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M. avium 104 MAV_0673 (-)

annotation: cell envelope-related function transcriptional attenuator
coordinates: 654216 - 655781
length: 521

MARSGGAHRRHRAVRQPSRFRKGLTRTLGALVSVAAIGLTGAGYYVAHGALGGITVSNALQPDDPRSSGD
NMNILLIGLDSRKDQDGNDLPYSILKHLHAGDSDDGGYNTNTLILVHVSADNKVVAFSIPRDDWVPFSGV
PGYNHIKIKEAYGLTKQYVAQKLANQGTSSQKELETKGREAGRAATLRAVRNLTGVPIDYFAEVNLAGFY
DLAQTLGGVEVCLNHPVYDSYSGADFPAGRQRLDASEALSFVRQRHGLDNGDLDRTHRQQAFISSVMQEL
QAAGTFTNIDKLKNLMAVARKDVVLSAGWTDDMIQRLGGLAGGNIEFRTLPVVRYDNIDGQDVNIVDPAA
IKAEVAAAIGADAPTSAPTSTSVAPDPSTVVDVVNSGSMSGLASEVSHALKKRGYTTGQVRDRESGDPAA
TTIEYGAGAQNDARNLANLLSLDAPNQPSPSIAPGHIRLTVDTNFTMPTTDDTQLDDTTSTSSTTTSSKA
KTYYYNGTTTTYPTPDQGKPIDGGGVPCVN*

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. avium 104 MAV_0673 - - 100% (521) cell envelope-related function transcriptional attenuator
M. avium 104 MAV_5148 - 8e-83 39.61% (515) cell envelope-related function transcriptional attenuator
M. avium 104 MAV_4232 - 8e-65 35.90% (429) cell envelope-related function transcriptional attenuator

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb3514 cpsA 0.0 76.39% (521) hypothetical protein Mb3514
M. gilvum PYR-GCK Mflv_4737 - 7e-62 33.89% (478) cell envelope-related transcriptional attenuator
M. tuberculosis H37Rv Rv3484 cpsA 0.0 76.39% (521) hypothetical protein Rv3484
M. leprae Br4923 MLBr_02247 cpsA 0.0 72.00% (525) hypothetical protein MLBr_02247
M. abscessus ATCC 19977 MAB_0560 - 1e-160 56.44% (528) hypothetical protein MAB_0560
M. marinum M MMAR_4966 cpsA 0.0 75.82% (517) membrane protein CpsA
M. smegmatis MC2 155 MSMEG_0107 - 1e-87 38.61% (531) cell envelope-related function transcriptional attenuator
M. thermoresistible (build 8) TH_3471 - 2e-67 34.99% (503) PUTATIVE cell envelope-related transcriptional attenuator
M. ulcerans Agy99 MUL_4040 cpsA 0.0 75.90% (498) membrane protein CpsA
M. vanbaalenii PYR-1 Mvan_1726 - 2e-65 33.99% (506) cell envelope-related transcriptional attenuator

CLUSTAL 2.0.9 multiple sequence alignment


Mb3514|M.bovis_AF2122/97            -MARSEGNRPRHRAVPQPSR----IRKRLSRGVMTLVSVVALLMTGAGYW
Rv3484|M.tuberculosis_H37Rv         -MARSEGNRPRHRAVPQPSR----IRKRLSRGVMTLVSVVALLMTGAGYW
MMAR_4966|M.marinum_M               -MGRT---KARHRAVRKPSP----IRRRVSRTLMTLVSVVALGMTGAGYW
MUL_4040|M.ulcerans_Agy99           ----------------------------MSRILMTLVSVVALGMTGAGYW
MAV_0673|M.avium_104                MMARSGGAHRRHRAVRQPSR----FRKGLTRTLGALVSVAAIGLTGAGYY
MLBr_02247|M.leprae_Br4923          -MARSHNPRHRHRAIHKPSR----IRIALTRSFMTLTSFVAVLLTGAGYW
MAB_0560|M.abscessus_ATCC_1997      -MSRDTGRRRPKHALPKSNKRWSVSKTAAARTIFALLACGSLVVTGAGWQ
MSMEG_0107|M.smegmatis_MC2_155      --MNSPAHALTKPRRRTPRR----AVRLARRALVGLTAAAILAGTGMGWV
Mflv_4737|M.gilvum_PYR-GCK          -----------------------MPAAHMLRAVSVALAVAIVIGTGVAWG
Mvan_1726|M.vanbaalenii_PYR-1       -----------------------MPAAHLVRAISVAMAVVVVLGTGIAWG
TH_3471|M.thermoresistible__bu      ------------------------VPARLIRALAVATAVVIVLSTGVAWS
                                                                  * .    :   :  ** .: 

Mb3514|M.bovis_AF2122/97            VAHGALGGITISQALTPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVL
Rv3484|M.tuberculosis_H37Rv         VAHGALGGITISQALTPEDPRSSGNNMNILLIGLDSRKDQEGNDLPWSVL
MMAR_4966|M.marinum_M               VAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSRKDQEGNDLPWSIL
MUL_4040|M.ulcerans_Agy99           VAHGALTGITISQALTAEDPRSTGNNMNILLIGLDSRKDQEGNDLPWSIL
MAV_0673|M.avium_104                VAHGALGGITVSNALQPDDPRSSGDNMNILLIGLDSRKDQDGNDLPYSIL
MLBr_02247|M.leprae_Br4923          VAHRALEDITVSQALTTDDPRSTDNNINILLIGLDSRKDQQGNDLPWSIL
MAB_0560|M.abscessus_ATCC_1997      VFYKAFSHVPTSGAEAEGG-KSSDGSMNMLLIGLDSRKDQDGNDLPRAVL
MSMEG_0107|M.smegmatis_MC2_155      TYHGALDGITTSNALAGES-GSVGDTENILIMGLDSRLDQHGNPLPEDVY
Mflv_4737|M.gilvum_PYR-GCK          KIRSFEAGINHINPIALGGEGEDG-AIDILLVGSDSRTDAHGNPLSDQER
Mvan_1726|M.vanbaalenii_PYR-1       KIRSFESGINHINPVALGEGGEDG-AIDILLVGSDSRTDAHGNPLSDEER
TH_3471|M.thermoresistible__bu      RIRAFEAGISQISSPLLGQGGEDG-AVDILLVGMDSRTDAHGNPLSAEEL
                                            :    .       . .   ::*::* *** * .** *.    

Mb3514|M.bovis_AF2122/97            KQLHAGDSDDGGYNTNTLILVHVGADG-KVVAFSIPRDDWVPFTGVP-GY
Rv3484|M.tuberculosis_H37Rv         KQLHAGDSDDGGYNTNTLILVHVGADG-KVVAFSIPRDDWVPFTGVP-GY
MMAR_4966|M.marinum_M               KHLHAGDSDQGGYNTNTLILVHVSADG-KVVAFSIPRDDWVPFTGVP-GY
MUL_4040|M.ulcerans_Agy99           KHLHAGDSDQGGYNTNTLILVHVSADG-KVVAFSIPRDDWVPFTGVP-GY
MAV_0673|M.avium_104                KHLHAGDSDDGGYNTNTLILVHVSADN-KVVAFSIPRDDWVPFSGVP-GY
MLBr_02247|M.leprae_Br4923          KQLHAGDSNDGGYNTNTLILVHVGADN-KAVAFSIPRDDWVPFSDVP-GY
MAB_0560|M.abscessus_ATCC_1997      NQLHAGDSDAGGYNTNTLILVHVGADN-KVTAFSIPRDDWVPAEGIP-GY
MSMEG_0107|M.smegmatis_MC2_155      QALHAGDETVGGYNANVLIVVHLPGDGGPATAFSIPRDDYVDLAGCPSGI
Mflv_4737|M.gilvum_PYR-GCK          AMLRAG--DEVSTNTDTIILIRIPNNGESATAISIPRDSYVEAPGIG---
Mvan_1726|M.vanbaalenii_PYR-1       AMLRAG--DEVSTNTDTIILIRIPNNGQSATAISIPRDSYVESPGIG---
TH_3471|M.thermoresistible__bu      AALRAG--NDVATNTDTIVLVRIPNNGRSATAISIPRDSYVEAPGRG---
                                      *:**     . *::.::::::  :.  ..*:*****.:*   .     

Mb3514|M.bovis_AF2122/97            NHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATLRAVRSL
Rv3484|M.tuberculosis_H37Rv         NHIKIKEAYGLTKQYVAEQLANQGVSDRKELETRGREAARAATLRAVRSL
MMAR_4966|M.marinum_M               NHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREAGRAATLRAVRAL
MUL_4040|M.ulcerans_Agy99           NHIKIKEAYGLTKQYVAQELIDQGVTSQRELETRGREAGRAATLRAVRAL
MAV_0673|M.avium_104                NHIKIKEAYGLTKQYVAQKLANQGTSSQKELETKGREAGRAATLRAVRNL
MLBr_02247|M.leprae_Br4923          NHIKIKEAYGLTKQYVTQKLIDQGVTDQKELETQGREAGRAATLRIVRSL
MAB_0560|M.abscessus_ATCC_1997      KHIKIKEAYGLTKANEADKLVNEGITDQATLEQQSREAGRRATLNAVHRL
MSMEG_0107|M.smegmatis_MC2_155      CKGKVKQAYGFAYQAEMEATESE-EEDPATREQKAREAGRKAEIATVRNL
Mflv_4737|M.gilvum_PYR-GCK          -KMKINGVYGSVHLEEMKELVEQQGVDPAEAEPEAQAAGREELIKTVANL
Mvan_1726|M.vanbaalenii_PYR-1       -KLKINGVYGSVHLEKMKELVEEQGVDPAVAEPEAQAAGREQLIKTVANL
TH_3471|M.thermoresistible__bu      -KMKINGVYGEVKFETMKQLVEVQGMDPEVAEPLAVQDARGALIETVAEL
                                     : *:: .** .     .   .    .    *  .   .*   :  *  *

Mb3514|M.bovis_AF2122/97            TGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRL
Rv3484|M.tuberculosis_H37Rv         TGVPIDYFAEINLAGFYDLAQTLGGVDVCLNHAVYDSYSGADFPAGRQRL
MMAR_4966|M.marinum_M               TGVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRL
MUL_4040|M.ulcerans_Agy99           TGVPIDYFAEVNLAGFYDLAQALGGVEVCLNHAVDDSYSGADFPAGRQRL
MAV_0673|M.avium_104                TGVPIDYFAEVNLAGFYDLAQTLGGVEVCLNHPVYDSYSGADFPAGRQRL
MLBr_02247|M.leprae_Br4923          TGVSIDYFAEVNLAGFYDLTHTLGGVEVCLNHAVYDSYSGADFPAGRQRL
MAB_0560|M.abscessus_ATCC_1997      TGQPIDYFAEVNLVGFYDLASELGGITVCLNNAVYDSYSGANFPAGEQTL
MSMEG_0107|M.smegmatis_MC2_155      LGIPIDHFVEVTLGAFFEIAKAVAPITVCLNDDTSDPYSGADFRKGVQQI
Mflv_4737|M.gilvum_PYR-GCK          TGVTVDHYAEIGLLGFALITDALGGVDVCLNAPVYEPLSGADFPAGWQKL
Mvan_1726|M.vanbaalenii_PYR-1       TGVTVDHYAEIGLLGFALITDALGGVNVCLNAPVYEPLSGADFPAGWQKL
TH_3471|M.thermoresistible__bu      TGVTVDHYAEIGLLGFALITDALGGVEVCLKNPVYEPLSGADFPAGWQRL
                                     * .:*::.*: * .*  ::  :. : ***:  . :. ***:*  * * :

Mb3514|M.bovis_AF2122/97            NAAQALAFVRQRHGLDNG---DLDRTHRQQAFLSSVMRELQDSGTFTNLD
Rv3484|M.tuberculosis_H37Rv         NAAQALAFVRQRHGLDNG---DLDRTHRQQAFLSSVMRELQDSGTFTNLD
MMAR_4966|M.marinum_M               DAAQALAFVRQRHGLDNG---DLDRTHRQQAFLSSVMRDLQDSGTFTNLD
MUL_4040|M.ulcerans_Agy99           DAAQALAFVRQRHGLDNG---DLDRTHRQQVFLSSVMRDLQDSGTFTNLD
MAV_0673|M.avium_104                DASEALSFVRQRHGLDNG---DLDRTHRQQAFISSVMQELQAAGTFTNID
MLBr_02247|M.leprae_Br4923          DASEALAFVRQRHGLDNG---DLDRTHRQQAFISSVMRELGDTGTFTNLD
MAB_0560|M.abscessus_ATCC_1997      NASQALAFVRQRHGLENG---DLDRTHRQQAFLISVMQQLRNAGTLTDIT
MSMEG_0107|M.smegmatis_MC2_155      DAAQAMAFVRQRRDINDENFTDLDRTRRQQAFLAALVSALRQSGALSSPS
Mflv_4737|M.gilvum_PYR-GCK          NGTQALSFVRQRHDLPRG---DLDRVARQQAAMASMAHEVISSKTLSSPS
Mvan_1726|M.vanbaalenii_PYR-1       NGTQALSFVRQRHDLPRG---DLDRVARQQAVMASMAHEVISSKTLSSPT
TH_3471|M.thermoresistible__bu      DGAQALSFVRQRQDLPRG---DLDRVTRQQTVMASLAREVISSKTLSSPA
                                    :.::*::*****:.:      ****. ***. : ::   :  : :::.  

Mb3514|M.bovis_AF2122/97            RLDNLMAVARKDVVLSAGWD-EDLFRRMGDLAG----GNVEFRTLPVVRY
Rv3484|M.tuberculosis_H37Rv         RLDNLMAVARKDVVLSAGWD-EDLFRRMGDLAG----GNVEFRTLPVVRY
MMAR_4966|M.marinum_M               RLDSLMAVARKDLVLSGGWD-EDLIRRMGELAG----ADIEFRTLPVVRY
MUL_4040|M.ulcerans_Agy99           RLDSLMAVARKDLVLSGGWD-EDLVRRMGELAG----ADIEFRTLPVVRY
MAV_0673|M.avium_104                KLKNLMAVARKDVVLSAGWT-DDMIQRLGGLAG----GNIEFRTLPVVRY
MLBr_02247|M.leprae_Br4923          KLRSLMAVARKDVVLSAGWN-EDLIQRLGTLANDVGENRTQFRTLPVVRY
MAB_0560|M.abscessus_ATCC_1997      KLNGLMNVVHKDVVLSKGWT-EKQFQRLGQIAD----GNVNFQTLPVVRY
MSMEG_0107|M.smegmatis_MC2_155      KLRGLLDVTKQNVALDAGFDLASFTKRASALTD----APPTLYTLPIKEF
Mflv_4737|M.gilvum_PYR-GCK          TLSALESAVQRSVVLSEGWDIMDFVEQLQKLAA----GNVAFATIPILEE
Mvan_1726|M.vanbaalenii_PYR-1       TLNNLEDAVQRSVVLSDGWNIMDFVEQLQKLAG----GNIAFATIPIVEE
TH_3471|M.thermoresistible__bu      TLDRLQRAIQRSVVLSDGWDVMEFVEQLQGLAA----GNIAFATIPIVRE
                                     *  *  . ::.:.*. *:   .  .:   ::         : *:*: . 

Mb3514|M.bovis_AF2122/97            ---DNIDGQDVNIIDPTAIRAEVAAAFG-SAPPTSQTAAAAKPNPS---T
Rv3484|M.tuberculosis_H37Rv         ---DNIDGQDVNIIDPTAIRAEVAAAFG-SAPPTSQTAAAAKPNPS---T
MMAR_4966|M.marinum_M               ---DNIDGQDVNIVDPAAIKAEVAAAIGTTSTAATATTTPAKPSPS---T
MUL_4040|M.ulcerans_Agy99           ---DNIDGQDVNIVDPAAIKAEVAAAIGSTSTAATATTTPAKPSPS---T
MAV_0673|M.avium_104                ---DNIDGQDVNIVDPAAIKAEVAAAIGADAPTSAPTSTSVAPDPS---T
MLBr_02247|M.leprae_Br4923          ---DNINGQAVNIIDPVAIKAEVASTIG---TASPATATPSKPNPS---T
MAB_0560|M.abscessus_ATCC_1997      ---DNINGADVNIVDPVAIRAKVAAAFK----GEDAAPASAATTPT---S
MSMEG_0107|M.smegmatis_MC2_155      G--QNAYGEDINIIDVPTIRKIVHDLVS-KDDPATTTATPDKPELNGHGA
Mflv_4737|M.gilvum_PYR-GCK          AGWSDDGMQSVVRVDPKEVKDWVTSLLNDQDQGKTEELAYSNDKTT----
Mvan_1726|M.vanbaalenii_PYR-1       AGWSDDGMQSVVRVDPAAVKDWVTGLLHDQDEGKTEELTYSNDKTT----
TH_3471|M.thermoresistible__bu      DGWSDDGMQSVVRVDPQQVRDWVSSLLEEQDEGKTEEIAYSRDKTT----
                                       .:     :  :*   ::  *   .           :      .    

Mb3514|M.bovis_AF2122/97            VVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGAGA
Rv3484|M.tuberculosis_H37Rv         VVDVVNAGSISGLASQVSGALLKRGYTAGQVRDRESGDPFTTAIEYGAGA
MMAR_4966|M.marinum_M               VVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGPGA
MUL_4040|M.ulcerans_Agy99           VVDVVNAGSISGLASQVSNALRKRGYTTDQVRDRKSGDPAATTIKYGPGA
MAV_0673|M.avium_104                VVDVVNSGSMSGLASEVSHALKKRGYTTGQVRDRESGDPAATTIEYGAGA
MLBr_02247|M.leprae_Br4923          VVDVINAGRLTGLASEVFQTLKKHGYTAGQVRDRSSGEPTTTSIQYGAGA
MAB_0560|M.abscessus_ATCC_1997      TVDVVNATSTSGLASTVSSALVSRGYTKGDVRDPLSGESTGTAIDYGVGA
MSMEG_0107|M.smegmatis_MC2_155      TLDVINGSTYTGLAAKLQTTFAADNFTEGQIGDAEALEP-ATTIDYGPGA
Mflv_4737|M.gilvum_PYR-GCK          -VEVYNDSDVNGLAAAVAHVLTGKGFTQGNVGNNEGPKVTGSQVRAAKVD
Mvan_1726|M.vanbaalenii_PYR-1       -VEVVNDTDINGLAAAVSHVLSGKGFTKGNVGNNDGAKVTASQVQAAKTD
TH_3471|M.thermoresistible__bu      -VEVLNGTDINGLAAAVSHVLTSNGFSPGPVGNAEDGPADRTEVRVAKQD
                                     ::* *    .***: :  .:   .:: . : :        : :  .   

Mb3514|M.bovis_AF2122/97            ETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFS--------LPAPD
Rv3484|M.tuberculosis_H37Rv         ETDAQNVADLLGIDAPNHPDPAVAPGHIRVTVDTNFS--------LPAPD
MMAR_4966|M.marinum_M               QADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFS--------MPAPD
MUL_4040|M.ulcerans_Agy99           QADAMNLGTLLGIDAPKQPDASIEPGHIQVTVDTNFS--------MPAPD
MAV_0673|M.avium_104                QNDARNLANLLSLDAPNQPSPSIAPGHIRLTVDTNFT--------MPTTD
MLBr_02247|M.leprae_Br4923          DTDAQNVATLLSIDAPNQADPKLASGHIRVIVDTNYS--------LPADE
MAB_0560|M.abscessus_ATCC_1997      DADAKAMSTMLGIETEPVADPTLAPGRIRVMLGTGYS--------APSDV
MSMEG_0107|M.smegmatis_MC2_155      DAAAHSLATELGVTAT--PSDWVLADTVRLTIGTDFPGTDYLGADMFTST
Mflv_4737|M.gilvum_PYR-GCK          DMGAQAVALDLG-GLEVVEDSSVPPDTVRVVLADDYTG--------PGAG
Mvan_1726|M.vanbaalenii_PYR-1       DLGAQAVAQELG-GLPVVENAQVPQGSVRVVLAADYTG--------PGAG
TH_3471|M.thermoresistible__bu      DRGAREVADQLG-DLPIVEDRTVAPGFVRVVLADDYTG--------PGSG
                                    :  *  :.  *.       .  :  . ::: :  .:.             

Mb3514|M.bovis_AF2122/97            E-------ATAAATSTETSTYPLYGGG-TTTDPTPDQGAPIDGG--GVPC
Rv3484|M.tuberculosis_H37Rv         E-------ATAAATSTETSTYPLYGGG-TTTDPTPDQGAPIDGG--GVPC
MMAR_4966|M.marinum_M               D-------SDDDTTTYPKPNAYYNGGDDSSSYPAPDHGQPIDGG--GVPC
MUL_4040|M.ulcerans_Agy99           D-------SDDDTTVYPKPNAYYNGGDDSSSYPAPDHGQPIDGG--GVPC
MAV_0673|M.avium_104                DTQLDDTTSTSSTTTSSKAKTYYYNGT-TTTYPTPDQGKPIDGG--GVPC
MLBr_02247|M.leprae_Br4923          DS------TMDETITSQKVGTYPPYSYNTSPYPTPDQGKPIDGG--GIPC
MAB_0560|M.abscessus_ATCC_1997      LS------AEDSGTASSMSSSSSSGAS--GDYAPPDSGKPVVSSNSGVPC
MSMEG_0107|M.smegmatis_MC2_155      TSGASESESYGPSETAELTPITTVAATATGTYTPAPTDLSQMTAS-GIPC
Mflv_4737|M.gilvum_PYR-GCK          LD--------GSDVTLMGADPSTSGVVSDTGAAVPAPSPIITAGSDDPKC
Mvan_1726|M.vanbaalenii_PYR-1       LD--------GSDVTLMGADPSTSGVVTDTGATVPAPPPILTAGSNDPEC
TH_3471|M.thermoresistible__bu      LD--------GTDPTVTTLQQS-SATVGQTVEAAPPPPQIITAGADDPKC
                                                                    . .        .  .  *

Mb3514|M.bovis_AF2122/97            VN
Rv3484|M.tuberculosis_H37Rv         VN
MMAR_4966|M.marinum_M               VN
MUL_4040|M.ulcerans_Agy99           VN
MAV_0673|M.avium_104                VN
MLBr_02247|M.leprae_Br4923          VN
MAB_0560|M.abscessus_ATCC_1997      VN
MSMEG_0107|M.smegmatis_MC2_155      VK
Mflv_4737|M.gilvum_PYR-GCK          VN
Mvan_1726|M.vanbaalenii_PYR-1       VN
TH_3471|M.thermoresistible__bu      VN
                                    *:

species	id	gene	e-value	identity (len)	annotation
M. avium 104	MAV_0673	-	-	100% (521)	cell envelope-related function transcriptional attenuator
M. avium 104	MAV_5148	-	8e-83	39.61% (515)	cell envelope-related function transcriptional attenuator
M. avium 104	MAV_4232	-	8e-65	35.90% (429)	cell envelope-related function transcriptional attenuator