For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. abscessus ATCC 19977 MAB_0396c (-)

annotation: hypothetical protein MAB_0396c
coordinates: 392190 - 392798
length: 202

TQPQYPQGQFQQTQPQQFPTYQQPSPYGMPPGGYAPAPKPPRPPLTPQQKALAIVGGSLGVFLIALLVLG
LTTNNSSTESVRTHASDQIIDSPRSSGSNDEQDIKAIKQTISGMAEAAKANDFKKMLTFFCAKYREAFKD
IAGSGQAPDLNALTKSDNGPSKITGLDINGDTAVIHITDAKGKHDIEFKKETGGWKFCPRA*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. abscessus ATCC 19977MAB_0396c--100% (202)hypothetical protein MAB_0396c

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2535-3e-0637.50% (80) proline rich membrane protein
M. gilvum PYR-GCKMflv_3096-4e-0527.35% (117) hypothetical protein Mflv_3096
M. tuberculosis H37RvRv2507-3e-0637.50% (80) proline rich membrane protein
M. leprae Br4923-----
M. marinum MMMAR_3583-4e-0825.76% (198) hypothetical protein MMAR_3583
M. avium 104-----
M. smegmatis MC2 155MSMEG_2420-3e-1028.99% (207) hypothetical protein MSMEG_2420
M. thermoresistible (build 8)TH_1424-4e-0630.37% (135) Probable membrane protein
M. ulcerans Agy99MUL_3582-1e-0826.26% (198) hypothetical protein MUL_3582
M. vanbaalenii PYR-1-----

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_3096|M.gilvum_PYR-GCK          ---MSGPQGSDPTQP-WSGQQPEQGTDQPAGD--AAANQGWQPPS--TEQ
TH_1424|M.thermoresistible__bu      ---MSGPQGPDPTQP-WSGQ-PAPGQDQPSGDPTAAGQNPWQPTASGSEQ
MMAR_3583|M.marinum_M               -------MRFNPPPN-WPPP-----------------QDGWVPSPGWTPD
MUL_3582|M.ulcerans_Agy99           -------MRFNPPPN-WPPP-----------------QDGWVPSPGWTPD
Mb2535|M.bovis_AF2122/97            MNDPRRPQRFGPPLSGYGPTGPQVPPNPPTADPAYADQSPYASTYGGYVS
Rv2507|M.tuberculosis_H37Rv         MNDPRRPQRFGPPLSGYGPTGPQVPPNPPTADPAYADQSPYASTYGGYVS
MAB_0396c|M.abscessus_ATCC_199      -----------------------------------MTQPQYPQGQFQQTQ
MSMEG_2420|M.smegmatis_MC2_155      ----MTYPPSNPPASPPPGPDGPWQQPPQAYPQYGDAQQGYQPGSAPGAQ
                                                                         :  :        .

Mflv_3096|M.gilvum_PYR-GCK          P--------AWQP--PAYQPQQYPQYQQPTQPPTYSPQQYPPGDQYGQPQ
TH_1424|M.thermoresistible__bu      PQAGAEGQQQWQP--PAYGQQPYPPYQQPGQP------AYPP------PQ
MMAR_3583|M.marinum_M               P--------SWPP--PPSGWQLWIDDET--------------------LP
MUL_3582|M.ulcerans_Agy99           P--------SWPP--PPSGSQLWIDDET--------------------LP
Mb2535|M.bovis_AF2122/97            P--------PWSPGGPPPRPPQWPPGPHEASP----TQQLPQYWQYDQPP
Rv2507|M.tuberculosis_H37Rv         P--------PWSPGGPPPRPPQWPPGPHEASP----TQQLPQYWQYDQPP
MAB_0396c|M.abscessus_ATCC_199      P-------------------QQFPTYQQPSPYG---------------MP
MSMEG_2420|M.smegmatis_MC2_155      P----------AYGAPQYDPQAYGYPQQPAYGQ-----------QQYGQP
                                    *                     :                           

Mflv_3096|M.gilvum_PYR-GCK          TGEYNPAAYPPPGQYGQ-QPGYG----QYGQQP------QYGQPGQYGQQ
TH_1424|M.thermoresistible__bu      PTEYNPAAYGQPGQPGQ-FGQYGQPPGQFGAPP------YGQQPGQFGQQ
MMAR_3583|M.marinum_M               AGPTGGVAAPPPGRLGP-PGRRK-----FVVGL------AAVAAVIVAVG
MUL_3582|M.ulcerans_Agy99           AGPTGGVAAPPPGRLGP-PGRRK-----FVVGL------AAVAAVIVAVG
Mb2535|M.bovis_AF2122/97            PGGFPPDGLTPPPPQGPRTPRWLWFAAGSAVLL------VVALVIALVIA
Rv2507|M.tuberculosis_H37Rv         PGGFPPDGLTPPPPQGPRTPRWLWFAAGSAVLL------VVALVIALVIA
MAB_0396c|M.abscessus_ATCC_199      PGGYAPAPKPPRPPLTPQQKALAIVGGSLGVFL------IALLVLGLTTN
MSMEG_2420|M.smegmatis_MC2_155      QYGQPQYGQPQYGQPQYGQQPYGYGPQGYPQPQPPSSNKKGLIIGGAIAA
                                                                                      

Mflv_3096|M.gilvum_PYR-GCK          PGQYGQYPGAPGYPGQGGDEGSKRSMAVIGGVIGALVAVILAVVLVTGFW
TH_1424|M.thermoresistible__bu      PGQYGQFPPYDAARAEGSGPKSKMLLGVLGGVLG----LVVIAVLVLGLW
MMAR_3583|M.marinum_M               VAALILVPQTAADPPKSDEDQIREVLSGVVEAYNN-ADFNKYVSYFCPSE
MUL_3582|M.ulcerans_Agy99           VAALILVPQTAADPPKSDEDQIREVLSGVVEAYNN-ADFNKYVSYFCPSE
Mb2535|M.bovis_AF2122/97            NGSVKKQTAIEPLPPMPGPSPTRPTTTTPTPPSPSAAPAPTTTTGTPSET
Rv2507|M.tuberculosis_H37Rv         NGSVKKQTAIEPLPPMPGPSPTRPTTTTPTPPSPSAAPAPTTTTGTPSET
MAB_0396c|M.abscessus_ATCC_199      NSSTESVRTHASDQIIDSPRSSGSNDEQDIKAIKQTISGMAEAAKANDFK
MSMEG_2420|M.smegmatis_MC2_155      VVVLVAIIALVVLLLVPSQSSDQKAIQQLLKDVGSTSNFSTALDNYFCAG
                                                     .                                

Mflv_3096|M.gilvum_PYR-GCK          KPGFFVTTKLDVDAAQTGVRQILTDETNGYGAKN-----------VNDVT
TH_1424|M.thermoresistible__bu      KPGFLITTKLDVNAAQTGVQQILTDETNGYGAKN-----------VRDVV
MMAR_3583|M.marinum_M               RSGLGDASQLRQNRADTG--RLSFDDISIDVTGD-----------TAKVT
MUL_3582|M.ulcerans_Agy99           RSGLGDASQLRQNRSDTG--RLSFDDISIDVTGD-----------TAKVT
Mb2535|M.bovis_AF2122/97            VAGAMQTVVYDVTGEGRAISITYMDSGNVIQTEFNVALPWRKEVSLSKSS
Rv2507|M.tuberculosis_H37Rv         VAGAMQTVVYDVTGEGRAISITYMDSGNVIQTEFNVALPWRKEVSLSKSS
MAB_0396c|M.abscessus_ATCC_199      KMLTFFCAKYREAFKDIAGSGQAPDLNALTKSDN---------------G
MSMEG_2420|M.smegmatis_MC2_155      DQALFDMSALEELGIDPSLIDSPPMETPDANATIG---------DITVDG
                                                     .             :                  

Mflv_3096|M.gilvum_PYR-GCK          CNGGVSPTVKKGDTFTCEVSIDGTKRQVTVTFQDDDGTYEVGRPR
TH_1424|M.thermoresistible__bu      CNDGESPTVKKDTSFTCEVSIDGTKRRVTVTFLDDDGTYQVGRPQ
MMAR_3583|M.marinum_M               ATATVENEDEPDTQTVDFVKEDG--RWMMLLFEDKCSA-------
MUL_3582|M.ulcerans_Agy99           ATATVENEDEPDTQTVDFVKEDG--RWMMLLFEDKCSA-------
Mb2535|M.bovis_AF2122/97            LHPASVTIVNIGHNVTCSVTVAG----VQVRQRTGAGLTICDAPS
Rv2507|M.tuberculosis_H37Rv         LHPASVTIVNIGHNVTCSVTVAG----VQVRQRTGAGLTICDAPS
MAB_0396c|M.abscessus_ATCC_199      PSKITGLDINGDTAVIHITDAKG---KHDIEFKKETGGWKFCPRA
MSMEG_2420|M.smegmatis_MC2_155      DKATAKIESRGSTGTMHFRKESG---EWKVCMSDSPTLSNFPGFN
                                             . .          *      :