For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTTATRGIPMIAEYDLPTVDLLPSNTATWRIDPDRAVLLIHDMQRYFLEPLPVSLRQALVRNVAAIRDRS VAAGIPIAYTAQPGSMTQEQRGLLKDFWGPGMRVDEEHRQIVDPIAPDAGDWVFTKWRYSAFHRSALLER MHAAGRDQLVICGVYAHVGVLMTAVDAFTHDIETFLVADAIADFDDESHWMALEYAARRCAVLTVAGEVL T
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0297 | - | - | 100% (211) | isochorismatase (phenazine biosynthesis) PhzD |
M. abscessus ATCC 19977 | MAB_4406 | - | 3e-44 | 44.56% (193) | isochorismatase/phenazine biosynthesis protein PhzD |
M. abscessus ATCC 19977 | MAB_2557c | - | 8e-07 | 28.57% (98) | putative isochorismatase hydrolase EntB |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2275 | - | 2e-05 | 27.81% (151) | isochorismatase hydrolase |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_1736 | - | 3e-08 | 26.11% (180) | isochorismatase family protein |
M. smegmatis MC2 155 | MSMEG_4618 | - | 1e-07 | 25.58% (172) | isochorismatase family protein |
M. thermoresistible (build 8) | TH_2198 | - | 1e-05 | 28.42% (95) | isochorismatase family protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4420 | - | 6e-07 | 28.82% (170) | isochorismatase hydrolase |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_4618|M.smegmatis_MC2_155 ----------------------MSDTAVVIVD------MLNTYEHEDAEL TH_2198|M.thermoresistible__bu ----------------------MSDTAVVVVD------MFNTYDHEDAEL MAV_1736|M.avium_104 ---------------------------MLVVD------MMNSYQHPDAEN Mflv_2275|M.gilvum_PYR-GCK ---MSDPQTLRALAGLPLTPMSLADSALVLID------CQNTYTRGVMEL Mvan_4420|M.vanbaalenii_PYR-1 ---MSDLPTLRSLSGLPLQPVSLADSALVLID------CQNTYTYGVMEL MAB_0297|M.abscessus_ATCC_1997 MTTATRGIPMIAEYDLPTVDLLPSNTATWRIDPDRAVLLIHDMQRYFLEP :* : * MSMEG_4618|M.smegmatis_MC2_155 LAPNVEKIIDPLVKLIGEARDREDVDLIYVNDNYGDFTAQFSDIVA---- TH_2198|M.thermoresistible__bu LTPNVESILDPLAKLIAEARHRDDVDLIYVNDNHGDFTAEFSDVVR---- MAV_1736|M.avium_104 LIPNVEKIIEPLTGLVRRARESAGVDLVYVNDNYGDFTAQFSDLVR---- Mflv_2275|M.gilvum_PYR-GCK DG--VQAALDEAATLLDRAR-TAGIAVVHIQHDDGPGSL----------- Mvan_4420|M.vanbaalenii_PYR-1 EG--VQAALDEAAALLDRAR-TAGIPVVHIQHDDGPGSP----------- MAB_0297|M.abscessus_ATCC_1997 LPVSLRQALVRNVAAIRDRSVAAGIPIAYTAQP-GSMTQEQRGLLKDFWG :. : . : .: : : . * : MSMEG_4618|M.smegmatis_MC2_155 --DALDGKRPDLVRPILPYDG-CRLLTKVRHSVFYATALDYLLGRLGAKR TH_2198|M.thermoresistible__bu --TALDGARPDLVRPIVPDDG-CRALLKVRHSVFYATALEYLLTRLSARR MAV_1736|M.avium_104 --SALDGARPDLVKPIAPVSGEAASLTKVRHSAFYSTALAYLLSRLGTKR Mflv_2275|M.gilvum_PYR-GCK --YDIEGESGAIVDRVAPRDG-ERVVVKNYPNSFVQTDLDDVLKSYGASN Mvan_4420|M.vanbaalenii_PYR-1 --YDITAEIGAIVDRVAPRGD-EPVVVKNYPNSFVQTDLDDRLKAVDASN MAB_0297|M.abscessus_ATCC_1997 PGMRVDEEHRQIVDPIAPDAG-DWVFTKWRYSAFHRSALLERMHAAGRDQ : :* : * . . * . * : * : . . MSMEG_4618|M.smegmatis_MC2_155 VILAGQVTEQCILYSALDAY-VRHFELVVPSDAVAHIDAELG-------- TH_2198|M.thermoresistible__bu VILTGQVTEQCILYSALDAY-VRHFEVVVPPDAVAHIDAGLG-------- MAV_1736|M.avium_104 LIITGQVTEQCILYTALDAY-VRHFPVVIPTDAVAHIDPELG-------- Mflv_2275|M.gilvum_PYR-GCK LVLAGFMTHMCVNSTARGAFNLGYAPTVVAAATATRALPGVDGDTVAASA Mvan_4420|M.vanbaalenii_PYR-1 LVLAGFMTHMCVNSTARGAFNLGYAPTVVAAATATRALPGVGGEDVPAAA MAB_0297|M.abscessus_ATCC_1997 LVICGVYAHVGVLMTAVDAF-THDIETFLVADAIADFDDESH-------- ::: * :. : :* .*: .: . : : MSMEG_4618|M.smegmatis_MC2_155 -DAALEMMRRNMSADVIPAVDCLS- TH_2198|M.thermoresistible__bu -EAALQMMARNMSAELPPSADCLP- MAV_1736|M.avium_104 -AAACKMMEQNMSAELTTAADCLG- Mflv_2275|M.gilvum_PYR-GCK VHAASLAAVADLFAVVVPGEKDIPG Mvan_4420|M.vanbaalenii_PYR-1 VHSASLAAVADLFAVVVPGARDIPD MAB_0297|M.abscessus_ATCC_1997 --WMALEYAARRCAVLTVAGEVLT- * : . :