For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SSAPFADELLATVQASPAAVGAHDKDTWVGLFATYGQVNDPVGSRPHIGESAIGKFYDTFIAPNTIVFDV ENDVVAGMSVLRDLTIHTTMSTGVTMHIPMHLRYDVVEDGPASSLKIDRLFAYWELRAMISQLLGSGGDG LLASAKLGPQLLKNQGLNGVLGFMRGLKGVHAAGKQRVQELTAALAARDIPTVTTVLAPEAALSLDGVSE ASLAEFASAASSLTVDKLLAAGPSVSATVHLGNRRGIGLFEFSDNSAAPGTLASVRLYF*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_1289c | - | - | 100% (270) | hypothetical protein MAB_1289c |
M. abscessus ATCC 19977 | MAB_4170 | - | 3e-08 | 37.50% (120) | hypothetical protein MAB_4170 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2068c | - | 8e-41 | 38.52% (244) | hypothetical protein Mb2068c |
M. gilvum PYR-GCK | Mflv_3431 | - | 8e-41 | 36.88% (263) | nuclear transport factor 2 |
M. tuberculosis H37Rv | Rv2042c | - | 8e-41 | 38.52% (244) | hypothetical protein Rv2042c |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | MMAR_3015 | - | 9e-42 | 38.93% (244) | hypothetical protein MMAR_3015 |
M. avium 104 | MAV_2473 | - | 5e-46 | 42.92% (240) | steroid delta-isomerase |
M. smegmatis MC2 155 | MSMEG_3684 | - | 3e-37 | 36.11% (252) | steroid delta-isomerase |
M. thermoresistible (build 8) | TH_3530 | - | 4e-40 | 37.92% (240) | PUTATIVE putative nuclear transport factor 2 |
M. ulcerans Agy99 | MUL_0468 | - | 3e-06 | 27.13% (129) | hypothetical protein MUL_0468 |
M. vanbaalenii PYR-1 | Mvan_3185 | - | 1e-42 | 37.50% (264) | nuclear transport factor 2 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_3684|M.smegmatis_MC2_155 --MGPTRAELLTAVERSPQAAAVHDRDAWVGLFADGGRIEDPVGSRPH-- TH_3530|M.thermoresistible__bu --MTFTRTEMIAVVERSPHTIEARDRHGWVDLFTPDARIEDPVGSRPH-- Mflv_3431|M.gilvum_PYR-GCK --MPFTRADVAAAAQRSLAAAAAHDRETWIGLFTADGRVEDPVGSAPH-- Mvan_3185|M.vanbaalenii_PYR-1 --MPFTRADVLSAAQQSLAAAGAHDRGGWIGLFTADARVEDPVGSAPH-- Mb2068c|M.bovis_AF2122/97 -MAPPNRDELLAAVERSPQAAAAHDRAGWVGLFTGDARVEDPVGSQPQ-- Rv2042c|M.tuberculosis_H37Rv -MAPPNRDELLAAVERSPQAAAAHDRAGWVGLFTGDARVEDPVGSQPQ-- MMAR_3015|M.marinum_M -MALPKRDDLLAAVERSPRAAAAHDRAGWVSLFTSDGRVEDPVGSMPH-- MAV_2473|M.avium_104 MVAPLDRQQLLAAVERSPQAAAEHDRAAWVALFTPDGRIEDPVGSRPH-- MAB_1289c|M.abscessus_ATCC_199 MSSAPFADELLATVQASPAAVGAHDKDTWVGLFATYGQVNDPVGSRPH-- MUL_0468|M.ulcerans_Agy99 -MTQTAQSPALAASQASWRCVQAHDRQGWLALMADDIVIEDPIGKSVTNP :. : * :*: *: *:: ::**:*. MSMEG_3684|M.smegmatis_MC2_155 -----RGPAEIAQFYDTFIGPRDIAFHR-DVDIVAG-STVIRDLELEVAM TH_3530|M.thermoresistible__bu -----IGRDRIERFYDTFIGPRRLRLHP-ETDLVVG-TTVLRDLRLEVTM Mflv_3431|M.gilvum_PYR-GCK -----RGRAAIGRFYDTFIAPRTITAHVQGEDIVVD-TTVLRDVELEIEM Mvan_3185|M.vanbaalenii_PYR-1 -----RGHVALGHFYDTFIGPRVITYRP-DTDIVVG-TTVIRDLELDIQM Mb2068c|M.bovis_AF2122/97 -----VGHEAIGRFYDTFIGPRDITFHR-DLDIVSG-TVVLRDLELEVAM Rv2042c|M.tuberculosis_H37Rv -----VGHEAIGRFYDTFIGPRDITFHR-DLDIVSG-TVVLRDLELEVAM MMAR_3015|M.marinum_M -----VGHEQIGRFFDTFIGPRDIKFHR-DLDIVCG-TVVLRDVELEVAM MAV_2473|M.avium_104 -----LGRTQIGRFYDTFIAPRDIRFHR-DLDVVFG-TTVLRDLELEVAM MAB_1289c|M.abscessus_ATCC_199 -----IGESAIGKFYDTFIAPNTIVFDV-ENDVVAG-MSVLRDLTIHTTM MUL_0468|M.ulcerans_Agy99 DGTGVRGKDGVANFYDTNIAANQLSITCEETFPSSSPNEIAHILVLRSRF * : .*:** *... : . : : : : : MSMEG_3684|M.smegmatis_MC2_155 GAADPGTGNAAVTMRIPAYLRYALQDTETDTETGAGPRIAELQAYWELPA TH_3530|M.thermoresistible__bu AAGLP--------LDIPAFLRYDLA------ADGTELRIAALQAFWELPT Mflv_3431|M.gilvum_PYR-GCK SAAVS--------LRVPTFIRYDLR------ADGDDLQVCALSAYWELPA Mvan_3185|M.vanbaalenii_PYR-1 APTLT--------MHVPTYIRYDLR------ADGDELKIAALSAYWELPA Mb2068c|M.bovis_AF2122/97 DSAVT--------VFIPAFLRYDLR------PVTGEWQIAALRAYWELPA Rv2042c|M.tuberculosis_H37Rv DSAVT--------VFIPAFLRYDLR------PVTGEWQIAALRAYWELPA MMAR_3015|M.marinum_M AAGVT--------MFVPAFLRYDLR------KASDEWKIAVLRAYWDLPA MAV_2473|M.avium_104 GPTVT--------MYIPAFLRYDLR------ETNGEWLIGALRAYWELPA MAB_1289c|M.abscessus_ATCC_199 STGVT--------MHIPMHLRYDVVED----GPASSLKIDRLFAYWELRA MUL_0468|M.ulcerans_Agy99 DGGFT--------SEVRGVFTYRVN---------DEGLMTNMRGYWNLEM . : : * : : : .:*:* MSMEG_3684|M.smegmatis_MC2_155 MVFQFVRNGTRAVPVGLQLAGDLLRNQGPVGAVGFAAGFRGVGARPRSHG TH_3530|M.thermoresistible__bu MIGSFLRSGPRAVPAGLGLSRALLVNQGLSGAAGFLAGLRTLG----SHG Mflv_3431|M.gilvum_PYR-GCK MIGQFARAGLGVVPVGVSLGRSMFANQGIGGSVGFLRGFRGSG----SAG Mvan_3185|M.vanbaalenii_PYR-1 MIGQFARGGLGAVPAGIALGRSMVANQGLSGALGFLGGFRGLG----AGG Mb2068c|M.bovis_AF2122/97 MMLQFLRTGSGATRPALQLSRALLGNQGLGGTAGFLTGFRRAG----RRH Rv2042c|M.tuberculosis_H37Rv MMLQFLRTGSGATRPALQLSRALLGNQGLGGTAGFLTGFRRAG----RRH MMAR_3015|M.marinum_M MMLQFLRGGAQVAKPALMLSRGLLGNQGLRGTAGFMTGFRRSG----ARH MAV_2473|M.avium_104 MMVQFLRSGPGAARPAVDLCRGLLRNQGWRGSAGFMAGFRRVG----APH MAB_1289c|M.abscessus_ATCC_199 MISQLLGSGGDGLLASAKLGPQLLKNQGLNGVLGFMRGLKGVH----AAG MUL_0468|M.ulcerans_Agy99 MKFGNQE------------------------------------------- * MSMEG_3684|M.smegmatis_MC2_155 RRRFIRLLDDLCAGDEVSVRRTLRRDARVQSGESAPLGASKLTAMTAGGS TH_3530|M.thermoresistible__bu RKGFGGFLADAATGDEVAVRRRLARGARITLGDDEPMTATALLTRLAGTR Mflv_3431|M.gilvum_PYR-GCK KRVFARFLDDACGGDEVGMRR-LLSDAPVTLGDGDPLTSSDVVGYLSGGT Mvan_3185|M.vanbaalenii_PYR-1 GTLFARFLDDACGGDEVGIRR-LVSDAPVTAGDSEPMTSSDLVKQLAGGA Mb2068c|M.bovis_AF2122/97 KKLVETFLNAASRADKSAAYHALSRTATMTLGEDELLDIVELFEQLRGAS Rv2042c|M.tuberculosis_H37Rv KKLVETFLNAASRADKSAAYHALSRTATMTLGEDELLDIVELFEQLRGAS MMAR_3015|M.marinum_M QALVSTFLDGVVRGDSQAATRTLTDTATITLGDDDVLELAELIEQLRRAT MAV_2473|M.avium_104 QRLVRRFLDAVAAGDKFAAAQALSSTAAITLGDRDPIELAELAEQLAGAG MAB_1289c|M.abscessus_ATCC_199 KQRVQELTAALAARDIPTVTTVLAPEAALSLDGVSEASLAEFASAASSLT MUL_0468|M.ulcerans_Agy99 -------------------------------------------------- MSMEG_3684|M.smegmatis_MC2_155 WRKVIVSGASAVAGIDSEAGRAVLIADLTP--TRIR----RVRYFVDDAA TH_3530|M.thermoresistible__bu ASKVICAGGAVVARIERAGRRDIVIAHADPRPLTIN----RIRYFTEQPQ Mflv_3431|M.gilvum_PYR-GCK WSKLIASGDAVAARVDTDGHHRILLADTAGGLTRERPTITRVRLFA---- Mvan_3185|M.vanbaalenii_PYR-1 WSKRVSSGRSVAARVEHDGRRSVLIGEIGG-TGRAGAKIARIRLFGDIH- Mb2068c|M.bovis_AF2122/97 WTKVTGAGSTVAVSLASDHRRGIMFADVPWRGNRIN----RIRYFPA--- Rv2042c|M.tuberculosis_H37Rv WTKVTGAGSTVAVSLASDHRRGIMFADVPWRGNRIN----RIRYFPA--- MMAR_3015|M.marinum_M WSKMIGSGSTVTVSVVTDHGRGIMFAELPWRGNEIH----RVRYFPS--- MAV_2473|M.avium_104 LTKMNSAGPAVAVSLHSGHGRAIMFADVAWRANAIN----RIRYFPA--- MAB_1289c|M.abscessus_ATCC_199 VDKLLAAGPSVSATVHLGNRRGIGLFEFSDNSAAPG-TLASVRLYF---- MUL_0468|M.ulcerans_Agy99 -------------------------------------------------- MSMEG_3684|M.smegmatis_MC2_155 RDG TH_3530|M.thermoresistible__bu G-- Mflv_3431|M.gilvum_PYR-GCK --- Mvan_3185|M.vanbaalenii_PYR-1 --- Mb2068c|M.bovis_AF2122/97 --- Rv2042c|M.tuberculosis_H37Rv --- MMAR_3015|M.marinum_M --- MAV_2473|M.avium_104 --- MAB_1289c|M.abscessus_ATCC_199 --- MUL_0468|M.ulcerans_Agy99 ---