For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MLIGIAAAMLACFGYGTASVLQGYGARQSSTEVGVAADHGPSLKSTVAAALTPAFIAGMVLDLVGFAGSL VSARLIPLFLSQTIMSANLAVTAVLGIAVLGVRLQRRDWLAICAVLLSLCVLAATAGPRGEDSAPPAIHW GVLTVSISVLLTGIALIRLLGTRAAIPAGLLAGILYGGMAVAVRVVGGVDPLSLTVLLADPAAYGVVIAG VGGFYLFTVALQIGSVNGAAAALVVGETVVPGVIGVVLLGDSARPGMGWLVAVAFLGAVVSAVAVAVFGA AEHSRPVAPDPAR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_2553 | - | - | 100% (293) | putative integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2748c | - | 1e-08 | 23.18% (289) | hypothetical protein Mb2748c |
M. gilvum PYR-GCK | Mflv_3964 | - | 2e-14 | 28.99% (238) | hypothetical protein Mflv_3964 |
M. tuberculosis H37Rv | Rv2729c | - | 6e-09 | 22.97% (283) | hypothetical protein Rv2729c |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_1984 | - | 2e-07 | 24.54% (216) | hypothetical protein MMAR_1984 |
M. avium 104 | MAV_2125 | - | 1e-12 | 27.27% (253) | hypothetical protein MAV_2125 |
M. smegmatis MC2 155 | MSMEG_2732 | - | 8e-15 | 25.41% (244) | hypothetical protein MSMEG_2732 |
M. thermoresistible (build 8) | TH_3271 | - | 1e-10 | 27.85% (237) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | MUL_3372 | - | 1e-07 | 24.54% (216) | hypothetical protein MUL_3372 |
M. vanbaalenii PYR-1 | Mvan_5745 | - | 3e-12 | 24.64% (276) | hypothetical protein Mvan_5745 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_3964|M.gilvum_PYR-GCK ------MGEADIAVVLALAAALFMAVG-DVIHQRSAHEITDEP-VGHLEL MSMEG_2732|M.smegmatis_MC2_155 ------MNRADIAALLALGAALCIAIG-DVIHQRSAHDVTDDS-VSHLGL MAV_2125|M.avium_104 ------MGRTDIATVLAVAAALMVGAG-DVAQQQSAQQVTDQP-VGTVAL Mb2748c|M.bovis_AF2122/97 ------MASVEFATILALGAALLAGIG-YVTLQRSARQVTAEEYVGHLTL Rv2729c|M.tuberculosis_H37Rv ------MASVEFATILALGAALLAGIG-YVTLQRSARQVTAEEYVGHFTL MMAR_1984|M.marinum_M ------MTTTEIAAVLALGAAFASALG-NVTRQRSAQEITDEQ-VGHLEL MUL_3372|M.ulcerans_Agy99 ------MTTTEIAAVLALGAAFASALG-NVTRQRSAQEITDEQ-VGHLEL TH_3271|M.thermoresistible__bu ------VLGQGLAVLLAVCAAVFAAVG-IVVRQRATMDVPPEKGVSTVMI Mvan_5745|M.vanbaalenii_PYR-1 MCCPCRVIGHGVTVLLAFLAAVFLAVG-IVVRQRATLDVPAEHGVSPVMI MAB_2553|M.abscessus_ATCC_1997 -----MLIGIAAAMLACFGYGTASVLQGYGARQSSTEVGVAADHGPSLKS : : : .. . * :: . Mflv_3964|M.gilvum_PYR-GCK FLKLLRDGRWWLGSGVAAMGFACQAAALGLGSVLLVQALLVTSLLFALPL MSMEG_2732|M.smegmatis_MC2_155 FKRLLRDGRWWLGSGVAAAGFALQAAALGLGSVLLVQALLVTSLLFALPI MAV_2125|M.avium_104 FRRLLRDRRWWTGSLVAAGGFGFQAAALGFGSVVLVQALLVTSLLFALLI Mb2748c|M.bovis_AF2122/97 FHLSLRHALWWLGSLAAVASFTLQAIALTMGSVVLVQSLQATALLFALLI Rv2729c|M.tuberculosis_H37Rv FHLSLRHALWWLGSLAAVASFTLQAIALTMGSVVLVQSLQATALLFALLI MMAR_1984|M.marinum_M FWLSLRDSRWWLGALGAIANYLLQAAALTLGSVVLVSALQVTALLFALPI MUL_3372|M.ulcerans_Agy99 FWLSLRDSRWWLGALGAIANYLLQAAALTLGSVVLVSALQVTALLFALPI TH_3271|M.thermoresistible__bu ATLVRR-RLWWIGTGAAVAGYALQAAALAFGSLILVQPILVSALLFALPL Mvan_5745|M.vanbaalenii_PYR-1 QTLVRR-PLWWAGTASAVAGFVFQALALANGSLLLVQPILVSALLFALPL MAB_2553|M.abscessus_ATCC_1997 TVAAALTPAFIAGMVLDLVGFAGSLVSARLIPLFLSQTIMSANLAVTAVL : * .: . : .:.* ..: : * .: : Mflv_3964|M.gilvum_PYR-GCK SARLSHRRVTRWEWIWAVLLAGAVAVIVTVGNPTEGATRASLQTWIEVAA MSMEG_2732|M.smegmatis_MC2_155 NARLTRRRVTRWEWMWAALLAGAVAVIVTVGNPTAGHARAPWEAWTLVLA MAV_2125|M.avium_104 SARVNRRRITGRQAVWALLLAAAVAVVVTVGDPQEGTPRGSLQTWTIVAL Mb2748c|M.bovis_AF2122/97 DARLTHHRCTPREWMWAVLLAGAVAVIVMSGNPAAGTTRAPFSTWAVVAV Rv2729c|M.tuberculosis_H37Rv DARLTHHRCTPREWMWAVLLAGAVAVIVMSGNPAAGTTRAPFSTWAVVAV MMAR_1984|M.marinum_M YARVTRRRVTRWEWTWAVLLAVSLAVVVIVGDPDVGVSRGSLATWMVVAS MUL_3372|M.ulcerans_Agy99 YARVTRRRVTRWEWTWAVLLAVSLAVVVIVGDPDVGVSRGSLATWMVVAS TH_3271|M.thermoresistible__bu SARLGARRVSRGEWAWAAVLTVALAAFVLIAKPKPGDYQASIPGTVVVTV Mvan_5745|M.vanbaalenii_PYR-1 SARLAHRRVTRAEWAWAVLLTLALAVFVVLAKASPGDYEASLSTSAVVAV MAB_2553|M.abscessus_ATCC_1997 GIAVLGVRLQRRDWLAICAVLLSLCVLAATAGPRGEDSAPPAIHWGVLTV : * : : ::.... . . . : Mflv_3964|M.gilvum_PYR-GCK VLGPVLVLCLVGARMSSGAMSAVLTGVVSGALWGVFAVLTKTVVHRLDVT MSMEG_2732|M.smegmatis_MC2_155 VLGPAVAVCLVGARIFTGARSAVLLALVSGALWGVFAVLTKGVVNHLLVH MAV_2125|M.avium_104 VMGPALIGCVLGARLYPGPVAALLLGLMSGSLWGLFAVLTKGVVDQLDR- Mb2748c|M.bovis_AF2122/97 VVVPAVVLCVVGARIASGSLSAVLLAVASSATLAVFTVLTKGVVTELGE- Rv2729c|M.tuberculosis_H37Rv VVVPAVVLCVVGARIASGSLSAVLLAVASSATLAVFTVLTKGVVTELGE- MMAR_1984|M.marinum_M VLGPVMVFCVLGARIWSGSVAAVLLAVVSGCSLALFAVLTKAVVEVVGG- MUL_3372|M.ulcerans_Agy99 VLGPVMVFCVLGARIWSGSVAAVLLAVVSGCSLALFAVLTKAVVEVVGG- TH_3271|M.thermoresistible__bu ACVAGVTVCVVLAVRSLGWRRALLLATAVGVLFGVVAVLTKVWLHKLFT- Mvan_5745|M.vanbaalenii_PYR-1 VCTVAVLACVIVATRIAGWIRAVLLAVAVGVLFGVVAVLTKLVMHVLTN- MAB_2553|M.abscessus_ATCC_1997 SIS--VLLTGIALIRLLGTRAAIPAGLLAGILYGGMAVAVRVVGGVDP-- : : * *: . . . .:* .: Mflv_3964|M.gilvum_PYR-GCK SLAGVVELLSTPELYAWAVVGILGTSTQQAAFRAGSLTASLPTMTVTEPL MSMEG_2732|M.smegmatis_MC2_155 SWGGVFTLLRVPELYVWILVAIAGTVVQQSSFRAGALTASLPTMTVTEPV MAV_2125|M.avium_104 ---GIPALLRTPELYVWVLLAIAATAWEQSAFRAGPLTASLPAVTVAEPI Mb2748c|M.bovis_AF2122/97 ---GFATLIRTPELYAWILVLPIGLMLQQSSLRVGALTASLPTITVARPV Rv2729c|M.tuberculosis_H37Rv ---GFATLIRTPALYAWILVLPIGLMLQQSSLRVGALTASLPTITVARPV MMAR_1984|M.marinum_M ---GAGALFRAPEFYVWIAAALGGMIFQQSSFRAGTLTASLPTVVVAKPL MUL_3372|M.ulcerans_Agy99 ---GAGALFRAPEFYVWIAAALGGMIFQQSSFRAGTLTASLPTVVVAKPL TH_3271|M.thermoresistible__bu --GGVAVGVTSPLLYLLILLGVLATLLQQSAFHAGSLQASVPTMLVLEPV Mvan_5745|M.vanbaalenii_PYR-1 --EGFVAVLTTPVLYLLALLGVVATLLQQSAFHAGSLQTSVPTMLVLEPM MAB_2553|M.abscessus_ATCC_1997 --LSLTVLLADPAAYGVVIAGVGGFYLFTVALQIGSVNGAAAALVVGETV . . * * . ::: *.: : .:: * ..: Mflv_3964|M.gilvum_PYR-GCK VGCALGVVVLGETMRPGETGWVLLIAAAVTVVVATAALAR----GEATDL MSMEG_2732|M.smegmatis_MC2_155 VASVLGIVVLGETLRPGDAGWVTLVAAIAVMVAATVALAR----GEAAE- MAV_2125|M.avium_104 IGSVLGVTVLGETLRTNGIGLLALGISVAVMAAATVALAR----SQAASA Mb2748c|M.bovis_AF2122/97 IASVLGITVLDEVLHTGRVALVALVAVVVVVVVATVALAR---DEVAMMT Rv2729c|M.tuberculosis_H37Rv IASVLGITVLDEVLHTGRVALVALVAAVVVVVVATVALAR---DEVAMMT MMAR_1984|M.marinum_M MGAVLGMVVLGETLDTTGPGLVVVAFGVVLVLVATIALARGEAEKVAEEA MUL_3372|M.ulcerans_Agy99 MGAVLGMVVLGETLDTTGPGLVVVAFGVVLVLVATIALARGEAEKVAEEA TH_3271|M.thermoresistible__bu VAVALGAAVLGEHLDINGWEPVPLALAGAAMFAATVALGRN--EGAYEER Mvan_5745|M.vanbaalenii_PYR-1 IAVILGAVVLGEHLNAGRWDAVALVVSTVAMVAGTIALGRD--EGAYEEQ MAB_2553|M.abscessus_ATCC_1997 VPGVIGVVLLGDSARPGMGWLVAVAFLGAVVSAVAVAVFG-----AAEHS : :* .:*.: : : . : . : *: Mflv_3964|M.gilvum_PYR-GCK QPATV-------------------------------- MSMEG_2732|M.smegmatis_MC2_155 EPATVPAH----------------------------- MAV_2125|M.avium_104 PTADEIPPFSTEKT----------------------- Mb2748c|M.bovis_AF2122/97 VSAGELGAAG-QLAVR--------------------- Rv2729c|M.tuberculosis_H37Rv VSAGELGAAG-QLAVR--------------------- MMAR_1984|M.marinum_M VESGHIPATMPHRAVTMHFGPADDDVQTDRLRRAPAG MUL_3372|M.ulcerans_Agy99 VESGHIPATMPHRAVTMHFGPADDDVQTDRLRRAPAG TH_3271|M.thermoresistible__bu LEVAALAQQSRSQQVRT-------------------- Mvan_5745|M.vanbaalenii_PYR-1 LE-ADLAQKAQAASGNG-------------------- MAB_2553|M.abscessus_ATCC_1997 RPVAPDPAR----------------------------