For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTVRIMSWRTAGFWLAAGLVAVLLQHWLIPLNAPNSFGLFSNGGDLMTYRFGGLRVLHRELLYATEIPDA GWFTYTPFAAMLFAPLGFVTLGAAKVIWFLVNLGALFIIIWRCWRVLGFSANAPLAIACVGMNLVAWDIQ PIHGTLWQGQVNLVLAALIIWDLTRPEGARWRGWSVGLASGVKLTAVIFVPYLLITRQWRAVAAAAVTAI GTVVLGWIVLPSDSSDYWLGAVRTTGHIGSLDHPANSSIGGALANVYTPQPMPTWLWVLLAGGAALLGMA AAWRAHRTGRELLAITVVGMVGCVVSPLAWTHHWVWTVPLMVLLVNQIMTTQGGARWRWAAATTVIAVLV SMWWYWGLYVRAMRLNPDFESYITGWGAVIAHMSRAERVFDTALYPLLFLTVATWVLATKSLRAGTVQE
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_0281 | - | - | 100% (419) | hypothetical protein MAB_0281 |
M. abscessus ATCC 19977 | MAB_0096 | - | 2e-75 | 37.78% (405) | hypothetical protein MAB_0096 |
M. abscessus ATCC 19977 | MAB_1985 | - | 2e-46 | 34.72% (360) | hypothetical protein MAB_1985 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1190 | pimE | 1e-36 | 32.51% (323) | mannosyltransferase |
M. gilvum PYR-GCK | Mflv_0993 | - | 9e-64 | 40.06% (322) | hypothetical protein Mflv_0993 |
M. tuberculosis H37Rv | Rv1159 | pimE | 1e-36 | 32.51% (323) | mannosyltransferase |
M. leprae Br4923 | MLBr_00893 | - | 5e-32 | 30.06% (346) | hypothetical protein MLBr_00893 |
M. marinum M | MMAR_4292 | pimE | 8e-35 | 31.25% (320) | transmembrane protein |
M. avium 104 | MAV_1298 | pimE | 2e-35 | 31.58% (342) | mannosyltransferase |
M. smegmatis MC2 155 | MSMEG_5149 | pimE | 1e-35 | 31.36% (338) | mannosyltransferase |
M. thermoresistible (build 8) | TH_1105 | - | 2e-33 | 33.03% (330) | Probable conserved integral membrane protein |
M. ulcerans Agy99 | MUL_1006 | pimE | 8e-34 | 30.63% (320) | mannosyltransferase |
M. vanbaalenii PYR-1 | Mvan_3543 | - | 8e-35 | 33.23% (334) | putative integral membrane protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb1190|M.bovis_AF2122/97 MCRTLIDGPVRSAIAKVRQIDTTSSTPAAAR---RVTSPPARETRAAVLL Rv1159|M.tuberculosis_H37Rv MCRTLIDGPVRSAIAKVRQIDTTSSTPAAAR---RVTSPPARETRAAVLL MMAR_4292|M.marinum_M MTGHLGN----WVGTRVGRIDTTSAAPAASTTRHKAVSPKVWGRRGAPLL MUL_1006|M.ulcerans_Agy99 MTGHLGN----WVGTRVGRIDTTSAAPAASTTRHKAVSPKVWGRRGAPLL MAV_1298|M.avium_104 --------------------------------------------MAAPLL MSMEG_5149|M.smegmatis_MC2_155 ------------------------------------------------ML TH_1105|M.thermoresistible__bu ----------------------------------------------MFQL Mvan_3543|M.vanbaalenii_PYR-1 --------------------------MSNRQSPGGAGWKPTLA-WRLFQL MLBr_00893|M.leprae_Br4923 --------------------------MSRQQTPEVGNKHRQIGRCCLLWL MAB_0281|M.abscessus_ATCC_1997 ------------------------MTVRIMSWRTAGFWLAAGLVAVLLQH Mflv_0993|M.gilvum_PYR-GCK --------------------------MSRLALSRPALGVLAGWASLSVVL Mb1190|M.bovis_AF2122/97 LVLSVGARLAWTYLAPNGANFVDLHVY-VSGAASLDHPGTLYGYVYADQT Rv1159|M.tuberculosis_H37Rv LVLSVGARLAWTYLAPNGANFVDLHVY-VSGAASLDHPGTLYGYVYADQT MMAR_4292|M.marinum_M LVFSVAARLAWTYLTSNGANFVDLHVY-VGGAAALDHPGSLYSYVYADQT MUL_1006|M.ulcerans_Agy99 LVFSVAARLAWTYLTSNGANFVDLHVY-VGGAAALGHPGSLYSYVYADQT MAV_1298|M.avium_104 LVASVAARLAWTYLVPNGANFVDLHVY-LGGAAALDHPGTLYSYVYADQT MSMEG_5149|M.smegmatis_MC2_155 LVVSILARLAWTYLVPNGANFVDLHVY-VGGADALDGPGALYDYVYADQT TH_1105|M.thermoresistible__bu ITLAALIWAGWRLLG-HLPYRIDIDVYRMGGRAWLDGDPLYADGAIFETR Mvan_3543|M.vanbaalenii_PYR-1 LTFAALAAAAWRLLG-HVPYRIDIDVYRMGGRAWLDGQSLYADGAMFQTR MLBr_00893|M.leprae_Br4923 LAVTALGQVAWQLLG-HTPYRIDIDIYQMGGQAWLDGRPLYSGDVLFHTP MAB_0281|M.abscessus_ATCC_1997 WLIPLNAPNSFGLFS----NGGDLMTYRFGGLRVLHR------ELLYATE Mflv_0993|M.gilvum_PYR-GCK ALTTVGPTANWGLLD----GGGDLDVYRRGAWHVLSG------LPLYDFP . : : *: * .. * Mb1190|M.bovis_AF2122/97 PDFPLPFTYPPFAAVVFYPLHLVPFGLIALLWQVVTMAALYGAVRISQRL Rv1159|M.tuberculosis_H37Rv PDFPLPFTYPPFAAVVFYPLHLVPFGLIALLWQVVTMAALYGAVRISQRL MMAR_4292|M.marinum_M PDFPLPFTYPPFAAVVFYPLHLLPFGLVAFLWQLATIAALYGAVRISQRL MUL_1006|M.ulcerans_Agy99 PDFPLPFTYPPFAAVVFYPLHLLPFGLVAFLWQLATITALYGAVRISQRL MAV_1298|M.avium_104 PDFPLPFTYPPFAAIVFYPLHLLPFGLVALGWQLATIAALYGAVRISQRL MSMEG_5149|M.smegmatis_MC2_155 PDFPLPFTYPPFAAIVFYPLHLLPFGVVAFIWQIGIIAALYGVVRVSQRL TH_1105|M.thermoresistible__bu AGLNLPFTYPPLAAVAFAPFAWLSLEAAAVAITLTTLVLLVVATVIVLTR Mvan_3543|M.vanbaalenii_PYR-1 GGLELPFTYPPLAAVAFAPFALLSLEAASVAITLTTLILLLVSTVIVLTR MLBr_00893|M.leprae_Br4923 IGLNLPFTYPPLAAIAFCPFAWLHMPAASVAITLTTLMLLIVSTIIVLTR MAB_0281|M.abscessus_ATCC_1997 IPDAGWFTYTPFAAMLFAPLGFVTLGAAKVIWFLVNLGALFIIIWRCWRV Mflv_0993|M.gilvum_PYR-GCK VDKKLFYTYTPFSALVFAPLELLPAEPDRHIWLALNLAVLIAVVVQSWRL :**.*::*: * *: : : * Mb1190|M.bovis_AF2122/97 MGGTA-----------ETGHFAAMLWTAIAIWIEPLRSTFDYGQINVLLM Rv1159|M.tuberculosis_H37Rv MGGTA-----------ETGHFAAMLWTAIAIWIEPLRSTFDYGQINVLLM MMAR_4292|M.marinum_M IGVPA-----------ERGHRAAMVWTAVAIWIEPLRSTFDYGQINVLLM MUL_1006|M.ulcerans_Agy99 IGVPA-----------ERGHRAAMVWTAVAIWIEPLRSTFDYGQINVLLM MAV_1298|M.avium_104 LGVAAG----------AHGRRVAMVWTAVTIWIEPLRSTFDYGQVNVLLM MSMEG_5149|M.smegmatis_MC2_155 MGLQS-------------QRRVAMLWTALGIWTEPLRSTFDYGQVNVVLV TH_1105|M.thermoresistible__bu LDVWPDTAMTTEPAWLRRSWLAAAIVAPAIILLEPIRSNFEFGQINVVLM Mvan_3543|M.vanbaalenii_PYR-1 LDVWPSTRVTSEPAWLRRCWLAAAIVAPAVLYLEPLRANFDFGQINVVLM MLBr_00893|M.leprae_Br4923 LDVWAMSRAVPGPAWLRRLWLAVIIVSPAAIWLEPISSNFAFGQINVVLM MAB_0281|M.abscessus_ATCC_1997 LGFSAN----------APLAIACVGMNLVAWDIQPIHGTLWQGQVNLVLA Mflv_0993|M.gilvum_PYR-GCK LGYRVD----------RALVGVSVLMALGCVFVEPVRTTLFFGQINLILM :. . :*: .: **:*::* Mb1190|M.bovis_AF2122/97 LAALWAVYTPR-WWLSGLLVGVASGVKLTPAITAVYLVGVRRLHAAAFSV Rv1159|M.tuberculosis_H37Rv LAALWAVYTPR-WWLSGLLVGVASGVKLTPAITAVYLVGVRRLHAAAFSV MMAR_4292|M.marinum_M LAALWAVYTTR-WWLSGLLVGVAAGIKLTPAITAVYLAGVRRWRAAVCSA MUL_1006|M.ulcerans_Agy99 LAALWAVYTTR-WWLSGLLVGVAAGIKLTPAITAVYLAGVRRWRAAVCSA MAV_1298|M.avium_104 TAVLWAVYSTR-WWVSALLVGLAAGIKLTPAVSGVYLAGARRWAATVFSA MSMEG_5149|M.smegmatis_MC2_155 LAVLCAVSTTR-WWLSGLLVGLAAGIKLTPAVAGLYFLGARRWAAVACSA TH_1105|M.thermoresistible__bu TLVIADCVPRRTPWPRGALLGVAIALKLTPAVFLLYFLLRRDGRALITAS Mvan_3543|M.vanbaalenii_PYR-1 TLVIADCVPRRTPWPRGVLLGVAIAVKLTPAVFLLYFLLRRDVRALLVTA MLBr_00893|M.leprae_Br4923 TLVIADCVPRRTPWPRGLMLGLGIALKLTPAVFLLYFVLRRDNRAALTSW MAB_0281|M.abscessus_ATCC_1997 ALIIWDLTRPEGARWRGWSVGLASGVKLTAVIFVPYLLITRQWRAVAAAA Mflv_0993|M.gilvum_PYR-GCK LLILSDTVGATRSRLAGIGTGLAAGIKLTPLYFVLYFLTLRQRRVAVTAV : . *:. .:***. *: * . : Mb1190|M.bovis_AF2122/97 VVFLATVGVSLLVVGDEARYYFTDLLGDAGRVGP-IATSFNQSWRGAISR Rv1159|M.tuberculosis_H37Rv VVFLATVGVSLLVVGDEARYYFTDLLGDAGRVGP-IATSFNQSWRGAISR MMAR_4292|M.marinum_M IVFLVSVGVSLLIVGGQARYYFTDLLGDAHRVGP-IATSFNQSWRGAISR MUL_1006|M.ulcerans_Agy99 IVFLVSVGVSLLIVGGQARYYFTDLLGDAHRVGP-IATSFSQSWRGAISR MAV_1298|M.avium_104 VIFLATIGISVLVVGDQTRYYFTELLGDAHRVGP-IATSFNQSWRGGLSR MSMEG_5149|M.smegmatis_MC2_155 AVFFATVGVSWLVVGAQARRYFTELLGDADRIGP-IGTSFNQSWRGGISR TH_1105|M.thermoresistible__bu VTAVLATLAGFALAWRDSWEYWTHTVSNTDRIGT-ATLNTNQNIAGALAR Mvan_3543|M.vanbaalenii_PYR-1 ASAVVATLAGFALAWRDSWEYWLETVRNTDRIGT-ATLNTNQNIAGVLAR MLBr_00893|M.leprae_Br4923 ASFAGATLVGFVLAWRDSWEYWTHTVHNTERIGA-AALNTDQNIAGALAR MAB_0281|M.abscessus_ATCC_1997 VTAIGTVVLGWIVLPSDSSDYWLGAVRTTGHIGS-LDHPANSSIGGALAN Mflv_0993|M.gilvum_PYR-GCK AVFAATVVVGLILLPRDSLTYWAGTFLRSERIGDRLGHPSNQSLRGMLAR : . : :: *: . : ::* ... * ::. Mb1190|M.bovis_AF2122/97 I-LGHDAGFGPLVLAAIASTAVLAILAWRALD-----RSDRLGKLLVVEL Rv1159|M.tuberculosis_H37Rv I-LGHDAGFGPLVLAAIASTAVLAILAWRALD-----RSDRLGKLLVVEL MMAR_4292|M.marinum_M I-LGHDAGFGPLVLAAIAVTAVLAVLAWRALE-----PADHLGKLLVVEL MUL_1006|M.ulcerans_Agy99 I-LGHDAGFGPLVLAAIAVTAVLAVLAWRALE-----PADHLGKLLVVEL MAV_1298|M.avium_104 I-LGHDVGFGPLLVAAVAGTAVLAVLAWRALD-----RSDRLGRLIVVEV MSMEG_5149|M.smegmatis_MC2_155 I-LGHDAGFGPLVLIGIGITAVLALLAWRAIGG----AQDRLGGILVVSL TH_1105|M.thermoresistible__bu LGLDEDTRFLLWVLACFAVLALTVWAVRRVLRSRVCADEASVLALICVAM Mvan_3543|M.vanbaalenii_PYR-1 LGLGEGERFVVWTVLCFAVLGLTVWAARRALR-----AEQPVLALICVAM MLBr_00893|M.leprae_Br4923 LGLGEHERFLLWAAGCLLVLAATAWAMLRVLR-----AGEPMLAVICVAL MAB_0281|M.abscessus_ATCC_1997 VYTPQPMPTWLWVLLAGGAALLGMAAAWRAHR-----TGRELLAITVVGM Mflv_0993|M.gilvum_PYR-GCK LLDDEP-PVWLWLALAVLIGVASLTLAVWLHR-----TGERLLSVTVVGL : . : : * : Mb1190|M.bovis_AF2122/97 FGLLLSPISWTHHWVWLVPLMIWLIDGPAR-----------ERPGARILG Rv1159|M.tuberculosis_H37Rv FGLLLSPISWTHHWVWLVPLMIWLIDGPAR-----------ERPGARILG MMAR_4292|M.marinum_M FGLLLSPISWTHHWVWLVPLMIWLLSGPLR-----------DRLGARILG MUL_1006|M.ulcerans_Agy99 FGLLLSPISWTHHWVWLVPLMIWVLSGPLR-----------DRLGARILG MAV_1298|M.avium_104 FGLLLSPISWTHHWVWLVPLMIWAIHGPVR-----------AWRGARLVG MSMEG_5149|M.smegmatis_MC2_155 FGLVLSPISWTHHWVWLIPLMMWLLHGPLS-----------ALRGARILG TH_1105|M.thermoresistible__bu FGLVVSPVSWSHHWVWALPAVLVAAVVSARHR-------VRALGVTAAAG Mvan_3543|M.vanbaalenii_PYR-1 FGLVVSPVSWSHHWVWALPTVLVTAVLAVRLR-------HVALAVVSAAG MLBr_00893|M.leprae_Br4923 FGLVVSPVSWSHHWVWMLPAVLVTGILSWRRQ-------NVAVAVISAAG MAB_0281|M.abscessus_ATCC_1997 VGCVVSPLAWTHHWVWTVPLMVLLVNQIMTTQGGARWRWAAATTVIAVLV Mflv_0993|M.gilvum_PYR-GCK SSAVVSPFSWTHHWVWVVPLMVWFVHRALT-----CWRWWLAPAALFVAL . ::**.:*:***** :* :: Mb1190|M.bovis_AF2122/97 WGWLVLTIVGVPWLLSFAQPSIW-QIGRPWYLAWAGLVYVVATLATLGWI Rv1159|M.tuberculosis_H37Rv WGWLVLTIVGVPWLLSFAQPSIW-QIGRPWYLAWAGLVYVVATLATLGWI MMAR_4292|M.marinum_M WGWLALTVIGVPWLLSFAQPTIW-QIGRPWYLAWAGLVYVVATLATLGWI MUL_1006|M.ulcerans_Agy99 WGWLALTVIGVPWLLSFAQPTIW-QIGRPWYLAWAGLVYVVATLATLGWI MAV_1298|M.avium_104 WGWLALTVIGVPWLLSFAQPNIW-QIGRPWYLAWAGLVYIVAAVATLVWI MSMEG_5149|M.smegmatis_MC2_155 WGWLALTLLGVPWLLSFAQPTIW-EIGRPWYLAWAGLVYIVATLATLGWI TH_1105|M.thermoresistible__bu VALLVWTPIRLLPENEEMTASLWRQLLGGSYVWWALVLIVVIGALGS-GS Mvan_3543|M.vanbaalenii_PYR-1 LALMVWTPITLLPEHRETTASLWRQLVGGSYLWWALAVIVVSATVTLPRP MLBr_00893|M.leprae_Br4923 VALMRWTPIGLLPQHQETTAVWWRQLAGMSYVWWALAVIVATGLTVTTRV MAB_0281|M.abscessus_ATCC_1997 SMWWYWGLYVRAMRLNPDFESYITGWGAVIAHMSRAERVFDTALYPLLFL Mflv_0993|M.gilvum_PYR-GCK GAWPFWFRNLADPRIGFYLFPYTH---VPEVLLRNAYLWLFAVLLIWLGV . Mb1190|M.bovis_AF2122/97 AASERYVRIRPRRMAN----- Rv1159|M.tuberculosis_H37Rv AASERYVRIRPRRMAN----- MMAR_4292|M.marinum_M ATTRQRAR------------- MUL_1006|M.ulcerans_Agy99 ATTRQRAR------------- MAV_1298|M.avium_104 AAAGRRAGHQVTAPSVTPA-- MSMEG_5149|M.smegmatis_MC2_155 AFSRKGSG------------- TH_1105|M.thermoresistible__bu ARPRP-VDAERVPTGG----- Mvan_3543|M.vanbaalenii_PYR-1 GRDAPGLGAAQPATNGVKA-- MLBr_00893|M.leprae_Br4923 TSQDSATQTLLTPVSTAS--- MAB_0281|M.abscessus_ATCC_1997 TVATWVLATKSLRAGTVQE-- Mflv_0993|M.gilvum_PYR-GCK RAARSVAGAKAAGEEPVRAEE