For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_4047c (-)

annotation: sensory transduction protein RegX3
coordinates: 4092790 - 4093476
length: 228

TSVLIVEDEDSLADPLAFLLRKEGFEATIVNDGPSALAEFERAGADIVLLDLMLPGMSGTDVCKQLRAKS
SVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGSDSEETASGDGVLEAGPVRMDV
DRHTVSVNGEAITLPLKEFDLLEYLIRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPA
NPVHLVTVRGLGYKLEG*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_4047c--100% (228)sensory transduction protein RegX3
M. abscessus ATCC 19977MAB_3591c-2e-5648.65% (222) DNA-binding response regulator MtrA
M. abscessus ATCC 19977MAB_3339-7e-5044.05% (227) putative sensory transduction protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0501regX31e-11691.67% (228) two component sensory transduction protein RegX3
M. gilvum PYR-GCKMflv_0082-1e-11691.23% (228) two component transcriptional regulator
M. tuberculosis H37RvRv0491regX31e-11691.67% (228) two component sensory transduction protein RegX3
M. leprae Br4923MLBr_02439-8e-9788.89% (198) putative two-component system response regulator
M. marinum MMMAR_0816regX31e-11691.67% (228) two-component sensory transduction protein RegX3
M. avium 104MAV_4660-1e-11591.23% (228) DNA-binding response regulator
M. smegmatis MC2 155MSMEG_0937regX31e-11692.00% (225) DNA-binding response regulator RegX3
M. thermoresistible (build 8)TH_4312-1e-11389.91% (228) PUTATIVE two component transcriptional regulator, winged helix
M. ulcerans Agy99MUL_4560regX31e-11691.67% (228) two component sensory transduction protein RegX3
M. vanbaalenii PYR-1Mvan_0831-1e-11892.98% (228) two component transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_0816|M.marinum_M               MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRSGADIVL
MUL_4560|M.ulcerans_Agy99           MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRSGADIVL
MLBr_02439|M.leprae_Br4923          -----------------------------MVTDGPAALAEFDRSGADIVL
Mb0501|M.bovis_AF2122/97            MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVL
Rv0491|M.tuberculosis_H37Rv         MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVL
MAV_4660|M.avium_104                MTSVLIVEDEESLADPLAFLLRKEGFEATVVTDGSAALAEFDRAGADIVL
Mflv_0082|M.gilvum_PYR-GCK          MTSVLIVEDEESLADPLAFLLRKEGFETTVVTDGPSALAEFERAGADIVL
Mvan_0831|M.vanbaalenii_PYR-1       MTSVLIVEDEESLADPLAFLLRKEGFEATVVADGPSALAEFERAGADIVL
MSMEG_0937|M.smegmatis_MC2_155      ---MLIVEDEESLADPLAFLLRKEGFEATVVGDGPSALAEFERSGADIVL
MAB_4047c|M.abscessus_ATCC_199      MTSVLIVEDEDSLADPLAFLLRKEGFEATIVNDGPSALAEFERAGADIVL
TH_4312|M.thermoresistible__bu      MTSVLIVEDEESLADPLAFLLRKEGFETTIVTDGPSALAEFERSGADIIL
                                                                 :* **.:*****:*:****:*

MMAR_0816|M.marinum_M               LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
MUL_4560|M.ulcerans_Agy99           LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
MLBr_02439|M.leprae_Br4923          LDLMLPGMSGTDVYKQLRVRSSVPVIMVTARDSEIDKVVGLELGADDYVT
Mb0501|M.bovis_AF2122/97            LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
Rv0491|M.tuberculosis_H37Rv         LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
MAV_4660|M.avium_104                LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
Mflv_0082|M.gilvum_PYR-GCK          LDLMLPGMSGTDVCKQLRSRSSVPVIMVTARDSEIDKVVGLELGADDYVT
Mvan_0831|M.vanbaalenii_PYR-1       LDLMLPGMSGTDVCKQLRSRSSVPVIMVTARDSEIDKVVGLELGADDYVT
MSMEG_0937|M.smegmatis_MC2_155      LDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVT
MAB_4047c|M.abscessus_ATCC_199      LDLMLPGMSGTDVCKQLRAKSSVPVIMVTARDSEIDKVVGLELGADDYVT
TH_4312|M.thermoresistible__bu      LDLMLPGMSGTDVCRRLRAKSKVPVIMVTARDSEIDKVVGLELGADDYVT
                                    ************* ::** :*.****************************

MMAR_0816|M.marinum_M               KPYSARELIARIRAVLRRGGD-DDSEVSDGVLESGPVRMDVERHVVSVNG
MUL_4560|M.ulcerans_Agy99           KPYSARELIARIRAVLRRGGD-DDSEVSDGVLESGPVRMDVERHVVSVNG
MLBr_02439|M.leprae_Br4923          KPYSARELIARIRAVLRRGGD-DDSEISDGVLESGPLRMDVERHVVSVNG
Mb0501|M.bovis_AF2122/97            KPYSARELIARIRAVLRRGGD-DDSEMSDGVLESGPVRMDVERHVVSVNG
Rv0491|M.tuberculosis_H37Rv         KPYSARELIARIRAVLRRGGD-DDSEMSDGVLESGPVRMDVERHVVSVNG
MAV_4660|M.avium_104                KPYSARELIARIRAVLRRGGD-DDSEISDGVLESGPVRMDVERHVVSVNG
Mflv_0082|M.gilvum_PYR-GCK          KPYSARELIARIRAVLRRGADADDLGVADGVLEAGPVRMDVERHVVSVNG
Mvan_0831|M.vanbaalenii_PYR-1       KPYSARELIARIRAVLRRGSDADDAGIGDGVLEAGPVRMDVERHVVSVNG
MSMEG_0937|M.smegmatis_MC2_155      KPYSARELIARIRAVLRRGADNDDAGADDGVLEAGPVRMDVERHVVSVNG
MAB_4047c|M.abscessus_ATCC_199      KPYSARELIARIRAVLRRGSDSEETASGDGVLEAGPVRMDVDRHTVSVNG
TH_4312|M.thermoresistible__bu      KPYSARELIARIRAVLRRGSDLDGADVDDSVLEAGPVRMDVDRHVVTVRG
                                    *******************.* :     *.***:**:****:**.*:*.*

MMAR_0816|M.marinum_M               DAITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
MUL_4560|M.ulcerans_Agy99           DAITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
MLBr_02439|M.leprae_Br4923          YAITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGVDYVGDTKTLDVHVK
Mb0501|M.bovis_AF2122/97            DTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
Rv0491|M.tuberculosis_H37Rv         DTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
MAV_4660|M.avium_104                DTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
Mflv_0082|M.gilvum_PYR-GCK          APITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
Mvan_0831|M.vanbaalenii_PYR-1       QSITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
MSMEG_0937|M.smegmatis_MC2_155      EPITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
MAB_4047c|M.abscessus_ATCC_199      EAITLPLKEFDLLEYLIRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
TH_4312|M.thermoresistible__bu      EPITLPLKEFELLEYLLRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVK
                                     .********:*****:******************.**************

MMAR_0816|M.marinum_M               RLRSKIEADPANPVHLVTVRGLGYKLEG
MUL_4560|M.ulcerans_Agy99           RLRSKIEADPANPVHLVTVRGLGYKLEG
MLBr_02439|M.leprae_Br4923          RLRSKIEADPANPVHLVTVRGLGYKLES
Mb0501|M.bovis_AF2122/97            RLRSKIEADPANPVHLVTVRGLGYKLEG
Rv0491|M.tuberculosis_H37Rv         RLRSKIEADPANPVHLVTVRGLGYKLEG
MAV_4660|M.avium_104                RLRSKIEADPANPVHLVTVRGLGYKLEG
Mflv_0082|M.gilvum_PYR-GCK          RLRSKIESDPANPVHLVTVRGLGYKLEG
Mvan_0831|M.vanbaalenii_PYR-1       RLRSKIEADPANPVHLVTVRGLGYKLEG
MSMEG_0937|M.smegmatis_MC2_155      RLRSKIEEDPANPVHLVTVRGLGYKLEG
MAB_4047c|M.abscessus_ATCC_199      RLRSKIEADPANPVHLVTVRGLGYKLEG
TH_4312|M.thermoresistible__bu      RLRSKIEEDPANPVHLVTVRGLGYKLEG
                                    ******* *******************.