For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAGAVLAAFAVVPVANAQPPKFPDVDSYPAVDLAEYQVIGAHPSMSGWVFSTPGGLRCQSNMIADLGVSC TGPIVGAATDMNSVAVSLTKPGLIARYEQSPDDHSYPLLPTGSKIAPGNGVVCAVLADDALACRAKKPDS WPKDTQDPPDRHYGEHGFVVQPSGSWSY
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0733 | - | - | 100% (168) | hypothetical protein MAB_0733 |
M. abscessus ATCC 19977 | MAB_3402 | - | 3e-10 | 28.65% (171) | hypothetical protein MAB_3402 |
M. abscessus ATCC 19977 | MAB_3472 | - | 4e-09 | 28.73% (181) | hypothetical protein MAB_3472 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3413 | - | 4e-49 | 55.36% (168) | hypothetical protein Mflv_3413 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_0501 | - | 2e-11 | 30.81% (185) | hypothetical protein MAV_0501 |
M. smegmatis MC2 155 | MSMEG_1136 | - | 1e-05 | 33.73% (83) | hypothetical protein MSMEG_1136 |
M. thermoresistible (build 8) | TH_1765 | - | 3e-06 | 35.79% (95) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4865 | - | 1e-06 | 28.21% (156) | hypothetical protein Mvan_4865 |
CLUSTAL 2.0.9 multiple sequence alignment MAB_0733|M.abscessus_ATCC_1997 ----------------MAGAVL--AAFAVVPVANAQPPKFPDVDSYPAVD Mflv_3413|M.gilvum_PYR-GCK ------MTAWVRASVLAAGVAG--AVVGASPSTAAPPPDFPDLAAYPAVD MSMEG_1136|M.smegmatis_MC2_155 -MLSRLLVGLASAAGAAVMSVP--GVAAADPQADPPPPTVPDVNAYPPVK TH_1765|M.thermoresistible__bu -VLKRVLLG---AALAAVVGVP--AVAAAEP--DRPGP--PDVNAFEPVR MAV_0501|M.avium_104 --------MLSKTFNATAAVIG--TAVISACTAHAEPPKFPDLDAFQPVD Mvan_4865|M.vanbaalenii_PYR-1 MRVTIPLIALATAALVAGCSMEKQPAPASVSTETAPPTDTPPADPPPGVD . . * . * MAB_0733|M.abscessus_ATCC_1997 LAEYQ---------VIGAHPSMSGWVFSTPGGLRCQSNMIADLGV----S Mflv_3413|M.gilvum_PYR-GCK PAAYQ---------VTGGHPSTSGWAFTTAGGLRCQNSLIPDLGI----F MSMEG_1136|M.smegmatis_MC2_155 TSEYA---------VMDN----NWYAFSIGEGITCVLQRTGSYG------ TH_1765|M.thermoresistible__bu LSEYT---------VMDG----AWFAFRGPAGITCVLQRSGGYG------ MAV_0501|M.avium_104 PAPYT---------ASGRAG--GGAYFVTPDGIQCSVPHPDHPGEHVSVS Mvan_4865|M.vanbaalenii_PYR-1 FPDLSGYTESFDQFEQTDVPRVQGFSFSTPSGLICSSNAYPEPQFES-VS . * *: * MAB_0733|M.abscessus_ATCC_1997 CTGPIVGAATDMNSVAVSLTKPGLIARYEQS-PDDHSYPLLPTGSKIAPG Mflv_3413|M.gilvum_PYR-GCK CEGPVPDAPSEVMSVNVSLTTPAGFDRREGE-LETPWSSLLPVGSRFAAG MSMEG_1136|M.smegmatis_MC2_155 CSGPIPAAPNGANLVSGGPGVPG-FASSPAP-VFAVVGDAKPLPPNTRLS TH_1765|M.thermoresistible__bu CSGPLPGAPGGANMVSGGPGVPG-FATTDAS-VFDVVGDAEPLPPNSRIS MAV_0501|M.avium_104 CAGPLPGLPDDAPRGKDGCSAVGSPTSLPTD-LGPYSFQEGTGCPILTTP Mvan_4865|M.vanbaalenii_PYR-1 CRGPIAAQGPGLWEVTTLFGQAATVVAVVDDGLPRDTPPVLPPFHKVTAS * **: . . MAB_0733|M.abscessus_ATCC_1997 NGVVCAVLADDALACRAKKPDSWPKDTQDPPDRHYGEHGFVVQPSGSWSY Mflv_3413|M.gilvum_PYR-GCK NGVVCAAPDEVTFACWAAKPDSWPADTPDPPDRHYGEHGFVLSPAGNRGY MSMEG_1136|M.smegmatis_MC2_155 YQTISCGFDGVTTACIDGRNQAGFVISPTG-SFVIGQQESDFKPTFQIG- TH_1765|M.thermoresistible__bu YQTVSCGTDGTMTTCVDSRTGAGFVIGPAG-SHILAPSNPLLNRRN---- MAV_0501|M.avium_104 PLNVGQKITTAGITCAVGGDRLTACIDPVL------NRGFVLEPSGSWTF Mvan_4865|M.vanbaalenii_PYR-1 KGAAECGVDDEGTVACR-----------------IGQDGFVLTPSSVELF .. .