For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLSKTFNATAAVIGTAVISACTAHAEPPKFPDLDAFQPVDPAPYTASGRAGGGAYFVTPDGIQCSVPHPD HPGEHVSVSCAGPLPGLPDDAPRGKDGCSAVGSPTSLPTDLGPYSFQEGTGCPILTTPPLNVGQKITTAG ITCAVGGDRLTACIDPVLNRGFVLEPSGSWTF
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_0501 | - | - | 100% (172) | hypothetical protein MAV_0501 |
M. avium 104 | MAV_0330 | - | 5e-19 | 36.57% (175) | hypothetical protein MAV_0330 |
M. avium 104 | MAV_3690 | - | 4e-14 | 32.54% (169) | hypothetical protein MAV_3690 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_5250 | - | 1e-10 | 28.09% (178) | hypothetical protein Mflv_5250 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0957 | - | 2e-18 | 33.68% (193) | hypothetical protein MAB_0957 |
M. marinum M | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_1136 | - | 9e-08 | 28.25% (177) | hypothetical protein MSMEG_1136 |
M. thermoresistible (build 8) | TH_1765 | - | 3e-11 | 30.86% (162) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0994 | - | 3e-10 | 28.48% (165) | hypothetical protein Mvan_0994 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_1136|M.smegmatis_MC2_155 -MLSRLLVGLASAAGAAVMSVPGVAAADPQADPPPPTVPDVNAYPPVKTS TH_1765|M.thermoresistible__bu -VLKRVLLG---AALAAVVGVPAVAAAEP--DRPGP--PDVNAFEPVRLS Mflv_5250|M.gilvum_PYR-GCK MVLSRSVVAAVCVAVAGVLNASGLAAAQPPPPPPPPPAPDINAYPPANPK Mvan_0994|M.vanbaalenii_PYR-1 MVRSRFVVGAVCVAAAGVLNVSGLAAAQPTPPPPPP-APDINAYPPVNPK MAV_0501|M.avium_104 ------MLSKTFNATAAVIGTAVIS--ACTAHAEPPKFPDLDAFQPVDPA MAB_0957|M.abscessus_ATCC_1997 --------------MCAALGVGLLSGGAAVAHADP-AFPDLSGFAVVPPD ...:.. :: **:..: . MSMEG_1136|M.smegmatis_MC2_155 EYAVMDNNW----YAFSIGEGITCVLQRTG--------SYGCSGPIPAAP TH_1765|M.thermoresistible__bu EYTVMDGAW----FAFRGPAGITCVLQRSG--------GYGCSGPLPGAP Mflv_5250|M.gilvum_PYR-GCK DFAVHQGSA----YAFTT-AGLTCMVQRSG--------PYGCSGVLPGAP Mvan_0994|M.vanbaalenii_PYR-1 DFAVLEGSA----YAFSS-NGLTCMLQRSG--------GYGCNGVLPGAP MAV_0501|M.avium_104 PYTASGRAG--GGAYFVTPDGIQCSVPHPD--HPGEHVSVSCAGPLPGLP MAB_0957|M.abscessus_ATCC_1997 GFFVTNENSSVRSIHFSTPDGIGCMFRASPNMTPTSRQRLSCDGAVPGIP : . * *: * . . .* * :*. * MSMEG_1136|M.smegmatis_MC2_155 NGAN-------LVSGGPG-VPGFASSPAPVFAVVGDAKPLP--------- TH_1765|M.thermoresistible__bu GGAN-------MVSGGPG-VPGFATTDASVFDVVGDAEPLP--------- Mflv_5250|M.gilvum_PYR-GCK NNAN-------LVSGRSGTVPGFGAAPQPIVG--EPVNALP--------- Mvan_0994|M.vanbaalenii_PYR-1 QNAN-------LVSGVSGGVPGWASSPAPIFG--GPVNALP--------- MAV_0501|M.avium_104 DDAPRGKDGCSAVGSPTSLPTDLGPYSFQEGTGCPILTTPP--------- MAB_0957|M.abscessus_ATCC_1997 GDAPNAPN-VPGIGGASANVPGLGGVNIPGVGTCPMGTVAQKGDGAFEIS .* :.. .. .. . MSMEG_1136|M.smegmatis_MC2_155 ----------------PNTRLSYQTISCGFD-GVTTACIDGRNQ--AGFV TH_1765|M.thermoresistible__bu ----------------PNSRISYQTVSCGTD-GTMTTCVDSRTG--AGFV Mflv_5250|M.gilvum_PYR-GCK ----------------PNTRISFGTVSCGGD-GTVTACVDSMNQ--AGFV Mvan_0994|M.vanbaalenii_PYR-1 ----------------PNTRLSFGTVSCGGD-GTLTACVDSRNQ--SGFV MAV_0501|M.avium_104 --------------LNVGQKITTAGITCAVGGDRLTACIDPVLN--RGFV MAB_0957|M.abscessus_ATCC_1997 KGAWSCGTKPEAPLLNVGQKLTYGNVTCAVGAGSVTACQVVTGDQKHGFV . ::: ::*. . . *:* *** MSMEG_1136|M.smegmatis_MC2_155 ISPTGSFVIGQQESDFKPTFQIG---- TH_1765|M.thermoresistible__bu IGPAGSHILAPSNPLLNRRN------- Mflv_5250|M.gilvum_PYR-GCK VSPDATWIVNAVNPLVARPEGTNPYFN Mvan_0994|M.vanbaalenii_PYR-1 VSPTASWIVNAVNPLLARPEGTNPYFN MAV_0501|M.avium_104 LEPSGSWTF------------------ MAB_0957|M.abscessus_ATCC_1997 LQPSGSTSF------------------ : * .: .