For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSVSRLQQLCGIGVNDVGDRADALNDPEMLRLENLDTDLAPPAVAVEVTKRAVTDDAANSYLPFEGHYEL RRAAATHVSRISGISYDPFRECVSVAGGTNGVLNALLATVEPGKEVVIADPTYAGLINRIRLAGAIPRHI AAHPSPTGWRTDPAELAAAIGPNTAAVLLMGPEMPTGALLSSEHLDAITEPVTQHRAWVIYDAAMERIRF DDQPPLHPASHPGLAERTITIGSASKELRMIGWRVGWIVGPRAIMADIALVGLTNVVCQGGIVKTCGLGC FRRPPFRLIRPVRVV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_1464 | - | - | 100% (295) | aminotransferase, classes I and II family protein |
M. avium 104 | MAV_0979 | - | 9e-32 | 35.48% (217) | aminotransferase |
M. avium 104 | MAV_4818 | - | 2e-15 | 28.28% (198) | aminotransferase AlaT |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0881c | - | 1e-31 | 37.50% (200) | aminotransferase |
M. gilvum PYR-GCK | Mflv_1680 | - | 9e-33 | 34.86% (218) | aminotransferase |
M. tuberculosis H37Rv | Rv0858c | - | 1e-31 | 37.50% (200) | aminotransferase |
M. leprae Br4923 | MLBr_02502 | - | 2e-16 | 28.79% (198) | aminotransferase AlaT |
M. abscessus ATCC 19977 | MAB_0847c | - | 3e-32 | 34.56% (217) | aminotransferase |
M. marinum M | MMAR_4678 | - | 3e-28 | 34.39% (221) | aminotransferase |
M. smegmatis MC2 155 | MSMEG_5725 | - | 3e-34 | 35.48% (217) | aminotransferase |
M. thermoresistible (build 8) | TH_2032 | - | 5e-29 | 34.82% (224) | PLP-dependent aminotransferases |
M. ulcerans Agy99 | MUL_0297 | - | 3e-27 | 33.94% (221) | aminotransferase |
M. vanbaalenii PYR-1 | Mvan_5070 | - | 9e-29 | 33.94% (218) | aminotransferase |
CLUSTAL 2.0.9 multiple sequence alignment Mb0881c|M.bovis_AF2122/97 ------------------------------------MTVSRLRPYATTVF Rv0858c|M.tuberculosis_H37Rv ------------------------------------MTVSRLRPYATTVF MMAR_4678|M.marinum_M ------------------------------------MTVSRLQPYATTVF MUL_0297|M.ulcerans_Agy99 ------------------------------------MTVSRLQPYATTVF TH_2032|M.thermoresistible__bu ------------------------------------MTVERLRPYATTIF Mflv_1680|M.gilvum_PYR-GCK ------------------------------------MTVQRLRPYAVTIF Mvan_5070|M.vanbaalenii_PYR-1 ------------------------------------MTVRRLQPYAVTIF MSMEG_5725|M.smegmatis_MC2_155 ------------------------------------MTVRRLQPFAVTIF MAB_0847c|M.abscessus_ATCC_199 ---------------------------------MNQRTVERLRPFGATIF MAV_1464|M.avium_104 ------------------------------------MSVSRLQQLCGIGV MLBr_02502|M.leprae_Br4923 MTLYQQISVDGSGTMSDVTTHQLPMHTPGYHRQRAFAQSSKLQDVLYEIR :*: Mb0881c|M.bovis_AF2122/97 AEMSALATRIG-------AVNLG-QGFPDEDGPPKMLQAAQDAIAGGVN- Rv0858c|M.tuberculosis_H37Rv AEMSALATRIG-------AVNLG-QGFPDEDGPPKMLQAAQDAIAGGVN- MMAR_4678|M.marinum_M AEMSALAARIG-------AVNLG-QGFPDEDGPPAMLKAAQEAIAAGAN- MUL_0297|M.ulcerans_Agy99 AEMSALAARIG-------AVNLG-QGFPDEDGPPAMLKAAQEAIAAGAN- TH_2032|M.thermoresistible__bu AEMSALAARVG-------AVNLG-QGFPDEDGPPAMLEIARDAIAEGMN- Mflv_1680|M.gilvum_PYR-GCK AETSALAARVG-------AVNLG-QGFPDEDGPPAMLKAAENAIAEGVN- Mvan_5070|M.vanbaalenii_PYR-1 AEMSALAARVG-------AVNLG-QGFPDEDGPPAMLKAAENAIAEGVN- MSMEG_5725|M.smegmatis_MC2_155 AEMSALATRLG-------AVNLG-QGFPDEDGPVEMLKVAQNAIADGIN- MAB_0847c|M.abscessus_ATCC_199 AEMSALAVRHD-------AINLG-QGFPDEDGPASMLDAAQQAIRSGLN- MAV_1464|M.avium_104 NDVGDRADALNDP----EMLRLE-NLDTDLAPPAVAVEVTKRAVTDDAAN MLBr_02502|M.leprae_Br4923 GPVSQHATRLETEGHRILKLNIGNPALFGFDAPDVIMRDMIQALPYAQG- . * :.: . * : *: Mb0881c|M.bovis_AF2122/97 QYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGL Rv0858c|M.tuberculosis_H37Rv QYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGL MMAR_4678|M.marinum_M QYPPGMGIPALRQAIAAQRRRRFGVEYDPDTEVLVTVGATEAIAAAVLGL MUL_0297|M.ulcerans_Agy99 QYPPGMGIPALRQAIAAQRRRRFGVEYDPDTEVLVTVGATEAIAAAVRGL TH_2032|M.thermoresistible__bu QYPPGIGIAPLRQAIAAQRERHYGVEYDPDTEVLVTVGATEAIAGAVLGL Mflv_1680|M.gilvum_PYR-GCK QYPPGLGFAPLRQAIADQRRRRYGTVYDPDTEVLVTVGATEAIASSVLGL Mvan_5070|M.vanbaalenii_PYR-1 QYPPGLGIAPLRQAIADQRRRRYGSEYDPDTEVLVTVGATEAIAAAILGL MSMEG_5725|M.smegmatis_MC2_155 QYPPGLGVPELRQAIAAQRKRVHGVQYDPDTEVLVTVGATEAIAASVIGL MAB_0847c|M.abscessus_ATCC_199 QYPPGLGIPELRRAITADRLARYGEELDPDTQVLVTVGATEAIAGALLGL MAV_1464|M.avium_104 SYLPFEGHYELRRAAATHVSRISGISYDPFRECVSVAGGTNGVLNALLAT MLBr_02502|M.leprae_Br4923 -YSDSQGILPARRAVVTRYELVDGFPRFDVDDVYLGNGVSELITMTLQAL * * *:* . * : * :: : :: . Mb0881c|M.bovis_AF2122/97 VEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRA Rv0858c|M.tuberculosis_H37Rv VEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRA MMAR_4678|M.marinum_M VEPGSEVLLIEPFYDSYAPVIAMAGAKRVAVPLVPDGRGFALDADALRRA MUL_0297|M.ulcerans_Agy99 VEPGSEVLLIEPFYDSYAPVIAMAGAKRVAVPLVPDGRGFALDADALRRA TH_2032|M.thermoresistible__bu VEPGSEVLLIEPFYDSYSPVIAMAGAHRVAVPLVTDGPGFAVDLDALRRA Mflv_1680|M.gilvum_PYR-GCK VEPGSEVLLIEPFYDSYSPVIAMAGCHRRAVPLRQNGRGFAIDIEALRAA Mvan_5070|M.vanbaalenii_PYR-1 VEPDSEVLLIEPFYDSYSPVIAMAGCHRRAVPMVRDGRGFAIDVEGLRRA MSMEG_5725|M.smegmatis_MC2_155 VEPGSEVLVIEPFYDSYSPVIAMAGCERRAVPLVPSGRGFAIDVDALRAA MAB_0847c|M.abscessus_ATCC_199 VEPGSEVILIEPYYDSYAAVVAMAGAVRVPVPLVPDGAGFALDTDALAAA MAV_1464|M.avium_104 VEPGKEVVIADPTYAGLINRIRLAGAIPRHIAAHPSPTGWRTDPAELAAA MLBr_02502|M.leprae_Br4923 LDNGDQVLIPSPDYPLWTASTSLAGGTPVHY-LCDETQGWQPDIADVESK :: ..:*:: .* * :** . *: * : Mb0881c|M.bovis_AF2122/97 VTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLV Rv0858c|M.tuberculosis_H37Rv VTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLV MMAR_4678|M.marinum_M VTPKTRALIVNSPHNPTGAVLRRAELAAIAEIAVAADLLVITDEVYEHLV MUL_0297|M.ulcerans_Agy99 VTPKTRALIVNSPHNPTGAVLSRAELAAIAEIAVAADLLVITDEVYEHLV TH_2032|M.thermoresistible__bu VTPRTRAMIVNSPHNPTGMVLTEAELAGIAELAVSADLLVITDEVYEHLV Mflv_1680|M.gilvum_PYR-GCK VGPRTRALIVNTPHNPTGMIASDEELRGLAELAVAHDLLVITDEVYEHLV Mvan_5070|M.vanbaalenii_PYR-1 VTPKTRALILNSPHNPTGSVASDDELRAVAELAISADLLVITDEVYEHLV MSMEG_5725|M.smegmatis_MC2_155 VTPQTKALILNSPHNPTGAVASDAELRAVAALAVEHDLLVITDEVYEALV MAB_0847c|M.abscessus_ATCC_199 ITPRTAALVINSPHNPTGKVFTDTELARIAELAVEHDLLVVSDEVYERLL MAV_1464|M.avium_104 IGPNTAAVLLMGPEMPTGALLSSEHLDAITEPVTQHRAWVIYDAAMERIR MLBr_02502|M.leprae_Br4923 ITERTKALVVINPNNPTGAVYSNEILNQIVDLARKHQLLLLADEIYDKIL : .* *::: *. *** : * :. . :: * : : Mb0881c|M.bovis_AF2122/97 FDHAR---HLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP----- Rv0858c|M.tuberculosis_H37Rv FDHAR---HLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGP----- MMAR_4678|M.marinum_M FTSPTGHQHLPLAGFDGMAQRTVTISSAAKMFNCTGWKIGWACGP----- MUL_0297|M.ulcerans_Agy99 FTSPTGHQHLPLAGFDGMAQRTVTISSAAKMFNCTGWKIGWACGL----- TH_2032|M.thermoresistible__bu YPSPAGRRHIPLASYPGMAERTVTISSAAKMFNCTGWKIGWACGP----- Mflv_1680|M.gilvum_PYR-GCK FDGRQ---HRPLAGYPGMAERTVTISSAGKMFNVTGWKIGWACGP----- Mvan_5070|M.vanbaalenii_PYR-1 FDGRR---HRPLADYPGMAGRTITISSAGKMFNVTGWKIGWACGP----- MSMEG_5725|M.smegmatis_MC2_155 FDGHR---HLTLASYPGMRDRTVTISSAAKMFNATGWKIGWACGA----- MAB_0847c|M.abscessus_ATCC_199 FDGRT---QTPMASLPGMADRTVTISSAAKTFNCTGWKIGWACGT----- MAV_1464|M.avium_104 FDDQP---PLHPASHPGLAERTITIGSASKELRMIGWRVGWIVGP----- MLBr_02502|M.leprae_Br4923 YDDTK---HISVASIA-PDLLCLTFNGLSKAYRVAGYRSGWLAITGPKDH : *. :*:.. .* . *:: ** Mb0881c|M.bovis_AF2122/97 -AELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRD Rv0858c|M.tuberculosis_H37Rv -AELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRD MMAR_4678|M.marinum_M -QELIAGVRAAKQYMSYVGGAPLQPAVALALDSEDAWVAALRTSLQARRD MUL_0297|M.ulcerans_Agy99 -KELIAGVRAAKQYMSYVGGAPLQPAVALALDSEDAWVVALRTSLQARRD TH_2032|M.thermoresistible__bu -SDLIAGVRAAKQYLSYVGGAPFQPAVAHALDHEDAWVAALRDSLQSRRD Mflv_1680|M.gilvum_PYR-GCK -SDLIAGVRAAKQYLSYVAGAPFQPAVAQALNNEDAWVDALCASFQARRD Mvan_5070|M.vanbaalenii_PYR-1 -SDLIAGVRAAKQYLSYVGGAPFQPAVAHALATEDAWVDALCASFQSRRD MSMEG_5725|M.smegmatis_MC2_155 -PELIAGVRAAKQYLTYVGGAPFQPAVAHALNHEDGWVADLRDSFQSKRD MAB_0847c|M.abscessus_ATCC_199 -PELVAGVRAAKQFLSYVGGGPFQPAVAVALDTEQSWVKTLRESLQRRRD MAV_1464|M.avium_104 -RAIMADIALVGLTNVVCQGG----------------------------- MLBr_02502|M.leprae_Br4923 ASSFIGGINLLAN-MRLCPNVPAQHAIQVALGGHQSIEDLVLPGGRLLEQ ::..: . Mb0881c|M.bovis_AF2122/97 R-----LAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKV Rv0858c|M.tuberculosis_H37Rv R-----LAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKV MMAR_4678|M.marinum_M R-----LAAGLSEIGFGVHDSHGTYFLCADPRPLGYDDSTAFCAALPEKV MUL_0297|M.ulcerans_Agy99 R-----LAAGLSEIGFGVHDSHGTYFLCADPRPLGYDDSTAFCAALPERV TH_2032|M.thermoresistible__bu T-----LAAALTEIGFEVHDSAGTYFLCADPRPLGYPDSTEFCAGLPERV Mflv_1680|M.gilvum_PYR-GCK R-----LSSALSDIGFDVFDSFGTYFLTVDPRPLGYDDSTSFCAQLPEQV Mvan_5070|M.vanbaalenii_PYR-1 R-----LGSALSDIGFEVHESFGTYFLCVDPRPLGFTDSAAFCAELPERV MSMEG_5725|M.smegmatis_MC2_155 R-----LGSALAEIGFEVHDSRGTYFLCADPRPLGYDDSTAFCAELPTRA MAB_0847c|M.abscessus_ATCC_199 R-----LSAALTGLGFEVHSSDGGYFVCADPRPLGFSDSAELCRRLPETV MAV_1464|M.avium_104 ---------------------------IVKTCGLGCFRRPPFRLIRPVRV MLBr_02502|M.leprae_Br4923 RDVAWTKLNEIPGVSCVKPTGALYAFPRLDPEVYGIVDDEQLVLDLLLQE .. * : Mb0881c|M.bovis_AF2122/97 GVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVL Rv0858c|M.tuberculosis_H37Rv GVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVL MMAR_4678|M.marinum_M GVAAIPMSAFCDPVAEHASTQADIWNHLVRFTFCKREDTLDEAIKRLAAL MUL_0297|M.ulcerans_Agy99 GVAAIPMSAFCDPVAEHAPTQADIWNHLVRFTFCKREDTLDEAIKRLAAL TH_2032|M.thermoresistible__bu GVAAIPMSAFCDPAAPHA----EVWNHLVRFTFCKRPETLEEGIRRLGAL Mflv_1680|M.gilvum_PYR-GCK GVAAIPMSAFCDPDAAHA----GEWKHLVRFAFCKRDETLDEAIRRLQAL Mvan_5070|M.vanbaalenii_PYR-1 GVAAIPMSAFCDPAAGHA----EEWKHLVRFAFCKREDTLDEAIRRLRAL MSMEG_5725|M.smegmatis_MC2_155 GVAAIPMSAFCDPDAPHA----DVWNHLVRFAFCKRDDTLDEAIRRLQAL MAB_0847c|M.abscessus_ATCC_199 GVAAVPVSAFCD---RYA----DQWNHLVRFTFAKRDVVIDEAITRLARL MAV_1464|M.avium_104 V------------------------------------------------- MLBr_02502|M.leprae_Br4923 KILVTQGSGFNWPAPDHLR--------LVTLPWSRDLAAAIDRLGNFLVS Mb0881c|M.bovis_AF2122/97 AERPAT Rv0858c|M.tuberculosis_H37Rv AERPAT MMAR_4678|M.marinum_M RDAA-- MUL_0297|M.ulcerans_Agy99 RDAA-- TH_2032|M.thermoresistible__bu RRG--- Mflv_1680|M.gilvum_PYR-GCK RSTG-- Mvan_5070|M.vanbaalenii_PYR-1 PRSR-- MSMEG_5725|M.smegmatis_MC2_155 RRC--- MAB_0847c|M.abscessus_ATCC_199 GA---- MAV_1464|M.avium_104 ------ MLBr_02502|M.leprae_Br4923 YRQ---