For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SNTETTPTETRCEGGPCPLDDAGRPVVEILTPREVPLGGPRAMTVLRTLPQAQRSLIGAWCFADHYGPDD IGQTGGMDVAPHPHTGLQTVSWLFTGEIEHRDSSGVHAMVRPGELNLMTGGRGICHSEVSTAQTTTLHGV QLWVALPDESRDAARDFQHYAPDAVVAGGVSLRVFLGTLAGQVSPVRTATPLLGAELLLEPHSTARFDVD AGFEHGLLVDTEAIEFSGSRLTRGELGYVGTGVEQLTVTNPTETTARAILLGGKPFGEQIVMWWNFVGRD HDEIAAFREEWQAESERFGRVEGYQGAVPRLPAPPLPRVRMVPRRNAPTANPGYATP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3941c | - | - | 100% (338) | hypothetical protein MAB_3941c |
M. abscessus ATCC 19977 | MAB_2446c | - | 1e-20 | 27.63% (304) | putative pirin-like protein |
M. abscessus ATCC 19977 | MAB_4561 | - | 8e-09 | 29.73% (111) | hypothetical protein MAB_4561 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0187c | - | 6e-15 | 32.52% (123) | hypothetical protein Mb0187c |
M. gilvum PYR-GCK | Mflv_0788 | - | 1e-117 | 62.15% (325) | pirin domain-containing protein |
M. tuberculosis H37Rv | Rv0181c | - | 6e-15 | 32.52% (123) | hypothetical protein Rv0181c |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_0040 | - | 1e-111 | 61.23% (325) | hypothetical protein MMAR_0040 |
M. avium 104 | MAV_0038 | - | 1e-106 | 58.46% (325) | hypothetical protein MAV_0038 |
M. smegmatis MC2 155 | MSMEG_0049 | - | 1e-112 | 61.16% (327) | pirin domain-containing protein |
M. thermoresistible (build 8) | TH_1360 | - | 7e-83 | 65.95% (232) | pirin domain protein |
M. ulcerans Agy99 | MUL_0039 | - | 3e-95 | 60.66% (272) | hypothetical protein MUL_0039 |
M. vanbaalenii PYR-1 | Mvan_0062 | - | 1e-116 | 61.77% (327) | pirin domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_0788|M.gilvum_PYR-GCK MSNTDTAPDEVDCVASGFAG---------VLHPREVPLGGPRAIRVRRTL Mvan_0062|M.vanbaalenii_PYR-1 MSNTDPAPAEVDCVASPFAG---------VLHPREVPLGGPRAIRVRRTL MSMEG_0049|M.smegmatis_MC2_155 MSNTDVAPSEVTCGPSRFTG---------VLHAREVPLGGPRAIAVRRTL MMAR_0040|M.marinum_M MSNLETAPAEVACCAAQGA-------GIEVLHPREVPLGGPRAIRVQRTL MUL_0039|M.ulcerans_Agy99 --------MPVSRCCIRG----------KCRWVGRVQSGCNARFRSGR-- MAV_0038|M.avium_104 MSNLEVAPAEVACAASRDRDASP---AVQILRPREVPLGGPRALRVQRTL MAB_3941c|M.abscessus_ATCC_199 MSNTETTPTETRCEGGPCPLDDAGRPVVEILTPREVPLGGPRAMTVLRTL TH_1360|M.thermoresistible__bu MSNTETAPVEVTCGVEPFTG--------AVLRPREVPLGGPRAMPVRRTL Mb0187c|M.bovis_AF2122/97 ----MTATVEIRRAADRAVT--------------TTSWLKSRHSFSFGDH Rv0181c|M.tuberculosis_H37Rv ----MTATVEIRRAADRAVT--------------TTSWLKSRHSFSFGDH . Mflv_0788|M.gilvum_PYR-GCK PQRERSLIGAWCFADHYGPHDVRGGTGMDVPPHPHTGLQTVSWLFSGEVE Mvan_0062|M.vanbaalenii_PYR-1 PQRERSLIGAWCFADHYGPHDVRGGTGMDVPPHPHTGLQTVSWLFSGEVE MSMEG_0049|M.smegmatis_MC2_155 PQRDRTLIGAWCFADHYGPHDVRSGPGMDVPPHPHTGLQTVSWLFAGEIE MMAR_0040|M.marinum_M PQRQRSLIGAWCFVDHYGPVSAH----MDVAPHPHTGLQTVSWLFGGEVE MUL_0039|M.ulcerans_Agy99 ----RSLIGAWCFVDHYGPVSAH----MDVAPHPHTGLQTVSWLFSGEVE MAV_0038|M.avium_104 PQRERSLIGAWCFIDHYGPAHTR----MDVPPHPHTGLQTVSWLFSGEVE MAB_3941c|M.abscessus_ATCC_199 PQAQRSLIGAWCFADHYGPDDIGQTGGMDVAPHPHTGLQTVSWLFTGEIE TH_1360|M.thermoresistible__bu PQRKRSLIGAWCFIDHYGPQDVRTGPGMDVAPHPHTGLQTVSWLFAGEIE Mb0187c|M.bovis_AF2122/97 YDPDNTHHGLLLVNNDDQMEPAS-----GFDPHPHRDMEIVTWVLRGALR Rv0181c|M.tuberculosis_H37Rv YDPDNTHHGLLLVNNDDQMEPAS-----GFDPHPHRDMEIVTWVLRGALR .: * . :. .. **** .:: *:*:: * :. Mflv_0788|M.gilvum_PYR-GCK HRDSAGVHAMVRPGELNLMTAGAGICHSEVSTASTTVLHGAQLWVALPES Mvan_0062|M.vanbaalenii_PYR-1 HRDSAGVHAMVRPGELNLMTAGAGICHSEVSTGATEILHGAQLWVALPES MSMEG_0049|M.smegmatis_MC2_155 HRDSGGVHAMVRPGELNLMTAGAGICHSEVSTKAASVLHGVQLWVALPAA MMAR_0040|M.marinum_M HRDSAGVHARIRPGELNLMTAGAGICHSEVSVGSG-VLHGAQLWVALPDS MUL_0039|M.ulcerans_Agy99 HRDSAGVHARIRPGELNMMTAGAGICHSEVSVGSG-VLHGAQLWVALPDS MAV_0038|M.avium_104 HRDSAGVHAAVRPGELNLMTAGAGICHSEVSVGSG-ALHGVQLWVVLPDS MAB_3941c|M.abscessus_ATCC_199 HRDSSGVHAMVRPGELNLMTGGRGICHSEVSTAQTTTLHGVQLWVALPDE TH_1360|M.thermoresistible__bu HRDSGGVHAMVRPGELNLMTAGRGICHSEVSTAATEVLHGVQLWVALPDS Mb0187c|M.bovis_AF2122/97 HQDSAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDAT Rv0181c|M.tuberculosis_H37Rv HQDSAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDAT *:**.* . : ** : *:.* ** ***:. :* .*:** Mflv_0788|M.gilvum_PYR-GCK DRNTERDFAHYVPPARTTGGVTTRVFLGELDGQRSPVHTFTPLLGAQLDL Mvan_0062|M.vanbaalenii_PYR-1 DRDTDRDFAHYAPTPRQVGAVTTRVFLGELEGQRSPVHTFTPLLGAQLDL MSMEG_0049|M.smegmatis_MC2_155 ARDTDRDFAHYAPTPRVIGSSTLRVFLGELGDSRSPVHTFTPLLGAQIDL MMAR_0040|M.marinum_M ARDTGRDFAHYAPAPAVLPGARARVFIGELAGLRSPVHTFTPLLGAQLDL MUL_0039|M.ulcerans_Agy99 VRDTGRDFAHYAPAPAVLPGARARVFIGELAGVRSPVHTFTPLLGAQLDL MAV_0038|M.avium_104 DRDTARDFAHYAPAPISLPGAQARVFLGELHGSRSPVRTFTPLVGAQIDL MAB_3941c|M.abscessus_ATCC_199 SRDAARDFQHYAPDAVVAGGVSLRVFLGTLAGQVSPVRTATPLLGAELLL TH_1360|M.thermoresistible__bu DRDTARDFIHFVPRPHELDDARLLVFLGDLAGARSPVPTFTPLLGAQIDL Mb0187c|M.bovis_AF2122/97 GITASYQQQEIDDELLRAGLVTIASGIPGQDAALTLHNSSASLHGAR--L Rv0181c|M.tuberculosis_H37Rv GITASYQQQEIDDELLRAGLVTIASGIPGQDAALTLHNSSASLHGAR--L : : . : : : :.* **. * Mflv_0788|M.gilvum_PYR-GCK DPGVDVTLDVDAGFEHGVLVDRGDVQACGSALQVADLAFQGSGHDRLSLA Mvan_0062|M.vanbaalenii_PYR-1 DPGAEVSLDVDDRFEHGVLVDRGDVEACGSALAVADLAFQGTGHHRLHLL MSMEG_0049|M.smegmatis_MC2_155 APGAELTLDVDATFEHGVLLDRGAVEVAGTPLAVADLAYQRPGCHELHLA MMAR_0040|M.marinum_M DAHAELDIEVDPTFEHGVLCDAGDLELAGTALAAGDLGYQGPGNTTLHVR MUL_0039|M.ulcerans_Agy99 DAHAELDIEVDPTFEHGVLCDVGDLELAGTALAAGDLGYQGPDNTAVHVR MAV_0038|M.avium_104 GAGAQLDLDLDPDFEHGLLCDAGAVHVDEKPLSVAELAYLGPGRAAVQLR MAB_3941c|M.abscessus_ATCC_199 EPHSTARFDVDAGFEHGLLVDTEAIEFSGSRLTRGELGYVGTGVEQLTVT TH_1360|M.thermoresistible__bu YPNGRLTLDIDPGFEHGVLLDTGEVTVAGAALRX----------XARRAA Mb0187c|M.bovis_AF2122/97 RPGATVSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADARGLTAN Rv0181c|M.tuberculosis_H37Rv RPGATVSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADARGLTAN . : :. : . : Mflv_0788|M.gilvum_PYR-GCK NRGDGPARVLLLGGAPFTEELVMWWNFVGRSHDEIVAYREQWQQHDERFG Mvan_0062|M.vanbaalenii_PYR-1 NRGDIPARVLLLGGTPFTEDLVMWWNFVGRSHEDIARFREQWQNHDARFG MSMEG_0049|M.smegmatis_MC2_155 NTGTGPARVILLGGLPFGEELVMWWNFVGRSHDDIAAYRELWQDHDARFG MMAR_0040|M.marinum_M NIGAQPARLLLLGGTPFAEELVMWWNFVGRNHDEIVSYRQLWQDADARFG MUL_0039|M.ulcerans_Agy99 NVGAQPARLLLLGGTPFAEELVMWWNFVGRNHDEIVSYRQLWQDDDARFG MAV_0038|M.avium_104 NAGDTPGRVLLLGGTPFSEQLVMWWNFVGRSHEDIVGYRRLWEDGDERFG MAB_3941c|M.abscessus_ATCC_199 NPTETTARAILLGGKPFGEQIVMWWNFVGRDHDEIAAFREEWQAESERFG TH_1360|M.thermoresistible__bu DPGPGTAR---------------------TAGSRCAPNRRRRAPGSRRRG Mb0187c|M.bovis_AF2122/97 EPSE-----------------VLIWEMHAKLGDSAT-------------- Rv0181c|M.tuberculosis_H37Rv EPSE-----------------VLIWEMHAKLGDSAT-------------- : . . Mflv_0788|M.gilvum_PYR-GCK SVDGYTGTVTHLPAPPLPNATLRPRPAPGV-------- Mvan_0062|M.vanbaalenii_PYR-1 AVEGYRGAVTRLPAPPLPNATLRPRRHPGV-------- MSMEG_0049|M.smegmatis_MC2_155 AVSGYTGTLSRLPAPPLPNGRLKPRPNPAG-------- MMAR_0040|M.marinum_M EVVGYQGSVTRLPAPPLPTTRLLPRPLPNRE----DHR MUL_0039|M.ulcerans_Agy99 EVVGYQGSVTRLPAPPLPTTRLLPRPLPNRE----DHR MAV_0038|M.avium_104 AVRGYRGALSRLPAPPLPTARLRPRPIPERKGSTNDNR MAB_3941c|M.abscessus_ATCC_199 RVEGYQGAVPRLPAPPLPRVRMVPRRNAPTANPGYATP TH_1360|M.thermoresistible__bu APPRPSGRPVRAPGSPRAG------------------- Mb0187c|M.bovis_AF2122/97 -------------------------------------- Rv0181c|M.tuberculosis_H37Rv --------------------------------------