For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSNTSGLRDVAIVGVGATDYYKRGGSLPKSITELAGEAILAACEDAGIPVTDIDGFAYYSGASAGYTEKM DTADFVEALGIPEVRFTAALTSGGGGSAGAIGLARAAIVAGDASVVVTVMALQQAKQRLGSVFSAMDPDP INSFLQPSGLFGPGQLMSVLARRHMHLYGTRREAFAEIALSTRTNALNRPKAMHRQPLTLDDYFNARMIA EPLCLYDFCQETDGAVAVITTSMERAKDLKQPPVPVVAAAHGGVRDWGRAFAWMGMPDEYFASSGNAPIA KRLYEQAGVGPADIDVALLYDHFSPMVLMQLEDYGFCDKGEGGAFVESGAIRFGSGSIPVNTHGGQLSEA YIIGMTHIVEGVEQMRGTAINQVKDAELALITGGPASLPVSGLILGKAA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1918 | - | - | 100% (399) | thiolase |
M. avium 104 | MAV_2630 | - | 0.0 | 93.80% (387) | thiolase |
M. avium 104 | MAV_0477 | - | 2e-85 | 44.92% (394) | lipid-transfer protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3570c | ltp2 | 5e-77 | 42.12% (406) | lipid-transfer protein |
M. gilvum PYR-GCK | Mflv_1513 | - | 4e-77 | 41.31% (397) | lipid-transfer protein |
M. tuberculosis H37Rv | Rv3540c | ltp2 | 5e-77 | 42.12% (406) | lipid-transfer protein |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0618 | - | 2e-78 | 41.31% (397) | lipid-transfer protein |
M. marinum M | MMAR_5027 | ltp2_1 | 2e-76 | 41.13% (406) | acetyl-CoA acetyltransferase (PaaJ-like), Ltp2_1 |
M. smegmatis MC2 155 | MSMEG_5990 | - | 1e-77 | 41.31% (397) | lipid-transfer protein |
M. thermoresistible (build 8) | TH_4616 | - | 0.0 | 87.41% (397) | PUTATIVE putative nonspecific lipid-transfer protein |
M. ulcerans Agy99 | MUL_4101 | ltp2_1 | 9e-77 | 41.13% (406) | lipid-transfer protein |
M. vanbaalenii PYR-1 | Mvan_5253 | - | 3e-77 | 41.06% (397) | lipid-transfer protein |
CLUSTAL 2.0.9 multiple sequence alignment MAB_0618|M.abscessus_ATCC_1997 MTGLSGR--SAIAGIGATDFSKKSG---RSELRLAAEAVLDALDDAGLSP MSMEG_5990|M.smegmatis_MC2_155 MTGLSGK--AAIAGIGATDFSKNSG---RSELRLAAECVLDALDDAGLEP Mflv_1513|M.gilvum_PYR-GCK --MLSGK--AAIAGIGATDFSKNSG---RSELRLAAEAVLDALDDAGLTT Mvan_5253|M.vanbaalenii_PYR-1 --MLSGK--AAIAGIGATDFSKNSG---RSELRLAAEAVLDALDDAGLTP Mb3570c|M.bovis_AF2122/97 --MLSGQ--AAIVGIGATDFSKNSG---RSELRLAAEAVLDALADAGLSP Rv3540c|M.tuberculosis_H37Rv --MLSGQ--AAIVGIGATDFSKNSG---RSELRLAAEAVLDALADAGLSP MMAR_5027|M.marinum_M --MLSGK--AAIVGIGATDFSKNSG---RSELRLAAEAVRDALDDAGLSP MUL_4101|M.ulcerans_Agy99 --MLSGK--AAIVGIGATDFSKNSG---RSELRLAAEAVRDALDDAGLSP MAV_1918|M.avium_104 MSNTSGLRDVAIVGVGATDYYKRGGSLPKSITELAGEAILAACEDAGIPV TH_4616|M.thermoresistible__bu -VDSNGLRDVAIVGVGATPFYKRGGSLPKTIVELAGEAIIAACEDAGLPV .* **.*:*** : *..* :: .**.*.: * ***: MAB_0618|M.abscessus_ATCC_1997 SDVDGLVTFT------MDSNLETAVARATGIGELKFFSQIGYGGGAAAAT MSMEG_5990|M.smegmatis_MC2_155 SDVDGLVTFT------MDSNQETAVARSTGIGELKFFSQIGYGGGAAAAT Mflv_1513|M.gilvum_PYR-GCK ADVDGLVTFS------MDSNLETAVARSTGIGELKFFSQIGYGGGAAAAT Mvan_5253|M.vanbaalenii_PYR-1 SDVDGLVTFT------MDSNLETAVARSTGIGDLTFFSQIGYGGGAAAAT Mb3570c|M.bovis_AF2122/97 TDVDGLTTFT------MDTNTEIAVARAAGIGELTFFSKIHYGGGAACAT Rv3540c|M.tuberculosis_H37Rv TDVDGLTTFT------MDTNTEIAVARAAGIGELTFFSKIHYGGGAACAT MMAR_5027|M.marinum_M ADVDGLTTFT------MDTNTEIAVARAAGIGELKFFSKIHYGGGAACAT MUL_4101|M.ulcerans_Agy99 ADVDGLTTFT------MDTNTEIAVARAAGIGELKFFSKIHYGGGAACAT MAV_1918|M.avium_104 TDIDGFAYYSGASAGYTEKMDTADFVEALGIPEVRFTAALTSGGGGSAGA TH_4616|M.thermoresistible__bu HDIDGFAYYSGANAGYTDKMDTADFMETLGIPEVRFTAALTSGGGGSAGA *:**:. :: :. . .: ** :: * : : ***.:..: MAB_0618|M.abscessus_ATCC_1997 VQQAALAVAAGVAEVVVAYRAFNERSEFRFGQVMTGLSSTADSRGVEYSW MSMEG_5990|M.smegmatis_MC2_155 VQQAALAVATGVAEVVVAYRAFNERSEFRFGQVMTGLTTNADSRGVEYSW Mflv_1513|M.gilvum_PYR-GCK VQQAALAVATGVAEVVVAYRAFNERSEHRFGQVMTGLTVNADSRGVEYSW Mvan_5253|M.vanbaalenii_PYR-1 VQQAALAVATGVAEVVVAYRAFNERSEHRFGQVMTGLTVNADSRGVEYSW Mb3570c|M.bovis_AF2122/97 VQHAAMAVATGVADVVVAYRAFNERSGMRFGQVQTRLTENADSTGVDNSF Rv3540c|M.tuberculosis_H37Rv VQHAAMAVATGVADVVVAYRAFNERSGMRFGQVQTRLTENADSTGVDNSF MMAR_5027|M.marinum_M VQHAAMAVATGIADVVVAYRAFNERSGMRFGQVQTRLTENADSTGVDNSF MUL_4101|M.ulcerans_Agy99 VQHAAMAVATGIADVVVAYRAFNERSDMRFGQVQTRLTENADSTGVDNSF MAV_1918|M.avium_104 IGLARAAIVAGDASVVVTVMALQQ-AKQRLGSVFSAMDPDP-----INSF TH_4616|M.thermoresistible__bu IGLARAAIVAGDASVVVTVMALQQ-AKQRLGSVFSAMERDP-----INSF : * *:.:* *.***: *::: : *:*.* : : . *: MAB_0618|M.abscessus_ATCC_1997 SYPHGLSTPAASVAMIARRYMHEYGATSADFGAVSVADRKHAATNPKAFF MSMEG_5990|M.smegmatis_MC2_155 SYPHGLSTPAASVAMIARRYMHEYGATSADFGVVSVADRKHAANNPKAHF Mflv_1513|M.gilvum_PYR-GCK SYPHGLSTPAASVAMIAQRYMHEFGATSADFGVISVADRKHAANNPKAHF Mvan_5253|M.vanbaalenii_PYR-1 SYPHGLSTPAASVAMIARRYMHEYGATSADFGAVSVADRKHAATNPKAHF Mb3570c|M.bovis_AF2122/97 SYPHGLSTPAAQVAMIARRYMHLSGATSRDFGAVSVADRKHAANNPKAYF Rv3540c|M.tuberculosis_H37Rv SYPHGLSTPAAQVAMIARRYMHLSGATSRDFGAVSVADRKHAANNPKAYF MMAR_5027|M.marinum_M SYPHGLSTPAAQVAMIAKRYMHLSGASSRDFGAVSVADRKHAAKNPKAYF MUL_4101|M.ulcerans_Agy99 SYPHGLSTPAAQVAMIAKRYMHLSGASSRDFGAVSVADRKHAAKNPKAYF MAV_1918|M.avium_104 LQPSGLFGPGQLMSVLARRHMHLYGTRREAFAEIALSTRTNALNRPKAMH TH_4616|M.thermoresistible__bu LQPSGLFGPGQLMSVLARRHMHLYGTRREAFAEIAISTRANALNRPNAMY * ** *. ::::*:*:** *: *. :::: * :* ..*:* . MAB_0618|M.abscessus_ATCC_1997 YGKPITIEDHQNSRMIADPVRLLDCCQESDGGVAIVVTTPERAKDLKNRP MSMEG_5990|M.smegmatis_MC2_155 YGKPITIEDHQNSRWIAEPLRLLDCCQETDGGVAIVVTTPERAKDLKHRP Mflv_1513|M.gilvum_PYR-GCK YGKPITIEDHQNSRWIAEPLRLLDCCQETDGGVAIVVTTPERARDLKHRP Mvan_5253|M.vanbaalenii_PYR-1 YGKPITIEDHQNSRWIAEPLRLLDCCQETDGGVAIVVTTPERAKDLRHRP Mb3570c|M.bovis_AF2122/97 YGKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAARARDLKQRP Rv3540c|M.tuberculosis_H37Rv YGKPITIEDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAARARDLKQRP MMAR_5027|M.marinum_M YQKPITIDDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAERARDLQQRP MUL_4101|M.ulcerans_Agy99 YQKPITIDDHQNSRWIAEPLRLLDCCQETDGAVAIVVTSAERARDLQQRP MAV_1918|M.avium_104 R-QPLTLDDYFNARMIAEPLCLYDFCQETDGAVAVITTSMERAKDLKQPP TH_4616|M.thermoresistible__bu R-EPLTLENYFNARMIAEPLCLYDFCLETDGAVAVITTSMDRARDLRQPP :*:*:::: *:* **:*: * * * *:**.**::.*: **:**:: * MAB_0618|M.abscessus_ATCC_1997 VIIEAAAQGSGEDQFTMYSYYRDELG-LPEMG--LVGRQLWDQSGLTPND MSMEG_5990|M.smegmatis_MC2_155 VTIEAAAQGSGADQFTMYSYYRDELG-LPEMG--LVGRQLWQQSGLTPDD Mflv_1513|M.gilvum_PYR-GCK AIIEAAAQGAGADQFTMYSYYREELG-LPEMG--LVGRQLWAQSGLTPQD Mvan_5253|M.vanbaalenii_PYR-1 AVIEAAAQGAGADQFTMYSYYRDELG-LPEMG--LVGRQLWEQSGLSPED Mb3570c|M.bovis_AF2122/97 VVIEAAAQGCSPDQYTMVSYYRPELDGLPEMG--LVGRQLWAQSGLTPAD Rv3540c|M.tuberculosis_H37Rv VVIEAAAQGCSPDQYTMVSYYRPELDGLPEMG--LVGRQLWAQSGLTPAD MMAR_5027|M.marinum_M AIIEAASQGSSPDQYTMVSYYRPELDGLPEMG--LVGQQLWQQSGLKPTD MUL_4101|M.ulcerans_Agy99 AIIEAASQGSSPDQYTMVSYYRPELDGLPEMG--LVGQQLWQQSGLKPTD MAV_1918|M.avium_104 VPVVAAAHGGVRDWGRAFAWMGMPDEYFASSGNAPIAKRLYEQAGVGPAD TH_4616|M.thermoresistible__bu VPVIAAAHGGVRDWGRAFAWMGMADDYFASSGNRPIADRLYRQADITADD . : **::* * :: :.. * :. :*: *:.: . * MAB_0618|M.abscessus_ATCC_1997 IQTAILYDHFTPYTLLQLEELGFCGKGEAKDFIANGAIELG-GKLPINTH MSMEG_5990|M.smegmatis_MC2_155 IQTAILYDHFTPYTLLQLEELGFCGKGEAKDFIAGGAIEIG-GKLPINTH Mflv_1513|M.gilvum_PYR-GCK IQTAVLYDHFTPYTLIQLEELGFCGKGEAKDFIAGGAIEIG-GRLPINTH Mvan_5253|M.vanbaalenii_PYR-1 IQTAILYDHFTPYTLIQLEELGFCGKGEAKDFIAGGAIEIG-GRLPINTH Mb3570c|M.bovis_AF2122/97 VQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGAIEVG-GRLPINTH Rv3540c|M.tuberculosis_H37Rv VQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGAIEVG-GRLPINTH MMAR_5027|M.marinum_M IQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGAIELG-GRLPINTH MUL_4101|M.ulcerans_Agy99 IQTAVLYDHFTPFTLIQLEELGFCGKGEAKDFIADGAIELG-GRLPINTH MAV_1918|M.avium_104 IDVALLYDHFSPMVLMQLEDYGFCDKGEGGAFVESGAIRFGSGSIPVNTH TH_4616|M.thermoresistible__bu IDVALLYDHFTPMVLMQLEDYGFCGKGEGGAFVESGAIRYDGGAIPVNPH ::.*:*****:* .*:***: ***.***. *: .***. . * :*:*.* MAB_0618|M.abscessus_ATCC_1997 GGQLGEAYIHGMNGIAEGVRQLRGTSVNQVPNVEHVLVTAG-TGVPTSGL MSMEG_5990|M.smegmatis_MC2_155 GGQLGEAYIHGMNGIAEGVRQLRGTSVNQVEGVEHVLVTAG-TGVPTSGL Mflv_1513|M.gilvum_PYR-GCK GGQLGEAYIHGMNGIAEGVRQLRGTSVNQVPDVEHVLVTAG-TGVPTSGL Mvan_5253|M.vanbaalenii_PYR-1 GGQLGEAYIHGMNGIAEGVRQLRGTSVNQVPDVEHVLVTAG-TGVPTSGL Mb3570c|M.bovis_AF2122/97 GGQLGEAYIHGMNGIAEGVRQLRGTSVNPVAGVEHVLVTAG-TGVPTSGL Rv3540c|M.tuberculosis_H37Rv GGQLGEAYIHGMNGIAEGVRQLRGTSVNPVAGVEHVLVTAG-TGVPTSGL MMAR_5027|M.marinum_M GGQLGEAYIHGMNGIAEGVRQLRGTSVNPVPDVEHVLVTAG-TGVPTSGL MUL_4101|M.ulcerans_Agy99 GGQLGEAYIHGMNGIAEGVRQLRGTSVNPVPDVEHVLVTAG-TGVPTSGL MAV_1918|M.avium_104 GGQLSEAYIIGMTHIVEGVEQMRGTAINQVKDAELALITGGPASLPVSGL TH_4616|M.thermoresistible__bu GGQLSEAYIVGMTHIMEGVEQMRGTAINQVPNAELALVTGGPASLPVSGL ****.**** **. * ***.*:***::* * ..* .*:*.* :.:*.*** MAB_0618|M.abscessus_ATCC_1997 ILG--- MSMEG_5990|M.smegmatis_MC2_155 ILG--- Mflv_1513|M.gilvum_PYR-GCK ILG--- Mvan_5253|M.vanbaalenii_PYR-1 ILG--- Mb3570c|M.bovis_AF2122/97 ILG--- Rv3540c|M.tuberculosis_H37Rv ILG--- MMAR_5027|M.marinum_M ILG--- MUL_4101|M.ulcerans_Agy99 ILG--- MAV_1918|M.avium_104 ILGKAA TH_4616|M.thermoresistible__bu ILGKAA ***