For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AKPKQPPSYDLKKAEQRRSQLIQIGLTAIVVLFAVGLVGFIVLSNKKDEGPPAPPAGEVKAIQVVTPGPA KLITKEGTTEPKVVLTLIEDPICPACAMFEQEFGPTVKKLIDTGAVRADYDMVGILDVPRLKRDYSSRAS AAAYCVADQSQELFLKFHSVLYDPSKQPDEVNSKTWHDDKWLIDQAKAVGASDAVAKCIKDKKYINMVKE LGPKLNIQATPTIRINGKDWEIGKGTTPDDLIKAVTDITGPVPGLK*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_3269c | - | - | 100% (257) | hypothetical protein MAB_3269c |
M. abscessus ATCC 19977 | MAB_4736 | - | 2e-07 | 29.41% (119) | hypothetical protein MAB_4736 |
M. abscessus ATCC 19977 | MAB_3089c | - | 5e-06 | 31.08% (74) | hypothetical protein MAB_3089c |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2993c | - | 5e-54 | 45.28% (254) | hypothetical protein Mb2993c |
M. gilvum PYR-GCK | Mflv_4202 | - | 4e-58 | 47.27% (256) | hypothetical protein Mflv_4202 |
M. tuberculosis H37Rv | Rv2969c | - | 5e-54 | 45.28% (254) | hypothetical protein Rv2969c |
M. leprae Br4923 | MLBr_01667 | - | 4e-45 | 39.68% (252) | hypothetical protein MLBr_01667 |
M. marinum M | MMAR_1747 | - | 1e-58 | 46.46% (254) | hypothetical protein MMAR_1747 |
M. avium 104 | MAV_3813 | - | 5e-56 | 47.64% (254) | hypothetical protein MAV_3813 |
M. smegmatis MC2 155 | MSMEG_2410 | - | 3e-65 | 51.95% (256) | putative serine-threonine protein kinase |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1990 | - | 4e-57 | 45.67% (254) | hypothetical protein MUL_1990 |
M. vanbaalenii PYR-1 | Mvan_2163 | - | 2e-58 | 47.45% (255) | hypothetical protein Mvan_2163 |
CLUSTAL 2.0.9 multiple sequence alignment MLBr_01667|M.leprae_Br4923 MRISEPVADNRKRLQRFDLKSVDG-RSGRAVVIAGTVIVAIFAVVVVFAV MAV_3813|M.avium_104 ------MADNPKRPPRFDMKSASGGKSGRLVQIGGTAFVVIFAVALVFYI Mb2993c|M.bovis_AF2122/97 ------MADKSKRPPRFDLKSADG-SFGRLVQIGGTTIVVVFAVVLVFYI Rv2969c|M.tuberculosis_H37Rv ------MADKSKRPPRFDLKSADG-SFGRLVQIGGTTIVVVFAVVLVFYI MMAR_1747|M.marinum_M ------MADKNKRPPRIDLNSPDG-KFGRLIQIGGTAFVVFFAVALVFYI MUL_1990|M.ulcerans_Agy99 ------MADKNKRPTRIDLNSPDG-KFGRLIQIGGTAFVVFFAVALVFYI Mflv_4202|M.gilvum_PYR-GCK ------MASKPKKNARYDLKAADR-KRNLLIQIGLTAVVVIFAVALVLYI Mvan_2163|M.vanbaalenii_PYR-1 ------MATKPKKNARYDLKAADR-KRNLLVQIGLTAVVVIFAVTLVLYI MSMEG_2410|M.smegmatis_MC2_155 -------MAKPKKTAKYDLKAADR-KRNLLVQIGLTAVVVLFAVALVLYI MAB_3269c|M.abscessus_ATCC_199 -------MAKPKQPPSYDLKKAEQ-RRSQLIQIGLTAIVVLFAVGLVGFI : *: *:: . . : *. *..*..*** :* : MLBr_01667|M.leprae_Br4923 MKSQHAKQDGAAPLTGSGDTVRVTS---SKLVTQPGTHDPKVVMSFYEDF MAV_3813|M.avium_104 VTSHHKK----AGPTGAGDTVRVTS---SKLITQPGSSNPKAVVTLYEDF Mb2993c|M.bovis_AF2122/97 VTSRDDKKDG---VAGPGDAVRVTS---SKLVTQPGTSNPKAVVSFYEDF Rv2969c|M.tuberculosis_H37Rv VTSRDDKKDG---VAGPGDAVRVTS---SKLVTQPGTSNPKAVVSFYEDF MMAR_1747|M.marinum_M VTSHQKKGGG---AAGPDDSVRVTS---SKLVTQPGTQDPKVVMTFYEDF MUL_1990|M.ulcerans_Agy99 VTSHQKKGGG---AAGPDDSVRVTS---SKLVTQPGTQDPKVVMTFYEDF Mflv_4202|M.gilvum_PYR-GCK VGSADDKP-----TAGESRGIRVES---TSVIKKEGTDEPKAVVSMYEDF Mvan_2163|M.vanbaalenii_PYR-1 VLSADDKP-----TAGESRAIRVES---TSVIKKDGTDEPKAVLSMYEDF MSMEG_2410|M.smegmatis_MC2_155 VMNGEKNP-----DAGAGKAIRVAS---SDVVTDEGSSDPKVVLGLYEDF MAB_3269c|M.abscessus_ATCC_199 VLSNKKDEGPPAPPAGEVKAIQVVTPGPAKLITKEGTTEPKVVLTLIEDP : . . . :* ::* : :.::.. *: :**.*: : ** MLBr_01667|M.leprae_Br4923 LCPGCGDFERNFGPTVSKLIDIGAIAADYSVVSILDHPRNH-NYPSRAGA MAV_3813|M.avium_104 LCPACGNFERTFGPTVSKLIDLGAIAADYSMVSILDSPRNQ-NYSSRAGA Mb2993c|M.bovis_AF2122/97 LCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQ-HYSSRAAA Rv2969c|M.tuberculosis_H37Rv LCPACGIFERGFGPTVSKLVDIGAVAADYTMVAILDSASNQ-HYSSRAAA MMAR_1747|M.marinum_M LCPACGMFERAFGPTVSRLVDIGAVAADYTMVDILSSPRNQ-NYSARAAA MUL_1990|M.ulcerans_Agy99 LCPACGMFERAFGPTVSRLVDIGAVAADYTMVDILSSPRNQ-NYSARAAA Mflv_4202|M.gilvum_PYR-GCK LCPHCGAFEQQFGPTINKLVDAGAIAADYYMVGILDRPQNQ-NYPARAGG Mvan_2163|M.vanbaalenii_PYR-1 LCPHCGAFEQQFGPTISKLIDSGAIAADYYMVGILDRSQNQ-NYPSRAGG MSMEG_2410|M.smegmatis_MC2_155 LCPACGNFERSFGPTISKLIDSGAIAADYYMVGILDRAGN--GYSSRAGG MAB_3269c|M.abscessus_ATCC_199 ICPACAMFEQEFGPTVKKLIDTGAVRADYDMVGILDVPRLKRDYSSRASA :** *. **: ****:.:*:* **: *** :* **. . *.:**.. MLBr_01667|M.leprae_Br4923 ASLCVADESMDAYRRFRAALYSRSFQPSEL-ASSFPENAKLIEIAREAGV MAV_3813|M.avium_104 AALCVADESLDAFRRFHTALFSTAIQPSET-GKTFPDNARLIELARESGV Mb2993c|M.bovis_AF2122/97 AAYCVADESIEAFRRFHAALFSKDIQPAEL-GKDFPDNARLIELAREAGV Rv2969c|M.tuberculosis_H37Rv AAYCVADESIEAFRRFHAALFSKDIQPAEL-GKDFPDNARLIELAREAGV MMAR_1747|M.marinum_M AAYCVADESIDAFRRFHTAMFSKDIQPSEV-GKTFPDNAKLIEIAREAGA MUL_1990|M.ulcerans_Agy99 TAYCVADESIDAFRRFHTAMFSKDIQPSEV-GKTFPDNAKLIEIAREAGA Mflv_4202|M.gilvum_PYR-GCK AAYCVADESIDAFKRFHAALYA--QQPGET-GSTYPDNARLIEIARQSGA Mvan_2163|M.vanbaalenii_PYR-1 AAYCVADESVDAFRRFHAALYA--QQPSEA-GSAYPDNARLIEVARQSGA MSMEG_2410|M.smegmatis_MC2_155 AGYCVADESTDAFRRFHTALYTPELQPQEN-SGIYPDNARLIELARQAGA MAB_3269c|M.abscessus_ATCC_199 AAYCVADQSQELFLKFHSVLYDPSKQPDEVNSKTWHDDKWLIDQAKAVGA :. ****:* : : :*::.:: ** * . : :: **: *: *. MLBr_01667|M.leprae_Br4923 VGKVPDCINSGKYLAKVTAEAALAKISATPTIKINGDEYDP---LTPEAL MAV_3813|M.avium_104 VGKVPDCINSGKYIAKVTGEAAAAKIRATPTIKINGEDYDP---STPDAL Mb2993c|M.bovis_AF2122/97 VGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEW---STPAAL Rv2969c|M.tuberculosis_H37Rv VGKVPDCINSGKYIEKVDGLAAAVNVHATPTVRVNGTEYEW---STPAAL MMAR_1747|M.marinum_M AGTVPDCINSGKYLDKVNGLAVAANVHATPTVKINGEEYEW---STPEAL MUL_1990|M.ulcerans_Agy99 AGTVPDCINSGKYLDKVNGLAVAANVHATPTVKINGEEYEW---STPKAL Mflv_4202|M.gilvum_PYR-GCK TGGVPECINKGTYVDMVGGLARATEIKSTPTVRINGEEYQY---STPDAL Mvan_2163|M.vanbaalenii_PYR-1 AGAVPECINKGTYVDMVAGLASATGVKSTPSVRINGEDYQY---STPEAL MSMEG_2410|M.smegmatis_MC2_155 AGKVADCINNGRYVEMVKGMAAATGINATPTIRINGEDYSP---TTPDAL MAB_3269c|M.abscessus_ATCC_199 SDAVAKCIKDKKYINMVKELGPKLNIQATPTIRINGKDWEIGKGTTPDDL . *..**:. *: * . : :**::::** ::. ** * MLBr_01667|M.leprae_Br4923 VAKIKAIVGAVPGIDVAVTATTT------ MAV_3813|M.avium_104 VGKIKEIVGDIPGLDGAVAPAAM------ Mb2993c|M.bovis_AF2122/97 VAKIKEIVGDVPGIDSAAATATS------ Rv2969c|M.tuberculosis_H37Rv VAKIKEIVGDVPGIDSAAATATS------ MMAR_1747|M.marinum_M VAKIKEIVGPIPGIDAVAANATS------ MUL_1990|M.ulcerans_Agy99 VAKIKEIVGPIPGIDAVAANATS------ Mflv_4202|M.gilvum_PYR-GCK VAKIKEIVGDVPGLEAAPPAPAPQPAPAS Mvan_2163|M.vanbaalenii_PYR-1 VTKIKEIVGDVPGLEAAPPAPAPQPAPAS MSMEG_2410|M.smegmatis_MC2_155 VAKVKEIVGEVPGL--------------- MAB_3269c|M.abscessus_ATCC_199 IKAVTDITGPVPGLK-------------- : :. *.* :**: