For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSEHRVYIDKQTPSVYQGLSKTAAELRARAADTGLSRTTLELVNIRVSQLNRCLFCLDLHTRVALEEGES AQRIAVLPVWQEAELFSDVERAALTIAEAVTEVTDHHLTDEQYTAVREHLSDDQVSVLVWSAIMINTFNR ISILSRHPIKRR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_3943 | - | - | 100% (152) | hypothetical protein MAB_3943 |
| M. abscessus ATCC 19977 | MAB_0197 | - | 3e-21 | 32.47% (154) | putative alkylhydroperoxidase AhpD core |
| M. abscessus ATCC 19977 | MAB_3073 | - | 4e-07 | 27.36% (106) | hypothetical protein MAB_3073 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3360 | - | 3e-05 | 25.89% (112) | transposase |
| M. gilvum PYR-GCK | Mflv_1182 | - | 5e-22 | 39.74% (151) | alkylhydroperoxidase |
| M. tuberculosis H37Rv | Rv3327 | - | 3e-05 | 25.89% (112) | transposase |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | MMAR_3686 | - | 6e-07 | 32.05% (78) | hypothetical protein MMAR_3686 |
| M. avium 104 | MAV_2020 | pcaC | 9e-07 | 26.47% (102) | hypothetical protein MAV_2020 |
| M. smegmatis MC2 155 | MSMEG_5319 | - | 2e-27 | 42.07% (145) | alkylhydroperoxidase AhpD core |
| M. thermoresistible (build 8) | TH_1616 | pcaC | 1e-21 | 40.17% (117) | 4-carboxymuconolactone decarboxylase |
| M. ulcerans Agy99 | MUL_3629 | - | 4e-07 | 32.05% (78) | hypothetical protein MUL_3629 |
| M. vanbaalenii PYR-1 | Mvan_2219 | - | 2e-27 | 43.84% (146) | alkylhydroperoxidase |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_5319|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2219|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_3943|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
Mb3360|M.bovis_AF2122/97 MVVVGTDAHKYSHTFVATDEVGRQLGEKTVKATTAGHATAIMWAREQFGL
Rv3327|M.tuberculosis_H37Rv MVVVGTDAHKYSHTFVATDEVGRQLGEKTVKATTAGHATAIMWAREQFGL
MMAR_3686|M.marinum_M --------------------------------------------------
MUL_3629|M.ulcerans_Agy99 --------------------------------------------------
MAV_2020|M.avium_104 --------------------------------------------------
MSMEG_5319|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2219|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_3943|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
Mb3360|M.bovis_AF2122/97 ELIWGIEDCRNMSARLERDLLAAGQQVVRVPTKLMAQTRKSARSRGKSDP
Rv3327|M.tuberculosis_H37Rv ELIWGIEDCRNMSARLERDLLAAGQQVVRVPTKLMAQTRKSARSRGKSDP
MMAR_3686|M.marinum_M --------------------------------------------------
MUL_3629|M.ulcerans_Agy99 --------------------------------------------------
MAV_2020|M.avium_104 --------------------------------------------------
MSMEG_5319|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2219|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_3943|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
Mb3360|M.bovis_AF2122/97 IDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQRTSAINRLR
Rv3327|M.tuberculosis_H37Rv IDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQRTSAINRLR
MMAR_3686|M.marinum_M --------------------------------------------------
MUL_3629|M.ulcerans_Agy99 --------------------------------------------------
MAV_2020|M.avium_104 --------------------------------------------------
MSMEG_5319|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2219|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_3943|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
Mb3360|M.bovis_AF2122/97 WLVHELDPERAPAARSLDAAKHQQALRTWLDTQPGLVAELARAELTDIIR
Rv3327|M.tuberculosis_H37Rv WLVHELDPERAPAARSLDAAKHQQALRTWLDTQPGLVAELARAELTDIIR
MMAR_3686|M.marinum_M --------------------------------------------------
MUL_3629|M.ulcerans_Agy99 --------------------------------------------------
MAV_2020|M.avium_104 --------------------------------------------------
MSMEG_5319|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2219|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_3943|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
Mb3360|M.bovis_AF2122/97 LTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGEAAGVTRFKSE
Rv3327|M.tuberculosis_H37Rv LTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGEAAGVTRFKSE
MMAR_3686|M.marinum_M --------------------------------------------------
MUL_3629|M.ulcerans_Agy99 --------------------------------------------------
MAV_2020|M.avium_104 --------------------------------------------------
MSMEG_5319|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2219|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_3943|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
Mb3360|M.bovis_AF2122/97 AAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDS
Rv3327|M.tuberculosis_H37Rv AAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDS
MMAR_3686|M.marinum_M ----------------------------------------MSRLVGVSD-
MUL_3629|M.ulcerans_Agy99 --------------------------------------------MGVSD-
MAV_2020|M.avium_104 ----------------------------------------MSRLPGVSD-
MSMEG_5319|M.smegmatis_MC2_155 --------------------------------------------------
Mvan_2219|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_3943|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK ------------------MGHCGPTVDDMT--------------------
TH_1616|M.thermoresistible__bu ----------------------VDRNSAVP--------------------
Mb3360|M.bovis_AF2122/97 RGQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQPAA
Rv3327|M.tuberculosis_H37Rv RGQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQPAA
MMAR_3686|M.marinum_M ---------HDAGIAAKIAFFFTKRKLAR---------------------
MUL_3629|M.ulcerans_Agy99 ---------HDAGIAAKIAFFFTKRKLAR---------------------
MAV_2020|M.avium_104 ---------RDAGLGARIAFFFTRRKLAQ---------------------
MSMEG_5319|M.smegmatis_MC2_155 ----------------------------------------------MSS-
Mvan_2219|M.vanbaalenii_PYR-1 ----------------------------------------------MTA-
MAB_3943|M.abscessus_ATCC_1997 ----------------------------------------------MSEH
Mflv_1182|M.gilvum_PYR-GCK -------------------------------------------QTLATRS
TH_1616|M.thermoresistible__bu -------------------------------------------QTPEVTM
Mb3360|M.bovis_AF2122/97 ACHRSYCSSHLGEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKRRFG
Rv3327|M.tuberculosis_H37Rv ACHRSYCSSHLGEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKRRFG
MMAR_3686|M.marinum_M -------------------------------------------MAGLATA
MUL_3629|M.ulcerans_Agy99 -------------------------------------------MAGLATA
MAV_2020|M.avium_104 -------------------------------------------MTGLETA
MSMEG_5319|M.smegmatis_MC2_155 RPALNTALPEAYKSVITLNEQCEKAAADAG--VSPLAVELVRIRASQING
Mvan_2219|M.vanbaalenii_PYR-1 RTLLSSAVPNAYQTMITLSGQADKAALDAG--VDPLTLELVRIRASQLNG
MAB_3943|M.abscessus_ATCC_1997 RVYIDKQTPSVYQGLSKTAAELRARAADTG--LSRTTLELVNIRVSQLNR
Mflv_1182|M.gilvum_PYR-GCK RLKIYKASPELYDAMMVLS-----TAAAKD--VDPALGELIKIRASQMNR
TH_1616|M.thermoresistible__bu DARINLLDNPLGAKFLKHLVAANAVIDGSS--LPAATRELVKIRASQING
Mb3360|M.bovis_AF2122/97 EVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVRELAVFWTARSIG
Rv3327|M.tuberculosis_H37Rv EVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVRELAVFWTARSIG
MMAR_3686|M.marinum_M DMLEPLRMYAHIPRLLNAYGRLEQAESKLD-VLTARHRALAELKAATTVG
MUL_3629|M.ulcerans_Agy99 DMLEPLRIYAHIPRLLNAYGRLEQAESKLD-VLTARHRALAELKAATTVG
MAV_2020|M.avium_104 GMLEPLRMYAHIPRLLNAHGRLEQAESRLD-ILSPRHRALAELKAATTVR
. . : * : .:
MSMEG_5319|M.smegmatis_MC2_155 CAFCLRMHVRDALAKGESTDRIAVIPAWRETA-YFTDEERAALAIAEEIT
Mvan_2219|M.vanbaalenii_PYR-1 CGFCLRLHVRDALAKGETTDRLAVLPAWRETD-YFTPAERAALAIAEEIT
MAB_3943|M.abscessus_ATCC_1997 CLFCLDLHTRVALEEGESAQRIAVLPVWQEAE-LFSDVERAALTIAEAVT
Mflv_1182|M.gilvum_PYR-GCK CAFCLDMHTRDARKIGVSEQKLDLLSAWAEAAGVFDDAERAALALTEAIT
TH_1616|M.thermoresistible__bu CAFCLDMHTKDAAHAGETATRLHLVAAWREAT-VFTEAERAALELAEQGT
Mb3360|M.bovis_AF2122/97 CSWCVDFGAMLQRLDGLDVDRLTDIDNYATSS-KFSDDERAAIAYAEAMT
Rv3327|M.tuberculosis_H37Rv CSWCVDFGAMLQRLDGLDVDRLTDIDNYATSS-KFSDDERAAIAYAEAMT
MMAR_3686|M.marinum_M CQYCIDLGSQIARELGISDQELLALANYRDAS-CFSEVDRLILDYAAAIS
MUL_3629|M.ulcerans_Agy99 CQYCIDLGSQIARELGISDQELLALANYRDAS-CFSEVDRLILDYAAAIS
MAV_2020|M.avium_104 CEYCIDLGSQIARRWGITDEELLAMADYRDAA-CFSDVDKLILEYATAIS
* :*: : * .: : : : * :: : : :
MSMEG_5319|M.smegmatis_MC2_155 DISNP---PRASDAELLTALSTQQVAVLRWLAVTINAFNRIAISSHYKVG
Mvan_2219|M.vanbaalenii_PYR-1 GIGTR---AAGIDDDT-AAVDGQQAAALRWVAIAINAFNRIAISSRYTIK
MAB_3943|M.abscessus_ATCC_1997 EVTDHH-LTDEQYTAVREHLSDDQVSVLVWSAIMINTFNRISILSRHPIK
Mflv_1182|M.gilvum_PYR-GCK ELGHAG-VSDDVYEDAAAVFSDRELGQVIAMAVTINAWNRINAAVRTPPP
TH_1616|M.thermoresistible__bu RLADGGGVTDDAWARAAKHHDEEQLAALVGLIVLINAFNRGNVIVGQPAG
Mb3360|M.bovis_AF2122/97 ADPHS--VTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSALGITEQ
Rv3327|M.tuberculosis_H37Rv ADPHS--VTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSALGITEQ
MMAR_3686|M.marinum_M RTPVA--VSDELFAALRAHFDAAALVGLTHIITLGNLRARFNIALGIGSS
MUL_3629|M.ulcerans_Agy99 RTPVA--VSDELFAALRAHFDAAALVGLTHIITLGNLRARFNIALGIGSS
MAV_2020|M.avium_104 RTPVE--VSDELFDALRAHFDTAQLVGLTHVITLGNLRARFNIALGIGSS
. . : * *
MSMEG_5319|M.smegmatis_MC2_155 P----------------------
Mvan_2219|M.vanbaalenii_PYR-1 P----------------------
MAB_3943|M.abscessus_ATCC_1997 RR---------------------
Mflv_1182|M.gilvum_PYR-GCK RR---------------------
TH_1616|M.thermoresistible__bu DYQPGQFG---------------
Mb3360|M.bovis_AF2122/97 GFNSGDACRVPWAAPDVPSAESR
Rv3327|M.tuberculosis_H37Rv GFNSGDACRVPWAAPDVPSAESR
MMAR_3686|M.marinum_M GFSSDRVCALPEGAGPP------
MUL_3629|M.ulcerans_Agy99 GFSSDRVCALPEGAGPP------
MAV_2020|M.avium_104 GFSGNRVCALPDTPRP-------