTISTEFARDTADISDRQNVQY Mvan_3857|M.vanbaalenii_PYR-1 TDMLEDSYFMLRVRSDGGALSAEALRTLGGISTEFARDTADLSDRQNVQY MSMEG_4527|M.smegmatis_MC2_155 TDMLEDEYFMLRVRCDGGALTTAALRTLGGISTEFARDTADISDRENVQY MAB_1662c|M.abscessus_ATCC_199 TDMLEDDHFMLRVRCDGGALTTQALRTIGELSTQYARDTADISDRQNVQY TH_1443|M.thermoresistible__bu ADLLEAKYFMMRVRCDGKALSAAALRTLGEISTEFARDTADISDRMNLQY MAV_2154|M.avium_104 TDKIEAKYFMMRVRSDGKAMSAHTMRTLGQISTEFARDTADISDRENLQL MMAR_3416|M.marinum_M IDKLEAKYFMMRVRSDGKPMSAQTVRVLGQISSEFGRDTADIGDRENVQF * :* .:**:***.** .::: ::*.:* :*:::.*****:.** *:* Mb2412|M.bovis_AF2122/97 HWIEVENVPEIWRRLDDVGLQTTEACGDCPRVVLGSPLAGESLDEVLDPT Rv2391|M.tuberculosis_H37Rv HWIEVENVPEIWRRLDDVGLQTTEACGDCPRVVLGSPLAGESLDEVLDPT MUL_3652|M.ulcerans_Agy99 HWIEVEKVPEIWRRLDEVGLHTTEACGDCPRVVLGSPLAGESLDEVLDPT Mflv_2686|M.gilvum_PYR-GCK HWIDVKDMPEIWRRLDEVGLQTTEACGDCPRVVLGSPLAGESLDEVIDGT Mvan_3857|M.vanbaalenii_PYR-1 HWIEVENMPEIWRRLDAVGLQTTEACGDCPRVVLGSPLAGESLDEVIDGT MSMEG_4527|M.smegmatis_MC2_155 HWIQVENMPEIWKRLDAVGLQTTEACGDCPRVVLGSPLAGESLDEVIDGT MAB_1662c|M.abscessus_ATCC_199 HWIRVEDMPEIWRRLDEVGLYTTQACGDCPRVILGSPLAGESLDEVLDPT TH_1443|M.thermoresistible__bu HWIEIENVPEIWRRLDEHGLQTTEACGDCPRALLGSPLAGESLDEVLDPT MAV_2154|M.avium_104 HWIRIEDVPEIWRRLESVGLQTTEACGDCPRGIHGSPLAGDSLDEVLDPS MMAR_3416|M.marinum_M HWLRIEDVPEIWRRLESVGLSSIEACGDCPRGIHGSPLAGDSLDEVLDPS **: ::.:****:**: ** : :******* : ******:*****:* : Mb2412|M.bovis_AF2122/97 WAIEEIVRRYIGKPDFADLPRKYKTAISGLQDVAHEINDVAFIGVNHPEH Rv2391|M.tuberculosis_H37Rv WAIEEIVRRYIGKPDFADLPRKYKTAISGLQDVAHEINDVAFIGVNHPEH MUL_3652|M.ulcerans_Agy99 WAIDEIVRRYIGKPDFADLPRKYKTAISGLQDVVHEVNDVAFIGVNHPEH Mflv_2686|M.gilvum_PYR-GCK PAVNEIVKRYIGKKEYSNLPRKFKTAISGLQDVVHEVNDVAFIGVNHPEH Mvan_3857|M.vanbaalenii_PYR-1 PAVDEIVKRYIGKPEYSNLPRKFKTAISGLQDVVHEVNDVAFIGVNHPEH MSMEG_4527|M.smegmatis_MC2_155 PAIDEIVRRYIGKPEYSNLPRKFKTAISGLQDVVHEVNDVAFIGVNHPEH MAB_1662c|M.abscessus_ATCC_199 WAIDEITRRYIGNKEYANLPRKFKTAISGLQDVVHEINDVAFVGVVHPEH TH_1443|M.thermoresistible__bu PALDEIVRRYIGNPEYSNLPRKYKTAISGLQDVAHEVNDVAFIGVNHPEH MAV_2154|M.avium_104 PAIEEIVRRSLNNPEYANLPRKYKTAVSGLQDVSHETHDVAFVGVDHPEH MMAR_3416|M.marinum_M PAIDEIIRRFLGNPDYANLPRKYKSAISGLQDVSHETHDVAFVGVNHPEH *::** :* :.: ::::****:*:*:****** ** :****:** **** Mb2412|M.bovis_AF2122/97 GPGLDLWVGGGLSTNPMLAQRVGAWVPLGEVPEVWAAVTSVFRDYGYRRL Rv2391|M.tuberculosis_H37Rv GPGLDLWVGGGLSTNPMLAQRVGAWVPLGEVPEVWAAVTSVFRDYGYRRL MUL_3652|M.ulcerans_Agy99 GPGLDLWVGGGLSTNPMLAKRVGAWVPLEEVPEVWAAVTSVFRDYGYRRL Mflv_2686|M.gilvum_PYR-GCK GPGFDLWVGGGLSTNPMLGQRVGAWVPLDEVPDVWEGVVSVFRDYGYRRL Mvan_3857|M.vanbaalenii_PYR-1 GPGFDLWVGGGLSTNPMLAQRVGVWVPLDEVPDVWEGVVSVFRDYGYRRL MSMEG_4527|M.smegmatis_MC2_155 GPGFDLWVGGGLSTNPMLAQRVGVWVPLDEVPDVWEGVVSIFRDYGYRRL MAB_1662c|M.abscessus_ATCC_199 GPGLDIWVGGGLSTNPMLAQRLGAWVPLDEVPDVWEGVVGIFRDYGYRRL TH_1443|M.thermoresistible__bu GPGLDLWVGGGLSTNPMLAQRVGAWVPLDEVPDVWEAVTAVFRDYGYRRL MAV_2154|M.avium_104 GPGLDLWVGGGLSTNPMLAQRLGVWVPLDEVPDVWEAVTQLFRDYGYRRL MMAR_3416|M.marinum_M GPGMDLWVGGGLSTNPMMAQRVGVWVPLDEVPDVWEAVTQVFRDYGYRRL ***:*:***********:.:*:*.**** ***:** .*. :********* Mb2412|M.bovis_AF2122/97 RAKARLKFLIKDWGIAKFREVLETEYLKRPLIDGPAPEPVKHPIDHVGVQ Rv2391|M.tuberculosis_H37Rv RAKARLKFLIKDWGIAKFREVLETEYLKRPLIDGPAPEPVKHPIDHVGVQ MUL_3652|M.ulcerans_Agy99 RSKARLKFLIKDWGIEKFREVLETEYLKRPLIDGPAPEPAKHPIDHVGVQ Mflv_2686|M.gilvum_PYR-GCK RAKARLKFLIKDWGVEKFRQVLEEEYLKRPLIDGPAPEPVTRPIDHVGVQ Mvan_3857|M.vanbaalenii_PYR-1 RSKARLKFLIKDWGAQKFREVLETEYLHRPLLDGPAPEPVTRPIDHVGVQ MSMEG_4527|M.smegmatis_MC2_155 RSKARLKFLIKDWGVEKFREVLETEYLKRPLIDGPAPEPVTRPIDHVGVQ MAB_1662c|M.abscessus_ATCC_199 RSKARLKFLVKDWGVAKFREILETEYLKRPLIDGPAPVPPTHPIDHVGVQ TH_1443|M.thermoresistible__bu RSKARLKFLIKDWGVEKFREVLETEYLKRPLIDGPAPEPVKHPIDHVGVQ MAV_2154|M.avium_104 RAKARLKFLVKDWGIEKFREILEQEYLNRRLIDGPAPAPVKHTIDHVGVQ MMAR_3416|M.marinum_M RAKARIKFLVKDWGVEKFREVMETEYLKRKLIDGPAPEPIKHPIDHVGVQ *:***:***:**** ***:::* ***:* *:***** * .:.******* Mb2412|M.bovis_AF2122/97 RLKNGLNAVGVAPIAGRVSGTILTAVADLMARAGSDRIRFTPYQKLVILD Rv2391|M.tuberculosis_H37Rv RLKNGLNAVGVAPIAGRVSGTILTAVADLMARAGSDRIRFTPYQKLVILD MUL_3652|M.ulcerans_Agy99 RLKNGHNAVGVSPIAGRVSGTILTAVAELAERAGSDRIRFTPYQKLVILD Mflv_2686|M.gilvum_PYR-GCK KLKNGLNAVGVAPIAGRVSGTILTKVADLAEAAGSDRIRFTPYQKLIVLD Mvan_3857|M.vanbaalenii_PYR-1 KLKNGLNAVGVAPIAGRVSGTILTKVADLAEAAGSDRIRFTPYQKLIILD MSMEG_4527|M.smegmatis_MC2_155 KLKNGLNAVGVAPIAGRVSGTILTKVADLAEAAGSDRIRFTPYQKLIILD MAB_1662c|M.abscessus_ATCC_199 RLKNGLNAIGISAIAGRVSGTILSAIADLAEKAGSNRVALTPHQKLIILD TH_1443|M.thermoresistible__bu KLKNGLNAVGIAPIAGRVSGTILQAVADLMAQAGSDRARFTPYQKLIVLD MAV_2154|M.avium_104 KIKNGLNAVGVAPIAGRVSGTTLSAVADLMEQVGSDRARWTPFQKLVILD MMAR_3416|M.marinum_M KIKNGLNAVGVAAIAGRVTGTTLQAVADLMERVGSDRARFSPFQKLIILD ::*** **:*::.*****:** * :*:* .**:* :*.***::** Mb2412|M.bovis_AF2122/97 IPDALLDDLIAGLDALGLQSRPSHWRRNLMACSGIEFCKLSFAETRVRAQ Rv2391|M.tuberculosis_H37Rv IPDALLDDLIAGLDALGLQSRPSHWRRNLMACSGIEFCKLSFAETRVRAQ MUL_3652|M.ulcerans_Agy99 IPDDKLDETIAGLQALGLRAQPSHWRRNLMACSGIEFCKLSFAETRVRAQ Mflv_2686|M.gilvum_PYR-GCK VPDDKLDELRAGLDALGLPSTPSHWRRNLMACTGIEFCKLSFAETRSRSQ Mvan_3857|M.vanbaalenii_PYR-1 VADENVAKLVEQLDALGLPSTPSHWRRNLMACTGIEFCKLSFAETRSRSQ MSMEG_4527|M.smegmatis_MC2_155 VPDDKIDELRAGLDALGLPSTPSHWRRNLMACTGIEFCKLSFAETRKRAQ MAB_1662c|M.abscessus_ATCC_199 VSDDELPALEAGLNALGLPSRPSHWRKNLLACTGIEYCKLSFTETRVRAQ TH_1443|M.thermoresistible__bu IADDKLDEFTAGLDRLGLQWQPSHWRRNLMACTGIEFCKLSFTETRVRAQ MAV_2154|M.avium_104 VPDDKVDELVAGLDALGLPSRPSSWRKNTMACTGIEFCKLSFAETRVRTQ MMAR_3416|M.marinum_M VPDDKVDELVTGLDKLGLPSKPSGWRKNTMACTGIEFCKLSFAETRVRAQ :.* : *: *** ** **:* :**:***:*****:*** *:* Mb2412|M.bovis_AF2122/97 HLVPELERRLEDINSQLDVPITVNINGCPNSCARIQIADIGFKGQMIDDG Rv2391|M.tuberculosis_H37Rv HLVPELERRLEDINSQLDVPITVNINGCPNSCARIQIADIGFKGQMIDDG MUL_3652|M.ulcerans_Agy99 SLVPELEERLDDINSTLDVPVAVNINGCPNSCARIQVADIGFKGQMVDDG Mflv_2686|M.gilvum_PYR-GCK VLVPELEKRLEDINAQLDVPVTININGCPNSCARIQVADIGFKGQMVDDG Mvan_3857|M.vanbaalenii_PYR-1 VLVPELEKRLDDINAQLDVPVTININGCPNSCARIQVADIGFKGQMVDDG MSMEG_4527|M.smegmatis_MC2_155 VLVPELEKRLDDINAQLDVPITVNINGCPNSCARIQVADIGFKGQMVDDG MAB_1662c|M.abscessus_ATCC_199 SLVPELEKRLDDLNAQIDTPVTINMNGCPNSCARSQTADIGFKGQMVDDG TH_1443|M.thermoresistible__bu SLVPELEKRLEDINARLDVPITVNINGCPNSCARIQVADIGFKGMIVDDG MAV_2154|M.avium_104 TLVPELERRLADVDAQLDAPISLHLNGCPNSCARIQVADIGFKGQWIDNG MMAR_3416|M.marinum_M SLVPELEERMADVESKIDVPITLHINGCPNSCARIQVADIGFKGQWIDDG ******.*: *::: :*.*:::::********* * ******* :*:* Mb2412|M.bovis_AF2122/97 HGGSVEGFQVHLGGHLGLDAGFGRKLRQHKVTSDELGDYIDRVVRNFVKH Rv2391|M.tuberculosis_H37Rv HGGSVEGFQVHLGGHLGLDAGFGRKLRQHKVTSDELGDYIDRVVRNFVKH MUL_3652|M.ulcerans_Agy99 AGGQVEGFQVHLGGSLGLDSGFGRKLRQHKVTSDELGDYIDRVVRNFVKN Mflv_2686|M.gilvum_PYR-GCK DG-PEEGFQVHLGGSLGLDSGFGRKLRQHKVVATELGDYIERVVRNFVKQ Mvan_3857|M.vanbaalenii_PYR-1 NG-PEEGFQVHLGGSLGLDSGFGRKLRQHKVLATELGDYIERVVRNFVKQ MSMEG_4527|M.smegmatis_MC2_155 NG-PEEGFQVHLGGSLGLDSGFGRKLRQHKVLSSELGDYIERVVRNFVKQ MAB_1662c|M.abscessus_ATCC_199 NGNSVEGFQVHLGGSLGLDSGFGRKLRQHKVTSTELGDYIDRVVRNFVAQ TH_1443|M.thermoresistible__bu DG-PEEGFQVHLGGGLGLDSGFGRKLRQHRVLSSELGDYIDRVVRNFVKQ MAV_2154|M.avium_104 DGTSVEGFQVHLGGGLGEQSGFGRKLRQHKVTSEELGDYIDRVTRRYLEG MMAR_3416|M.marinum_M EGNSVEGFQVHLGGGLGEQSGFGRKLRQHKVTSDELGDYIDRVTRKFLDQ * ********* ** ::*********:* : ******:**.*.:: Mb2412|M.bovis_AF2122/97 RSEGERFAQWVIRAEEDDLR Rv2391|M.tuberculosis_H37Rv RSEGERFAQWVIRAEEDDLR MUL_3652|M.ulcerans_Agy99 RAAGERFAQWAIRAEEDDLR Mflv_2686|M.gilvum_PYR-GCK REQGERFATWALRADDADLR Mvan_3857|M.vanbaalenii_PYR-1 REDGERFATWALRADEADLR MSMEG_4527|M.smegmatis_MC2_155 REDGERFAQWAVRADEADLR MAB_1662c|M.abscessus_ATCC_199 RTDGERFAQWAVRAEEADLR TH_1443|M.thermoresistible__bu REDGERFATWALRADEADLR MAV_2154|M.avium_104 RNDGETFASWALRADEEELR MMAR_3416|M.marinum_M REEGERFANWALRADEADLR * ** ** *.:**:: :**