For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLVVVLGGLTGWLAYRGYQSHQADEQRNMFVQVGRQGALNLTTIDWQHADKDVQRILDSATGTFYDDFQK RSGPFIEVVKKAQSKSEGKVTEAGLESRTENEGQVLVAVTVNTSNAGAPEQEPRSWRMRITVQKVNEEAK VSKVEFVP
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1969 | - | - | 100% (148) | hypothetical protein MAV_1969 |
M. avium 104 | MAV_2538 | - | 9e-57 | 70.95% (148) | hypothetical protein MAV_2538 |
M. avium 104 | MAV_2070 | - | 8e-47 | 60.81% (148) | hypothetical protein MAV_2070 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1398c | - | 4e-29 | 39.60% (149) | hypothetical protein Mb1398c |
M. gilvum PYR-GCK | Mflv_2107 | - | 2e-61 | 73.29% (146) | hypothetical protein Mflv_2107 |
M. tuberculosis H37Rv | Rv1972 | - | 2e-40 | 53.38% (148) | mce associated membrane protein |
M. leprae Br4923 | MLBr_02597 | - | 3e-05 | 27.88% (104) | hypothetical protein MLBr_02597 |
M. abscessus ATCC 19977 | MAB_1004c | - | 2e-12 | 27.08% (144) | hypothetical protein MAB_1004c |
M. marinum M | MMAR_4057 | - | 4e-54 | 65.07% (146) | Mce associated membrane protein |
M. smegmatis MC2 155 | MSMEG_5208 | - | 2e-46 | 58.22% (146) | hypothetical protein MSMEG_5208 |
M. thermoresistible (build 8) | TH_0481 | - | 2e-48 | 65.00% (140) | PROBABLE CONSERVED MCE ASSOCIATED MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_3924 | - | 2e-53 | 64.38% (146) | Mce associated membrane protein |
M. vanbaalenii PYR-1 | Mvan_4598 | - | 3e-58 | 71.23% (146) | hypothetical protein Mvan_4598 |
CLUSTAL 2.0.9 multiple sequence alignment MAV_1969|M.avium_104 -------------------------------------------------- Mflv_2107|M.gilvum_PYR-GCK MADD--------------------AAAPEGE-------LTDAQEREASTA Mvan_4598|M.vanbaalenii_PYR-1 MADEKRPAEES----------TTEVDAPAGSPDATPAPVADPAEMESDTA MMAR_4057|M.marinum_M MSDS---------------------TTLEEQPEPAEVVEPEGESGQAGVP MUL_3924|M.ulcerans_Agy99 MSDS---------------------TTLEEQPEPAEVVEPEGESGQAGVP MSMEG_5208|M.smegmatis_MC2_155 MAD-------------------------DDSP------------------ TH_0481|M.thermoresistible__bu MVDG----------------------NVAGAED----------------- Rv1972|M.tuberculosis_H37Rv MSVA---------------------------------------------- Mb1398c|M.bovis_AF2122/97 MAETTEPPSDAGTSQADAMALAAEAEAAEAEALAAAARARARAARLKREA MAB_1004c|M.abscessus_ATCC_199 -------------------------MVTMTKEDVDSTNDADTDTADDKET MLBr_02597|M.leprae_Br4923 -------------------------------------------------- MAV_1969|M.avium_104 -------------------------------------------------- Mflv_2107|M.gilvum_PYR-GCK AEP---TDTDIDTEDTE---DADAPEAVEDDSVDADVDETDATPATGAMS Mvan_4598|M.vanbaalenii_PYR-1 EDSEVIEEYDLEAEDSE---ADEAEASEADEAEASEADEAEAAPRS-PMS MMAR_4057|M.marinum_M EAQPRDEDQDETADETQDETQEDADADPEAGEDDAQASDGEQESPKPAPS MUL_3924|M.ulcerans_Agy99 EAQPRDEDQDETADET----QEDADADPEAGEDDAQASDGEQESPKPAPS MSMEG_5208|M.smegmatis_MC2_155 ----------------------DAVESTDAEEAEEAAEDGTPDVKEPL-S TH_0481|M.thermoresistible__bu -----------VAEAEDVAEAEDVAEAEDVAGAEDVAGSASPSDDRRSFP Rv1972|M.tuberculosis_H37Rv ---------------------VDSDAEDDAVSEIAEAAGVSPAPAKPSMS Mb1398c|M.bovis_AF2122/97 LAMAPAEDENVPEEYADWEDAEDYDDYDDYEAADQEAARSASWRRRLRVR MAB_1004c|M.abscessus_ATCC_199 VDSAAETDSEIAEDAAS----TDTDAASSADSDSETASSDEDGDAAKGAS MLBr_02597|M.leprae_Br4923 -----------------------MSPRRKFQAGEGLLLVSHTVASQRRWG MAV_1969|M.avium_104 ----------MLVVV-LGGLTGWLAYRGYQSHQADEQRN---MFVQVGRQ Mflv_2107|M.gilvum_PYR-GCK HIKLALIAGLVGVLA-LAGLAGWLGYQTYESHQAEEQRN---LFVQVGRQ Mvan_4598|M.vanbaalenii_PYR-1 HVKVALIAGLVGVLA-LAGLTAWMGYRTYEANRDEHRRE---LFLQVGRQ MMAR_4057|M.marinum_M KVRLAIVVGLAAVVA-MAALASWFGFHAYQSHQADQQRK---LYVQVARQ MUL_3924|M.ulcerans_Agy99 KVRLAIVVGLAAVVA-MAALASWFGFHAYQSHQADQQRK---LYVQVARQ MSMEG_5208|M.smegmatis_MC2_155 RVALGARVGIAVVVV-LAVLTGWLGYRAYQSYGVEQQRE---AFLQAGRQ TH_0481|M.thermoresistible__bu AGWVLLAGGLGVLAL-CLTLVGWLGYRAYDSRVDEAQRQ---LFLQVGRQ Rv1972|M.tuberculosis_H37Rv APRRMLLFGLVVVVA-LAVLLCCWGFRVQRARHAQDQRG---HFLQAARQ Mb1398c|M.bovis_AF2122/97 LPRLSTIAMAAAVVI-ICGFTGLSGYIVWQHHEATERQQRAAAFAAGAKQ MAB_1004c|M.abscessus_ATCC_199 WVRYAALGAVAAIMVGALVFSGIFGWKVWQQHQIDAAGE---QALAVAIP MLBr_02597|M.leprae_Br4923 LPLAATFAALVMVAAITASTLMSISHASRELAVAKDQQV-----LSYVKW : . MAV_1969|M.avium_104 GALNLTTIDWQHADKDVQRILDSATGTFYDDFQKRSGPFIEVVKKAQSKS Mflv_2107|M.gilvum_PYR-GCK GALNLTTINWESAEADVQRILDSATGTFYDDFQQRAEPFVQVVKQAQSKS Mvan_4598|M.vanbaalenii_PYR-1 GALNLTTIDWQNAEADVQRILDSATGTFYDDFQQRAQPFVEVVKQAQSKS MMAR_4057|M.marinum_M GAINLTTIDWEHVDADIERILNSATGTFYDDFQRRSKPFIQVVQHFQSKS MUL_3924|M.ulcerans_Agy99 GAINLTTIDWEHVDADIERILNSATGTFYDDFQRRSKPFIKVVQHFQSKS MSMEG_5208|M.smegmatis_MC2_155 AATALTNVGWETADADVQRVLDSASGTFFDDFQKRAESYLEVVKQVQSKS TH_0481|M.thermoresistible__bu AAINLTTIDHTRAEADVQRIIDGSTGGFREDFESRSAPFIEVVRQAESKS Rv1972|M.tuberculosis_H37Rv CALNLTTIDWRNAEADVRRILDGATGEFYNDFAQRSQPFVEVLRHAKAST Mb1398c|M.bovis_AF2122/97 GVINMNSLDFNKAKEDVARVIDSSTGEFRDDFQQRAADFTKVVEQSKVVT MAB_1004c|M.abscessus_ATCC_199 YTETLTSIDSNDIDESFRKILNGATGDLKKDFTPASVQLRQLLLDNKAAS MLBr_02597|M.leprae_Br4923 FMTQFTTLDPYHANDYVARILAQATGDFAKQYNEKVNEILLQVAQAEPAT :..:. . . ::: ::* : .:: : . : : MAV_1969|M.avium_104 EGKVTEAGLESRTEN-EGQVLVAVTVNTSNAGAPEQEPRSWRMRITVQKV Mflv_2107|M.gilvum_PYR-GCK EGTIAEAGLESATDS-EGQVLVAVTVRTTNAGTPEQQPRAWRMRISVQEI Mvan_4598|M.vanbaalenii_PYR-1 VGTVAEAGLESAGAN-EAQVLVAVTVKTSNAGAPEQEPRAWRMRISVEKI MMAR_4057|M.marinum_M VGTITAAALESESDD-AAQVLVAVSVKTTTAGAPEQRPRAWRMRITVQQV MUL_3924|M.ulcerans_Agy99 VGTITAAALESESDD-AAQVLVAVSVKTTTAAAPEQRPRAWRMRITVQQV MSMEG_5208|M.smegmatis_MC2_155 EGTITSSALESVDDN-TAKVLVSVTVKSTNAGVPEQAPQFWRMRLTVEEN TH_0481|M.thermoresistible__bu EGTVTEAGLESMDDD-EGQVLVAVSVRTTTPADPEPQPRSWRMRITVQKD Rv1972|M.tuberculosis_H37Rv VGTITEAGLQTQTAD-TAQALVAVSVQTSNAGEADPVPRAWRMRITVQRV Mb1398c|M.bovis_AF2122/97 EGTVNATAVESMNEH-SAVVLVAATSRVTNSAGAKDEPRAWRLKVTVTEE MAB_1004c|M.abscessus_ATCC_199 HGKVVNSAIQYKSTN-KVVLLMMVDQSITNTQRPDPRVDKSRMKITMEKI MLBr_02597|M.leprae_Br4923 -GTVLDAGVERWNDDGSANVLVATEVTSKSPDEKQVLENTNRWTATATRE *.: :.:: *: . ... . * : . MAV_1969|M.avium_104 NEEAKVSKVEFVP Mflv_2107|M.gilvum_PYR-GCK DGDAKVSNVEFVP Mvan_4598|M.vanbaalenii_PYR-1 GDDAKVSNVEFVP MMAR_4057|M.marinum_M GDEAKVANVEFVP MUL_3924|M.ulcerans_Agy99 GDEAKVANVEFVP MSMEG_5208|M.smegmatis_MC2_155 AGQAKVSDVEFIE TH_0481|M.thermoresistible__bu HDEAKVSNVEFVP Rv1972|M.tuberculosis_H37Rv GDRVKVSDVGFVP Mb1398c|M.bovis_AF2122/97 GGQYKMSKVEFVP MAB_1004c|M.abscessus_ATCC_199 DGRWLASKLEYL- MLBr_02597|M.leprae_Br4923 GNQWKISNLLQVI :.: :