For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AARRQWAGTTPEERRATRRRALLDAGIAALGAIDGPALTIRTVCRSSGVSERNFYEEFGDRDDFVRAVYQ DVLESVMRVVTEFAAEGDDLETRAVETFIGATVDNPVYGRVLMVAPFTEPTLGSAGFAGSLAFASLAEKA LIDIDDPGRRRFLSVSLVGAASGAIIDYLRGDLAISRDELIDYISRMGRQVSAIFN*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1473c | - | - | 100% (197) | hypothetical protein MAB_1473c |
M. abscessus ATCC 19977 | MAB_0756c | - | 2e-32 | 40.76% (184) | hypothetical protein MAB_0756c |
M. abscessus ATCC 19977 | MAB_2494c | - | 3e-21 | 33.85% (192) | putative transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0848c | - | 9e-36 | 41.45% (193) | hypothetical protein Mb0848c |
M. gilvum PYR-GCK | Mflv_1669 | - | 3e-32 | 37.84% (185) | TetR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0825c | - | 9e-36 | 41.45% (193) | hypothetical protein Rv0825c |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_4855 | - | 1e-35 | 43.09% (181) | hypothetical protein MMAR_4855 |
M. avium 104 | MAV_0773 | - | 4e-33 | 42.61% (176) | hypothetical protein MAV_0773 |
M. smegmatis MC2 155 | MSMEG_5768 | - | 2e-36 | 43.65% (181) | hypothetical protein MSMEG_5768 |
M. thermoresistible (build 8) | TH_1575 | - | 2e-33 | 42.69% (171) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_0446 | - | 7e-36 | 43.09% (181) | hypothetical protein MUL_0446 |
M. vanbaalenii PYR-1 | Mvan_5084 | - | 1e-32 | 37.30% (185) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_5768|M.smegmatis_MC2_155 MPSGQRRGRWSGVPLRERTALRRDELIAAGVKLLGAADGPALTVRAVCRE TH_1575|M.thermoresistible__bu ------------VPLSDRQTLRREELIAAGVKLLGHREGPALTVRAVCRE Mflv_1669|M.gilvum_PYR-GCK MPSGQRRGRWSGVPLQDRQALRRDELITAGIGLLGSSGGPNLTVRAVCKA Mvan_5084|M.vanbaalenii_PYR-1 MPSGQRRGRWSGVPLQDRQALRRDELITAGISLLGSPGGPHLTVRAVCKA Mb0848c|M.bovis_AF2122/97 MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRH Rv0825c|M.tuberculosis_H37Rv MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRH MAV_0773|M.avium_104 ------------MPLESRLALRRDNLINAGVQLLGGSGGPALTVRAVCRK MMAR_4855|M.marinum_M MQAGQRRGRWTGVPLEDRHAVRRDTLIAAGVQLLGEEAGPALTVRAVCRQ MUL_0446|M.ulcerans_Agy99 MQAGQRRGRWTGVPLEDRHAVRRDTLIAAGVQLLGEEAGPALTVRAVCRQ MAB_1473c|M.abscessus_ATCC_199 ---MAARRQWAGTTPEERRATRRRALLDAGIAALGAIDGPALTIRTVCRS . .* : ** *: **: ** ** **:*:**: MSMEG_5768|M.smegmatis_MC2_155 AGLTERYFYECFNDRDGFVRAVYDDVCATAMSALTAADTPRK-----AVE TH_1575|M.thermoresistible__bu AGLTERYFYESFADRDEFVRAVYDDVCARAMSTLMTADTPRD-----AVE Mflv_1669|M.gilvum_PYR-GCK AGLTERYFYESFTDRDEYVAAVYDDVCTAAMATLRESESMRD-----AVE Mvan_5084|M.vanbaalenii_PYR-1 AGLTERYFYESFTDRDEYVAAVYDNVCTAAMSTLMKSDSMRD-----AVE Mb0848c|M.bovis_AF2122/97 AGLTERYFYESFADREHFVRAVYDDVCTRAMATLTSAQTPRE-----AVE Rv0825c|M.tuberculosis_H37Rv AGLTERYFYESFADREHFVRAVYDDVCTRAMATLTSAQTPRE-----AVE MAV_0773|M.avium_104 AALTERYFYESFTDRDEFVRAVYDDVCTRAMNTLTSATTPRE-----AVE MMAR_4855|M.marinum_M AALTERYFYESFSDRDHFVRAVYDDVCTRAMATLMSANTPRD-----AVE MUL_0446|M.ulcerans_Agy99 AALTERYFYESFSDRDHFVRAVYDDVCTRAMATLMSANTPRD-----AVE MAB_1473c|M.abscessus_ATCC_199 SGVSERNFYEEFGDRDDFVRAVYQDVLESVMRVVTEFAAEGDDLETRAVE :.::** *** * **: :* ***::* .* .: : . *** MSMEG_5768|M.smegmatis_MC2_155 QFVSLMVDDPTRGRVLLLAPESEPVLTRSGAEWMPNFIDLLQRKLTRIAD TH_1575|M.thermoresistible__bu RFVALMVDDPVRGRVLLLAPEVEPVLTRSGAKWMPNFIDLLQRKLTRITD Mflv_1669|M.gilvum_PYR-GCK RFVALMIDDPARGRVLLLAPEAEPVLARSGARWMPNFIELLQHNLTRITD Mvan_5084|M.vanbaalenii_PYR-1 RFVALMIDDPARGRVLLLAPEVEPVLARSGARWMPNFIDLLQRNLTQISD Mb0848c|M.bovis_AF2122/97 QFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIELLQRKLSRIVD Rv0825c|M.tuberculosis_H37Rv QFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIELLQRKLSRIVD MAV_0773|M.avium_104 RFVELMVDDPVRGRVLLLAPAVEPVLTRSGAEWMPNFIDLLQRKLSRIGD MMAR_4855|M.marinum_M RFVALMVDDPVRGRVLLLAPAVEPVLTRSGADWMPNFIDLLQRKLSQIAD MUL_0446|M.ulcerans_Agy99 RFVALMVDDPVRGRVLLLAPAVEPVLTRSGADWMPNFIDLLQRKLSQIAD MAB_1473c|M.abscessus_ATCC_199 TFIGATVDNPVYGRVLMVAPFTEPTLGSAGFAGSLAFASLAEKALIDIDD *: :*:*. ****::** **.* :* * .* :: * * * MSMEG_5768|M.smegmatis_MC2_155 PVRQAMVATSLIGALTALFTAYLNDRLPATREQFIDFCVDMLLGRVGSF- TH_1575|M.thermoresistible__bu PALQAMVATGLIGALTALFTAYLDGRLAATREQFIDYCVGILLNPVASY- Mflv_1669|M.gilvum_PYR-GCK TTTQAMVATGLIGALTALFTAYLDGRLEATREQFIDHCAELLLSRAVT-- Mvan_5084|M.vanbaalenii_PYR-1 PTTQAMVATGLIGALTALFTAYLDGRLGATRERFIDHCAELLLSRAVT-- Mb0848c|M.bovis_AF2122/97 PVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATYA Rv0825c|M.tuberculosis_H37Rv PVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATYA MAV_0773|M.avium_104 AVLQKMIATSLVGGLSSLFTAYLHGQLGATRKQFIDYCTNMLYITAAPYV MMAR_4855|M.marinum_M PVLQKLVATSLIGALTGLFTAYLNGQLGATRQQFIDYCVDLLLGTAAAYA MUL_0446|M.ulcerans_Agy99 PVLQKLVATSLIGALTGLFTAYLNGQLGATRQQFIDYCVDLLLGTAAAYA MAB_1473c|M.abscessus_ATCC_199 PGRRRFLSVSLVGAASGAIIDYLRGDLAISRDELIDYISRMGRQVSAIFN . : :::..*:*. :. : ** . * :*..:**. : MSMEG_5768|M.smegmatis_MC2_155 ------------------ TH_1575|M.thermoresistible__bu ------------------ Mflv_1669|M.gilvum_PYR-GCK ------------------ Mvan_5084|M.vanbaalenii_PYR-1 ------------------ Mb0848c|M.bovis_AF2122/97 PHRERGESEHSIPAGPHN Rv0825c|M.tuberculosis_H37Rv PHRERGESEHSIPAGPHN MAV_0773|M.avium_104 SAGELGKSQ--------- MMAR_4855|M.marinum_M PHRDRGEAERPVAARQHD MUL_0446|M.ulcerans_Agy99 PHRDRGEAEHPVAARQHD MAB_1473c|M.abscessus_ATCC_199 ------------------