For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SIEARHTEGAAKLSEHRAGAAPSRGAIMLVDTDPQIAAGLSEQAAQIGISTLWCRDGADALLHIGAEPPD VLVLAAHTDIINAAQITAAVRGRWQLPILIGAAPATDLIARKALAAGASAVITRPYDINAISPFVLGSEE QPGSGPAVYIAGPIQVDRRGHETRVRDRDVQLTVRELELLVFLIEQHGRVASSEEISRAVWGRPSDTNTV AVHVRRLREKLGDDPEHGEYIRTIRGAGYRLAPSISS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_4848c | - | - | 100% (248) | putative response regulator |
M. abscessus ATCC 19977 | MAB_4047c | - | 7e-22 | 27.23% (224) | sensory transduction protein RegX3 |
M. abscessus ATCC 19977 | MAB_3250c | - | 4e-20 | 26.61% (218) | transcriptional regulatory protein KdpE |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0501 | regX3 | 3e-20 | 25.11% (223) | two component sensory transduction protein RegX3 |
M. gilvum PYR-GCK | Mflv_0082 | - | 6e-21 | 25.89% (224) | two component transcriptional regulator |
M. tuberculosis H37Rv | Rv0491 | regX3 | 3e-20 | 25.11% (223) | two component sensory transduction protein RegX3 |
M. leprae Br4923 | MLBr_00773 | mtrA | 3e-19 | 27.80% (223) | putative two-component response regulator |
M. marinum M | MMAR_0816 | regX3 | 6e-20 | 25.11% (223) | two-component sensory transduction protein RegX3 |
M. avium 104 | MAV_4660 | - | 3e-20 | 25.11% (223) | DNA-binding response regulator |
M. smegmatis MC2 155 | MSMEG_1874 | mtrA | 5e-21 | 28.25% (223) | DNA-binding response regulator MtrA |
M. thermoresistible (build 8) | TH_4312 | - | 8e-22 | 27.23% (224) | PUTATIVE two component transcriptional regulator, winged helix |
M. ulcerans Agy99 | MUL_4560 | regX3 | 4e-20 | 25.11% (223) | two component sensory transduction protein RegX3 |
M. vanbaalenii PYR-1 | Mvan_0831 | - | 1e-21 | 26.79% (224) | two component transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mb0501|M.bovis_AF2122/97 -----------------------MTS-VLIVEDEESLADPLAFLLRKEGF Rv0491|M.tuberculosis_H37Rv -----------------------MTS-VLIVEDEESLADPLAFLLRKEGF MAV_4660|M.avium_104 -----------------------MTS-VLIVEDEESLADPLAFLLRKEGF MMAR_0816|M.marinum_M -----------------------MTS-VLIVEDEESLADPLAFLLRKEGF MUL_4560|M.ulcerans_Agy99 -----------------------MTS-VLIVEDEESLADPLAFLLRKEGF Mflv_0082|M.gilvum_PYR-GCK -----------------------MTS-VLIVEDEESLADPLAFLLRKEGF Mvan_0831|M.vanbaalenii_PYR-1 -----------------------MTS-VLIVEDEESLADPLAFLLRKEGF TH_4312|M.thermoresistible__bu -----------------------MTS-VLIVEDEESLADPLAFLLRKEGF MLBr_00773|M.leprae_Br4923 --------------------MDIMRQRILVVDDDASLAEMLTIVLRGEGF MSMEG_1874|M.smegmatis_MC2_155 --------------------MDTMRQRILVVDDDPSLAEMLTIVLRGEGF MAB_4848c|M.abscessus_ATCC_199 MSIEARHTEGAAKLSEHRAGAAPSRGAIMLVDTDPQIAAGLSEQAAQIGI :::*: : .:* *: *: Mb0501|M.bovis_AF2122/97 EATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVI Rv0491|M.tuberculosis_H37Rv EATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVI MAV_4660|M.avium_104 EATVVTDGSAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVI MMAR_0816|M.marinum_M EATVVTDGPAALAEFDRSGADIVLLDLMLPGMSGTDVCKQLRARSSVPVI MUL_4560|M.ulcerans_Agy99 EATVVTDGPAALAEFDRSGADIVLLDLMLPGMSGTDVCKQLRARSSVPVI Mflv_0082|M.gilvum_PYR-GCK ETTVVTDGPSALAEFERAGADIVLLDLMLPGMSGTDVCKQLRSRSSVPVI Mvan_0831|M.vanbaalenii_PYR-1 EATVVADGPSALAEFERAGADIVLLDLMLPGMSGTDVCKQLRSRSSVPVI TH_4312|M.thermoresistible__bu ETTIVTDGPSALAEFERSGADIILLDLMLPGMSGTDVCRRLRAKSKVPVI MLBr_00773|M.leprae_Br4923 DTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIV MSMEG_1874|M.smegmatis_MC2_155 DTAVIGDGSQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIV MAB_4848c|M.abscessus_ATCC_199 STLWCRDGADALLHIGAEPPDVLVLAAHTDIINAAQITAAVRGRWQLPIL .: **. ** . .*:::* :.. :: :*. :*:: Mb0501|M.bovis_AF2122/97 MVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSE Rv0491|M.tuberculosis_H37Rv MVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSE MAV_4660|M.avium_104 MVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSE MMAR_0816|M.marinum_M MVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSE MUL_4560|M.ulcerans_Agy99 MVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD-DDSE Mflv_0082|M.gilvum_PYR-GCK MVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGADADDLG Mvan_0831|M.vanbaalenii_PYR-1 MVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGSDADDAG TH_4312|M.thermoresistible__bu MVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGSDLDGAD MLBr_00773|M.leprae_Br4923 MLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRNDD----- MSMEG_1874|M.smegmatis_MC2_155 MLTAKTDTVDVVLGLESGADDYVMKPFKPKELVARVRARLRRNED----- MAB_4848c|M.abscessus_ATCC_199 IGAAPATDLIARKALAAGASAVITRPYDINAISPFVLGSEEQPGS----- : :* : .* **. : :*:. . : . : . .: . Mb0501|M.bovis_AF2122/97 MSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTR Rv0491|M.tuberculosis_H37Rv MSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTR MAV_4660|M.avium_104 ISDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTR MMAR_0816|M.marinum_M VSDGVLESGPVRMDVERHVVSVNGDAITLPLKEFDLLEYLMRNSGRVLTR MUL_4560|M.ulcerans_Agy99 VSDGVLESGPVRMDVERHVVSVNGDAITLPLKEFDLLEYLMRNSGRVLTR Mflv_0082|M.gilvum_PYR-GCK VADGVLEAGPVRMDVERHVVSVNGAPITLPLKEFDLLEYLMRNSGRVLTR Mvan_0831|M.vanbaalenii_PYR-1 IGDGVLEAGPVRMDVERHVVSVNGQSITLPLKEFDLLEYLMRNSGRVLTR TH_4312|M.thermoresistible__bu VDDSVLEAGPVRMDVDRHVVTVRGEPITLPLKEFELLEYLLRNSGRVLTR MLBr_00773|M.leprae_Br4923 EPAEMLSIADVDIDVPAHKVTRNGEHISLTPLEFDLLVALARKPRQVFTR MSMEG_1874|M.smegmatis_MC2_155 EPAEMLSIGDVEIDVPAHKVTRQGEQISLTPLEFDLLVALARKPRQVFTR MAB_4848c|M.abscessus_ATCC_199 -GPAVYIAGPIQVDRRGHETRVRDRDVQLTVRELELLVFLIEQHGRVASS : . : :* * . .. : *. *::** * .: :* : Mb0501|M.bovis_AF2122/97 GQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL Rv0491|M.tuberculosis_H37Rv GQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL MAV_4660|M.avium_104 GQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL MMAR_0816|M.marinum_M GQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL MUL_4560|M.ulcerans_Agy99 GQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL Mflv_0082|M.gilvum_PYR-GCK GQLIDRVWGADYVGDTKTLDVHVKRLRSKIESDPANPVHLVTVRGLGYKL Mvan_0831|M.vanbaalenii_PYR-1 GQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL TH_4312|M.thermoresistible__bu GQLIDRVWGADYVGDTKTLDVHVKRLRSKIEEDPANPVHLVTVRGLGYKL MLBr_00773|M.leprae_Br4923 DVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKA MSMEG_1874|M.smegmatis_MC2_155 DVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPQVVLTVRGVGYKA MAB_4848c|M.abscessus_ATCC_199 EEISRAVWGR--PSDTNTVAVHVRRLREKLGDDPEHGEYIRTIRGAGYRL : *** .**. : ***:*** *: ** : : *:** **: Mb0501|M.bovis_AF2122/97 EG---- Rv0491|M.tuberculosis_H37Rv EG---- MAV_4660|M.avium_104 EG---- MMAR_0816|M.marinum_M EG---- MUL_4560|M.ulcerans_Agy99 EG---- Mflv_0082|M.gilvum_PYR-GCK EG---- Mvan_0831|M.vanbaalenii_PYR-1 EG---- TH_4312|M.thermoresistible__bu EG---- MLBr_00773|M.leprae_Br4923 GPP--- MSMEG_1874|M.smegmatis_MC2_155 GPP--- MAB_4848c|M.abscessus_ATCC_199 APSISS