For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGHCGPTVDDMTQTLATRSRLKIYKASPELYDAMMVLSTAAAKDVDPALGELIKIRASQMNRCAFCLDMH TRDARKIGVSEQKLDLLSAWAEAAGVFDDAERAALALTEAITELGHAGVSDDVYEDAAAVFSDRELGQVI AMAVTINAWNRINAAVRTPPPRR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_1182 | - | - | 100% (163) | alkylhydroperoxidase |
| M. gilvum PYR-GCK | Mflv_2734 | - | 6e-07 | 25.98% (127) | hypothetical protein Mflv_2734 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3360 | - | 3e-05 | 26.72% (116) | transposase |
| M. tuberculosis H37Rv | Rv3327 | - | 3e-05 | 26.72% (116) | transposase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0197 | - | 8e-46 | 61.29% (155) | putative alkylhydroperoxidase AhpD core |
| M. marinum M | MMAR_3686 | - | 3e-06 | 28.99% (138) | hypothetical protein MMAR_3686 |
| M. avium 104 | MAV_2093 | - | 9e-08 | 25.98% (127) | hypothetical protein MAV_2093 |
| M. smegmatis MC2 155 | MSMEG_6370 | pcaC | 7e-55 | 67.32% (153) | 4-carboxymuconolactone decarboxylase |
| M. thermoresistible (build 8) | TH_1616 | pcaC | 1e-22 | 49.56% (113) | 4-carboxymuconolactone decarboxylase |
| M. ulcerans Agy99 | MUL_3629 | - | 8e-07 | 29.71% (138) | hypothetical protein MUL_3629 |
| M. vanbaalenii PYR-1 | Mvan_5624 | - | 2e-68 | 79.01% (162) | alkylhydroperoxidase |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3360|M.bovis_AF2122/97 MVVVGTDAHKYSHTFVATDEVGRQLGEKTVKATTAGHATAIMWAREQFGL
Rv3327|M.tuberculosis_H37Rv MVVVGTDAHKYSHTFVATDEVGRQLGEKTVKATTAGHATAIMWAREQFGL
MMAR_3686|M.marinum_M --------------------------------------------------
MUL_3629|M.ulcerans_Agy99 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5624|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6370|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0197|M.abscessus_ATCC_1997 --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
MAV_2093|M.avium_104 --------------------------------------------------
Mb3360|M.bovis_AF2122/97 ELIWGIEDCRNMSARLERDLLAAGQQVVRVPTKLMAQTRKSARSRGKSDP
Rv3327|M.tuberculosis_H37Rv ELIWGIEDCRNMSARLERDLLAAGQQVVRVPTKLMAQTRKSARSRGKSDP
MMAR_3686|M.marinum_M --------------------------------------------------
MUL_3629|M.ulcerans_Agy99 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5624|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6370|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0197|M.abscessus_ATCC_1997 --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
MAV_2093|M.avium_104 --------------------------------------------------
Mb3360|M.bovis_AF2122/97 IDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQRTSAINRLR
Rv3327|M.tuberculosis_H37Rv IDALAVARAVLRETDLPLATHDETSRELKLLTDRRDVLVAQRTSAINRLR
MMAR_3686|M.marinum_M --------------------------------------------------
MUL_3629|M.ulcerans_Agy99 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5624|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6370|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0197|M.abscessus_ATCC_1997 --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
MAV_2093|M.avium_104 --------------------------------------------------
Mb3360|M.bovis_AF2122/97 WLVHELDPERAPAARSLDAAKHQQALRTWLDTQPGLVAELARAELTDIIR
Rv3327|M.tuberculosis_H37Rv WLVHELDPERAPAARSLDAAKHQQALRTWLDTQPGLVAELARAELTDIIR
MMAR_3686|M.marinum_M --------------------------------------------------
MUL_3629|M.ulcerans_Agy99 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5624|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6370|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0197|M.abscessus_ATCC_1997 --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
MAV_2093|M.avium_104 --------------------------------------------------
Mb3360|M.bovis_AF2122/97 LTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGEAAGVTRFKSE
Rv3327|M.tuberculosis_H37Rv LTGEINTLAQRISARVHQVAPALLEIPGCAELTAAKIVGEAAGVTRFKSE
MMAR_3686|M.marinum_M --------------------------------------------------
MUL_3629|M.ulcerans_Agy99 --------------------------------------------------
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5624|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6370|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0197|M.abscessus_ATCC_1997 --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
MAV_2093|M.avium_104 -------------------MAAPVSLREDQLTRLVAVFPGSPSEARVAAL
Mb3360|M.bovis_AF2122/97 AAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDS
Rv3327|M.tuberculosis_H37Rv AAFACHAAVAPIPVWSGNTAGQMRLSRSGNRQLNAALHRIALTQIRMTDS
MMAR_3686|M.marinum_M ----------------------------------------MSRLVGVSD-
MUL_3629|M.ulcerans_Agy99 --------------------------------------------MGVSD-
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5624|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6370|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0197|M.abscessus_ATCC_1997 --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
MAV_2093|M.avium_104 IRRVCAQTSSLPPLPAPMEVGEPESETEAAVAEFAEQFSADVSAITHAQR
Mb3360|M.bovis_AF2122/97 RGQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQPAA
Rv3327|M.tuberculosis_H37Rv RGQAYYQRLQDAGKTKRAALRCLKRRLARTVFQALRTVHQPSSEHTQPAA
MMAR_3686|M.marinum_M ---------HDAGIAAKIAFFFTKRKLAR---------------------
MUL_3629|M.ulcerans_Agy99 ---------HDAGIAAKIAFFFTKRKLAR---------------------
Mflv_1182|M.gilvum_PYR-GCK ------------MGHCGPTVDDMTQTLATR--------------------
Mvan_5624|M.vanbaalenii_PYR-1 --------MNHLRGPVGASVEDMTQTLTTQ--------------------
MSMEG_6370|M.smegmatis_MC2_155 ----------------------MTQTLEST--------------------
MAB_0197|M.abscessus_ATCC_1997 ----------------------MTSTLNS---------------------
TH_1616|M.thermoresistible__bu --------------VDRNSAVPQTPEVTMD--------------------
MAV_2093|M.avium_104 SRLSKQLGDRTFGVVVQMYIADFVPRVRAG--------------------
:
Mb3360|M.bovis_AF2122/97 ACHRSYCSSHLGEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKRRFG
Rv3327|M.tuberculosis_H37Rv ACHRSYCSSHLGEPPRLTDMTQKTRIQPLPPKRAGLLIRALYRIAKRRFG
MMAR_3686|M.marinum_M -------------------------------------------MAGLATA
MUL_3629|M.ulcerans_Agy99 -------------------------------------------MAGLATA
Mflv_1182|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_5624|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_6370|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0197|M.abscessus_ATCC_1997 --------------------------------------------------
TH_1616|M.thermoresistible__bu --------------------------------------------------
MAV_2093|M.avium_104 --------------------------------------LDALEVGSRYLG
Mb3360|M.bovis_AF2122/97 EVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVRELAVFWTARSIG
Rv3327|M.tuberculosis_H37Rv EVPEPFTVTAHHRRLLIANVVHEALLQRASRKLPPSVRELAVFWTARSIG
MMAR_3686|M.marinum_M DMLEPLRMYAHIPRLLNAYGRLEQAESKLD-VLTARHRALAELKAATTVG
MUL_3629|M.ulcerans_Agy99 DMLEPLRIYAHIPRLLNAYGRLEQAESKLD-VLTARHRALAELKAATTVG
Mflv_1182|M.gilvum_PYR-GCK ---SRLKIYK--ASPELYDAMMVLSTAA-AKDVDPALGELIKIRASQMNR
Mvan_5624|M.vanbaalenii_PYR-1 ---DRLKIYK--ASPELYDAMMTLSTAA-AKDVDPELAELIKIRASQLNH
MSMEG_6370|M.smegmatis_MC2_155 ---ERVKIYK--AFPEFYDAMMNLSATS-AKDFDHTIGELVKIRASQINR
MAB_0197|M.abscessus_ATCC_1997 ---PRIRMDK--VSPEVYEAMMALSIAS-AKDVEPSLAELIKIRASQLNH
TH_1616|M.thermoresistible__bu ---ARINLLDNPLGAKFLKHLVAANAVIDGSSLPAATRELVKIRASQING
MAV_2093|M.avium_104 WLSGPISWDYGSDPSDLVFNDFLIAVAR-MRALDPVTSELVRLRGAAQHH
. . * : :
Mb3360|M.bovis_AF2122/97 CSWCVDFGAMLQRLDGLDVDRLTDIDNYATS-SKFSDDERAAIAYAEAMT
Rv3327|M.tuberculosis_H37Rv CSWCVDFGAMLQRLDGLDVDRLTDIDNYATS-SKFSDDERAAIAYAEAMT
MMAR_3686|M.marinum_M CQYCIDLGSQIARELGISDQELLALANYRDA-SCFSEVDRLILDYAAAIS
MUL_3629|M.ulcerans_Agy99 CQYCIDLGSQIARELGISDQELLALANYRDA-SCFSEVDRLILDYAAAIS
Mflv_1182|M.gilvum_PYR-GCK CAFCLDMHTRDARKIGVSEQKLDLLSAWAEAAGVFDDAERAALALTEAIT
Mvan_5624|M.vanbaalenii_PYR-1 CAFCLDMHTRDARKAGVGEQKLDVLAAWTEAGELFGERERAALALTEAVT
MSMEG_6370|M.smegmatis_MC2_155 CGFCLDMHARDARKQGETEQRLALIAAWEEAGDLFTEREQAALALTEAVT
MAB_0197|M.abscessus_ATCC_1997 CAFCLDMHTHDARKQGETEQRIYLLNAWAEAGDIYTDREKAALALTEEAT
TH_1616|M.thermoresistible__bu CAFCLDMHTKDAAHAGETATRLHLVAAWREA-TVFTEAERAALELAEQGT
MAV_2093|M.avium_104 CRLCNSLREGSALDAGGSETLYEEIERFESS-GLLDERAKAALRYTDALI
* * .: * : : : : : : :
Mb3360|M.bovis_AF2122/97 ADPH--SVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSALGITEQ
Rv3327|M.tuberculosis_H37Rv ADPH--SVTDEQVADLRARFGEAGVIELTYQIGVENMRARMNSALGITEQ
MMAR_3686|M.marinum_M RTPV--AVSDELFAALRAHFDAAALVGLTHIITLGNLRARFNIALGIGSS
MUL_3629|M.ulcerans_Agy99 RTPV--AVSDELFAALRAHFDAAALVGLTHIITLGNLRARFNIALGIGSS
Mflv_1182|M.gilvum_PYR-GCK ELGH-AGVSDDVYEDAAAVFSDRELGQVIAMAVTINAWNRINAAVRTPP-
Mvan_5624|M.vanbaalenii_PYR-1 ELGR-DGVPDDVYARAAAVFSDRELGQVIAMVVTINAWNRINVAVRMPI-
MSMEG_6370|M.smegmatis_MC2_155 EINR-GPVSDDVYERAAAVFSERELSQLIAMIVTINAWNRINVTVKMPF-
MAB_0197|M.abscessus_ATCC_1997 VLSAGEHVSDATYARAAAEFTERELGQIIGMILTINAWNRIAVTTRNAP-
TH_1616|M.thermoresistible__bu RLADGGGVTDDAWARAAKHHDEEQLAALVGLIVLINAFNRGNVIVGQPAG
MAV_2093|M.avium_104 WTPA--HLVADDVAEVRSRFSEAEAVELTFDIMRN-ASNKVAVSLAADAP
: . : :
Mb3360|M.bovis_AF2122/97 GFNSGDACRVPWAAPDVPSAESR
Rv3327|M.tuberculosis_H37Rv GFNSGDACRVPWAAPDVPSAESR
MMAR_3686|M.marinum_M GFSSDRVCALPEGAGPP------
MUL_3629|M.ulcerans_Agy99 GFSSDRVCALPEGAGPP------
Mflv_1182|M.gilvum_PYR-GCK ---PRR-----------------
Mvan_5624|M.vanbaalenii_PYR-1 ---PRR-----------------
MSMEG_6370|M.smegmatis_MC2_155 ---PRR-----------------
MAB_0197|M.abscessus_ATCC_1997 ---VRRG----------------
TH_1616|M.thermoresistible__bu DYQPGQFG---------------
MAV_2093|M.avium_104 RVENGTQRYLIGADGQTVFS---