For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ATTLVLGGIRSGKSRFAESLLPAEGPARYLATGSPDTGDPAWTERIAAHRSRRPSQWTTAETTDIATELR TRAPLPTLVDDLGGWLTAAMDAHGAWDVGAGAVSADIGALVEAVADYPVDLVIVSPEVGLTVVPATAAGR LFADALGALNQAVAARADRVLLVVAGQPLTIKGGRS*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1954c | - | - | 100% (177) | putative cobinamide kinase/cobinamide phosphate guanylyltransferase CobU |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0260c | cobU | 9e-34 | 46.89% (177) | putative bifunctional cobalamin biosynthesis protein cobU: |
M. gilvum PYR-GCK | Mflv_0355 | - | 8e-35 | 46.51% (172) | cobalbumin biosynthesis enzyme |
M. tuberculosis H37Rv | Rv0254c | cobU | 9e-34 | 46.89% (177) | bifunctional cobinamide kinase/cobinamide phosphate |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_3251 | cobU | 5e-49 | 56.52% (184) | bifunctional cobalamin biosynthesis protein CobU |
M. avium 104 | MAV_2284 | cobU | 9e-52 | 59.77% (174) | cobinamide kinase / cobinamide phosphate guanyltransferase |
M. smegmatis MC2 155 | MSMEG_4274 | cobU | 3e-49 | 58.29% (175) | cobinamide kinase / cobinamide phosphate guanyltransferase |
M. thermoresistible (build 8) | TH_1435 | cobU | 5e-55 | 61.05% (172) | Cobinamide kinase / cobinamide phosphate guanyltransferase |
M. ulcerans Agy99 | MUL_3564 | cobU | 1e-49 | 57.07% (184) | bifunctional cobalamin biosynthesis protein CobU |
M. vanbaalenii PYR-1 | Mvan_0379 | - | 2e-35 | 49.13% (173) | cobalbumin biosynthesis enzyme |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4274|M.smegmatis_MC2_155 ---MLVLGGIRSGKSQWAESVAQQLAGEGDRAPVRYVATGPVPEG-DAD- TH_1435|M.thermoresistible__bu -VRILVLGGIRSGKSQWAETALADAVGD---APARYLATGRVPDA-DTD- MMAR_3251|M.marinum_M -MRTLVLGGIRSGKSRWAEETIADSLTPE--QPVRYLASGPATDS-DSAA MUL_3564|M.ulcerans_Agy99 -MRTLVLGGIRSGKSRWAEETIADSLTPE--QPVRYLASGPATDS-DSAA MAV_2284|M.avium_104 -MRTLVLGGIRSGKSQWAEEAVADGLPAG--RRVRYLAPGPPGVH-DAA- MAB_1954c|M.abscessus_ATCC_199 MATTLVLGGIRSGKSRFAESLLP---AEG---PARYLATGSPDTG-DPA- Mb0260c|M.bovis_AF2122/97 -MRILVTGGVRSGKSTHAEALLGDA------ADVVYVAPGRPAAGSDPD- Rv0254c|M.tuberculosis_H37Rv -MRILVTGGVRSGKSTHAEALLGDA------ADVVYVAPGRPAAGSDPD- Mflv_0355|M.gilvum_PYR-GCK -MRILVTGGVRSGKSRHAEELLAGA------GHVTYVAPGRAADGTDPD- Mvan_0379|M.vanbaalenii_PYR-1 -MMILVTGGVRSGKSRHAEALLSDA------RQVTYLAPGRPADGSDPD- ** **:***** ** . *:*.* *. MSMEG_4274|M.smegmatis_MC2_155 ---WATRVEAHQVRRPAHWQTVETTDLTATLTAAPHVATLVDDIGGWLTA TH_1435|M.thermoresistible__bu ---WAARVSAHRRRRPAHWSTCETTDVATQLRTYPDLPTMIDDVGGWLTA MMAR_3251|M.marinum_M SQDWDQRVARHRDRRPGHWSTVETDDITTQLRQVPDTPTLVDDLGTWLTS MUL_3564|M.ulcerans_Agy99 SQDWDQRVARHRDRRPGHWSTVETDDIATQLRQVPDTPTLVDDLGTWLTS MAV_2284|M.avium_104 ---WAHRVAEHRDRRPAHWSTIETDDIATELRRCPQVPTLVDDLGGWLTG MAB_1954c|M.abscessus_ATCC_199 ---WTERIAAHRSRRPSQWTTAETTDIATELRTRAPLPTLVDDLGGWLTA Mb0260c|M.bovis_AF2122/97 ---WDARVALHRARRPPTWLTVETADVATALSEARS-PVLVDCLGTWLTA Rv0254c|M.tuberculosis_H37Rv ---WDARVALHRARRPPTWLTVETADVATALSEARS-PVLVDCLGTWLTA Mflv_0355|M.gilvum_PYR-GCK ---WDARVSRHRARRPAHWRTVETADVAVAVRDAQG-TVLVDCLGTWLTA Mvan_0379|M.vanbaalenii_PYR-1 ---WDARVAGHRTRRPAHWQTVETADVAAAVRDADG-AVLVDCLGTWLTA * *: *: *** * * ** *::. : ..::* :* ***. MSMEG_4274|M.smegmatis_MC2_155 TMDRRDAWAGHP------VTGDVTALVDAVAAFRAPLVMVSPEVGLTVVP TH_1435|M.thermoresistible__bu TMDRHDAWSGGS------VTADTDELVAAVADFRSTLLVVSPEVGLSVVP MMAR_3251|M.marinum_M AMDSHRAWEGGSP--PAALQDTIDDMLAAVGEFGSTLVLVSPEVGLTVVP MUL_3564|M.ulcerans_Agy99 AMDSHRAWEGGSP--PAALQDTIDDMLAAVGEFGSTLVLVSPEVGLTVVP MAV_2284|M.avium_104 MLDRHDGWQGGS------VTAPVDDLLAAVAEFAAALVLVSPEVGLTVVP MAB_1954c|M.abscessus_ATCC_199 AMDAHGAWDVGAG----AVSADIGALVEAVADYPVDLVIVSPEVGLTVVP Mb0260c|M.bovis_AF2122/97 IMDGEALWSAATADVYAVLEARLDGLCAALTG-LPTAIVVTNEVGLGVVP Rv0254c|M.tuberculosis_H37Rv IMDGEALWSAATADVYAVLEARLDGLCAALTG-LPTAIVVTNEVGLGVVP Mflv_0355|M.gilvum_PYR-GCK VLDDNGLWDKGSREATDEVEIRVTALCDALAG-AAGAVVVTNEVGLGVVP Mvan_0379|M.vanbaalenii_PYR-1 VLDRNNLWDKGSREVHDAVDARLTALCAALTARREAVVVVTNEVGLGVVP :* . * . : : *: ::*: **** *** MSMEG_4274|M.smegmatis_MC2_155 ATAAGRRFADELGTVNQRLAAVCDRVVLVVAGQPVTVKEPT- TH_1435|M.thermoresistible__bu TTAVGRRFADALGTLNQRLARVCDRVVLVVAGQPVTVKEPV- MMAR_3251|M.marinum_M ATASGRRFADELGTLNQRMAALCDRVVLVVAGQAVPIKPSRA MUL_3564|M.ulcerans_Agy99 ATASGRRFADELGTLNQRMAALCDRVVLVVAGQAVPIKPSRA MAV_2284|M.avium_104 ATASARRFADELGSLNQRLARLCDRVVLVVAGQPVPIKTPGV MAB_1954c|M.abscessus_ATCC_199 ATAAGRLFADALGALNQAVAARADRVLLVVAGQPLTIKGGRS Mb0260c|M.bovis_AF2122/97 SHSSGVLFRDLLGTINRRVAAVCDEVHLVIAGRVLKL----- Rv0254c|M.tuberculosis_H37Rv SHSSGVLFRDLLGTINRRVAAVCDEVHLVIAGRVLKL----- Mflv_0355|M.gilvum_PYR-GCK SHRSGVLFRDLLGTVNQRVAQVCDEVHLVIAGRVLTL----- Mvan_0379|M.vanbaalenii_PYR-1 SHRSGVLFRDLLGTANQRVAAVCDEVHLVIAGRVLKI----- : . * * **: *: :* .*.* **:**: : :