For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SNLEVAPAEVACAASRDRDASPAVQILRPREVPLGGPRALRVQRTLPQRERSLIGAWCFIDHYGPAHTRM DVPPHPHTGLQTVSWLFSGEVEHRDSAGVHAAVRPGELNLMTAGAGICHSEVSVGSGALHGVQLWVVLPD SDRDTARDFAHYAPAPISLPGAQARVFLGELHGSRSPVRTFTPLVGAQIDLGAGAQLDLDLDPDFEHGLL CDAGAVHVDEKPLSVAELAYLGPGRAAVQLRNAGDTPGRVLLLGGTPFSEQLVMWWNFVGRSHEDIVGYR RLWEDGDERFGAVRGYRGALSRLPAPPLPTARLRPRPIPERKGSTNDNR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_0038 | - | - | 100% (330) | hypothetical protein MAV_0038 |
| M. avium 104 | MAV_5152 | - | 1e-24 | 34.18% (237) | chromosome condensation protein |
| M. avium 104 | MAV_5002 | - | 3e-10 | 34.65% (101) | YhhW protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0187c | - | 4e-12 | 34.58% (107) | hypothetical protein Mb0187c |
| M. gilvum PYR-GCK | Mflv_0788 | - | 1e-123 | 66.77% (325) | pirin domain-containing protein |
| M. tuberculosis H37Rv | Rv0181c | - | 4e-12 | 34.58% (107) | hypothetical protein Rv0181c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3941c | - | 1e-106 | 58.46% (325) | hypothetical protein MAB_3941c |
| M. marinum M | MMAR_0040 | - | 1e-141 | 70.90% (323) | hypothetical protein MMAR_0040 |
| M. smegmatis MC2 155 | MSMEG_0049 | - | 1e-125 | 67.69% (325) | pirin domain-containing protein |
| M. thermoresistible (build 8) | TH_1360 | - | 7e-85 | 62.35% (255) | pirin domain protein |
| M. ulcerans Agy99 | MUL_0039 | - | 1e-121 | 71.69% (272) | hypothetical protein MUL_0039 |
| M. vanbaalenii PYR-1 | Mvan_0062 | - | 1e-128 | 69.23% (325) | pirin domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0040|M.marinum_M MSNLETAPAEVACCAAQGA-------GIEVLHPREVPLGGPRAIRVQRTL
MUL_0039|M.ulcerans_Agy99 --------MPVSRCCIRG----------KCRWVGRVQSGCNARFRSGR--
MAV_0038|M.avium_104 MSNLEVAPAEVACAASRDRDASP---AVQILRPREVPLGGPRALRVQRTL
Mflv_0788|M.gilvum_PYR-GCK MSNTDTAPDEVDCVASGFAG---------VLHPREVPLGGPRAIRVRRTL
Mvan_0062|M.vanbaalenii_PYR-1 MSNTDPAPAEVDCVASPFAG---------VLHPREVPLGGPRAIRVRRTL
MSMEG_0049|M.smegmatis_MC2_155 MSNTDVAPSEVTCGPSRFTG---------VLHAREVPLGGPRAIAVRRTL
MAB_3941c|M.abscessus_ATCC_199 MSNTETTPTETRCEGGPCPLDDAGRPVVEILTPREVPLGGPRAMTVLRTL
TH_1360|M.thermoresistible__bu MSNTETAPVEVTCGVEPFTG--------AVLRPREVPLGGPRAMPVRRTL
Mb0187c|M.bovis_AF2122/97 ----MTATVEIRRAADRAVT--------------TTSWLKSRHSFSFGDH
Rv0181c|M.tuberculosis_H37Rv ----MTATVEIRRAADRAVT--------------TTSWLKSRHSFSFGDH
.
MMAR_0040|M.marinum_M PQRQRSLIGAWCFVDHYGPVSAH----MDVAPHPHTGLQTVSWLFGGEVE
MUL_0039|M.ulcerans_Agy99 ----RSLIGAWCFVDHYGPVSAH----MDVAPHPHTGLQTVSWLFSGEVE
MAV_0038|M.avium_104 PQRERSLIGAWCFIDHYGPAHTR----MDVPPHPHTGLQTVSWLFSGEVE
Mflv_0788|M.gilvum_PYR-GCK PQRERSLIGAWCFADHYGPHDVRGGTGMDVPPHPHTGLQTVSWLFSGEVE
Mvan_0062|M.vanbaalenii_PYR-1 PQRERSLIGAWCFADHYGPHDVRGGTGMDVPPHPHTGLQTVSWLFSGEVE
MSMEG_0049|M.smegmatis_MC2_155 PQRDRTLIGAWCFADHYGPHDVRSGPGMDVPPHPHTGLQTVSWLFAGEIE
MAB_3941c|M.abscessus_ATCC_199 PQAQRSLIGAWCFADHYGPDDIGQTGGMDVAPHPHTGLQTVSWLFTGEIE
TH_1360|M.thermoresistible__bu PQRKRSLIGAWCFIDHYGPQDVRTGPGMDVAPHPHTGLQTVSWLFAGEIE
Mb0187c|M.bovis_AF2122/97 YDPDNTHHGLLLVNNDDQMEPAS-----GFDPHPHRDMEIVTWVLRGALR
Rv0181c|M.tuberculosis_H37Rv YDPDNTHHGLLLVNNDDQMEPAS-----GFDPHPHRDMEIVTWVLRGALR
.: * . :. .. **** .:: *:*:: * :.
MMAR_0040|M.marinum_M HRDSAGVHARIRPGELNLMTAGAGICHSEVSVGSG-VLHGAQLWVALPDS
MUL_0039|M.ulcerans_Agy99 HRDSAGVHARIRPGELNMMTAGAGICHSEVSVGSG-VLHGAQLWVALPDS
MAV_0038|M.avium_104 HRDSAGVHAAVRPGELNLMTAGAGICHSEVSVGSG-ALHGVQLWVVLPDS
Mflv_0788|M.gilvum_PYR-GCK HRDSAGVHAMVRPGELNLMTAGAGICHSEVSTASTTVLHGAQLWVALPES
Mvan_0062|M.vanbaalenii_PYR-1 HRDSAGVHAMVRPGELNLMTAGAGICHSEVSTGATEILHGAQLWVALPES
MSMEG_0049|M.smegmatis_MC2_155 HRDSGGVHAMVRPGELNLMTAGAGICHSEVSTKAASVLHGVQLWVALPAA
MAB_3941c|M.abscessus_ATCC_199 HRDSSGVHAMVRPGELNLMTGGRGICHSEVSTAQTTTLHGVQLWVALPDE
TH_1360|M.thermoresistible__bu HRDSGGVHAMVRPGELNLMTAGRGICHSEVSTAATEVLHGVQLWVALPDS
Mb0187c|M.bovis_AF2122/97 HQDSAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDAT
Rv0181c|M.tuberculosis_H37Rv HQDSAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDAT
*:**.* . : ** : *:.* ** ***:. :* .*:**
MMAR_0040|M.marinum_M ARDTGRDFAHYAPAPAVLPGARARVFIGELAGLRSPVHTFTPLLGAQLDL
MUL_0039|M.ulcerans_Agy99 VRDTGRDFAHYAPAPAVLPGARARVFIGELAGVRSPVHTFTPLLGAQLDL
MAV_0038|M.avium_104 DRDTARDFAHYAPAPISLPGAQARVFLGELHGSRSPVRTFTPLVGAQIDL
Mflv_0788|M.gilvum_PYR-GCK DRNTERDFAHYVPPARTTGGVTTRVFLGELDGQRSPVHTFTPLLGAQLDL
Mvan_0062|M.vanbaalenii_PYR-1 DRDTDRDFAHYAPTPRQVGAVTTRVFLGELEGQRSPVHTFTPLLGAQLDL
MSMEG_0049|M.smegmatis_MC2_155 ARDTDRDFAHYAPTPRVIGSSTLRVFLGELGDSRSPVHTFTPLLGAQIDL
MAB_3941c|M.abscessus_ATCC_199 SRDAARDFQHYAPDAVVAGGVSLRVFLGTLAGQVSPVRTATPLLGAELLL
TH_1360|M.thermoresistible__bu DRDTARDFIHFVPRPHELDDARLLVFLGDLAGARSPVPTFTPLLGAQIDL
Mb0187c|M.bovis_AF2122/97 GITASYQQQEIDDELLRAGLVTIASGIPGQDAALTLHNSSASLHGAR--L
Rv0181c|M.tuberculosis_H37Rv GITASYQQQEIDDELLRAGLVTIASGIPGQDAALTLHNSSASLHGAR--L
: : . : : : :.* **. *
MMAR_0040|M.marinum_M DAHAELDIEVDPTFEHGVLCDAGDLELAGTALAAGDLGYQGPGNTTLHVR
MUL_0039|M.ulcerans_Agy99 DAHAELDIEVDPTFEHGVLCDVGDLELAGTALAAGDLGYQGPDNTAVHVR
MAV_0038|M.avium_104 GAGAQLDLDLDPDFEHGLLCDAGAVHVDEKPLSVAELAYLGPGRAAVQLR
Mflv_0788|M.gilvum_PYR-GCK DPGVDVTLDVDAGFEHGVLVDRGDVQACGSALQVADLAFQGSGHDRLSLA
Mvan_0062|M.vanbaalenii_PYR-1 DPGAEVSLDVDDRFEHGVLVDRGDVEACGSALAVADLAFQGTGHHRLHLL
MSMEG_0049|M.smegmatis_MC2_155 APGAELTLDVDATFEHGVLLDRGAVEVAGTPLAVADLAYQRPGCHELHLA
MAB_3941c|M.abscessus_ATCC_199 EPHSTARFDVDAGFEHGLLVDTEAIEFSGSRLTRGELGYVGTGVEQLTVT
TH_1360|M.thermoresistible__bu YPNGRLTLDIDPGFEHGVLLDTGEVTVAGAALRX----------XARRAA
Mb0187c|M.bovis_AF2122/97 RPGATVSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADARGLTAN
Rv0181c|M.tuberculosis_H37Rv RPGATVSLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADARGLTAN
. : :. : . :
MMAR_0040|M.marinum_M NIGAQPARLLLLGGTPFAEELVMWWNFVGRNHDEIVSYRQLWQDADARFG
MUL_0039|M.ulcerans_Agy99 NVGAQPARLLLLGGTPFAEELVMWWNFVGRNHDEIVSYRQLWQDDDARFG
MAV_0038|M.avium_104 NAGDTPGRVLLLGGTPFSEQLVMWWNFVGRSHEDIVGYRRLWEDGDERFG
Mflv_0788|M.gilvum_PYR-GCK NRGDGPARVLLLGGAPFTEELVMWWNFVGRSHDEIVAYREQWQQHDERFG
Mvan_0062|M.vanbaalenii_PYR-1 NRGDIPARVLLLGGTPFTEDLVMWWNFVGRSHEDIARFREQWQNHDARFG
MSMEG_0049|M.smegmatis_MC2_155 NTGTGPARVILLGGLPFGEELVMWWNFVGRSHDDIAAYRELWQDHDARFG
MAB_3941c|M.abscessus_ATCC_199 NPTETTARAILLGGKPFGEQIVMWWNFVGRDHDEIAAFREEWQAESERFG
TH_1360|M.thermoresistible__bu DPGPGTAR---------------------TAGSRCAPNRRRRAPGSRRRG
Mb0187c|M.bovis_AF2122/97 EPSE-----------------VLIWEMHAKLGDSAT--------------
Rv0181c|M.tuberculosis_H37Rv EPSE-----------------VLIWEMHAKLGDSAT--------------
: . .
MMAR_0040|M.marinum_M EVVGYQGSVTRLPAPPLPTTRLLPRPLPNRE----DHR
MUL_0039|M.ulcerans_Agy99 EVVGYQGSVTRLPAPPLPTTRLLPRPLPNRE----DHR
MAV_0038|M.avium_104 AVRGYRGALSRLPAPPLPTARLRPRPIPERKGSTNDNR
Mflv_0788|M.gilvum_PYR-GCK SVDGYTGTVTHLPAPPLPNATLRPRPAPGV--------
Mvan_0062|M.vanbaalenii_PYR-1 AVEGYRGAVTRLPAPPLPNATLRPRRHPGV--------
MSMEG_0049|M.smegmatis_MC2_155 AVSGYTGTLSRLPAPPLPNGRLKPRPNPAG--------
MAB_3941c|M.abscessus_ATCC_199 RVEGYQGAVPRLPAPPLPRVRMVPRRNAPTANPGYATP
TH_1360|M.thermoresistible__bu APPRPSGRPVRAPGSPRAG-------------------
Mb0187c|M.bovis_AF2122/97 --------------------------------------
Rv0181c|M.tuberculosis_H37Rv --------------------------------------