For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4296 | - | - | 100% (472) | putative protein of unknown function DUF690 |
| M. thermoresistible (build 8) | TH_3503 | - | 9e-55 | 32.23% (484) | PUTATIVE protein of unknown function DUF690 |
| M. thermoresistible (build 8) | TH_3098 | - | 4e-27 | 39.60% (149) | PUTATIVE protein of unknown function DUF690 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3480c | - | 1e-107 | 47.71% (480) | hypothetical protein Mb3480c |
| M. gilvum PYR-GCK | Mflv_4962 | - | 1e-113 | 50.11% (469) | hypothetical protein Mflv_4962 |
| M. tuberculosis H37Rv | Rv3450c | - | 1e-107 | 47.71% (480) | hypothetical protein Rv3450c |
| M. leprae Br4923 | MLBr_01544 | - | 1e-58 | 32.93% (495) | hypothetical protein MLBr_01544 |
| M. abscessus ATCC 19977 | MAB_3759c | - | 1e-113 | 48.25% (487) | hypothetical protein MAB_3759c |
| M. marinum M | MMAR_1099 | - | 1e-103 | 46.74% (475) | hypothetical protein MMAR_1099 |
| M. avium 104 | MAV_4392 | - | 1e-102 | 46.47% (482) | hypothetical protein MAV_4392 |
| M. smegmatis MC2 155 | MSMEG_1534 | - | 1e-110 | 48.73% (472) | hypothetical protein MSMEG_1534 |
| M. ulcerans Agy99 | MUL_0857 | - | 1e-104 | 46.53% (475) | hypothetical protein MUL_0857 |
| M. vanbaalenii PYR-1 | Mvan_1444 | - | 1e-137 | 56.69% (471) | hypothetical protein Mvan_1444 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3480c|M.bovis_AF2122/97 ------------MPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALR
Rv3450c|M.tuberculosis_H37Rv ------------MPSPATTWLHVSGYRFLLRRIECALLFGDVCAATGALR
MMAR_1099|M.marinum_M ---MDAGDSRGWPPGRPTTWLQVSAYRFLVRRLECALLRGGLDPADGRPR
MUL_0857|M.ulcerans_Agy99 ---MDAGDSRGWPPGRPTTWLQVSAYRFLVRRLECALLRGGLDPADGRPR
MAV_4392|M.avium_104 ------------MPRRPTTWLQVSAYRYLSRRLECALLGQDPAAAGMRAR
Mflv_4962|M.gilvum_PYR-GCK -------------MGQPVTRLQISGQRFLTRRMEHALVRADARMLDDPLR
Mvan_1444|M.vanbaalenii_PYR-1 -------------MRQPTTRLQVSGHRFLMRRMEHALVRGDARMLDDPLR
MSMEG_1534|M.smegmatis_MC2_155 ------------MARQPVTRLERSGRRFLIRRTMHALVRGDARMIDDPLR
TH_4296|M.thermoresistible__bu -------------VGQPTTRLQVSGYRFMLRRMEHALVRADVRMLDDPLR
MAB_3759c|M.abscessus_ATCC_199 ------------MARQPTTRLQVSGYRFLVRRMEHALVRRDVRMIHDPMR
MLBr_01544|M.leprae_Br4923 MAEESSGRRGSEYGLGLSTRTQVTGYQFLARRTAMALTRWRVRMEVEPGR
* . :. ::: ** ** *
Mb3480c|M.bovis_AF2122/97 ARTTSLALGCVLAIVAAMGCAFVALLRPQSALGQAPIVMGRESGALYVRV
Rv3450c|M.tuberculosis_H37Rv ARTTSLALGCVLAIVAAMGCAFVALLRPQSALGQAPIVMGRESGALYVRV
MMAR_1099|M.marinum_M ASAVSLAAGCVLSVVVLVGCVISALLRPQVGLGDAQIVVGRESGALYVRV
MUL_0857|M.ulcerans_Agy99 ASAVSLAAGCVLSVVVLVGCVISALLRPQVGLGDAQIVVGRESGALYVRV
MAV_4392|M.avium_104 GQPAALAAGAVLTAAALAAATLLGLLRPHVALDGARVVLARDSGALFVRV
Mflv_4962|M.gilvum_PYR-GCK AQSLSLVVGAVLAAIAVAVCAVIAVVRPGGTLGDARIVVVRESGAMFVRL
Mvan_1444|M.vanbaalenii_PYR-1 GQSLSMTAGAVLAVIAVTVCAVLAFIRPGGELGDAPLVVVRESGAMYVRI
MSMEG_1534|M.smegmatis_MC2_155 AQSVSFAAGCIVTVLAAVVSAVLALVRPGDTLSDAPILLARNSGALHVRI
TH_4296|M.thermoresistible__bu AQSLALTAGAVLAAVAVAGCAVLALLRPAGRLDSAQIVMERESGALYVRI
MAB_3759c|M.abscessus_ATCC_199 SQSSSLMVGIVLATVVVAGCAILAFFRPNMPLGDQPIVMGKDTGAVYVRI
MLBr_01544|M.leprae_Br4923 RQTLAVVASVSAALLGCLGALLWSFISPSGQLNESPIIIDRDSGALYVRV
. :. . : . . ... * *. ::: :::**:.**:
Mb3480c|M.bovis_AF2122/97 DDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGPLLGIPGAPQLLD
Rv3450c|M.tuberculosis_H37Rv DDVWHPVLNLASARLIAATNANPQPVSESELGHTKRGPLLGIPGAPQLLD
MMAR_1099|M.marinum_M GDTWHPVLNLASARLIAGTGANPKPVREAEVIRAKRGPLLGIPGAPQFVG
MUL_0857|M.ulcerans_Agy99 GDTWHPVLNLASARLIAGTGANPKPVREAEVIRVKRGPLLGIPGAPQFVG
MAV_4392|M.avium_104 GDTWHPVLNLASARLIAASAVDPLTIRQADLDGSKRGPLLGIPGAPAFLG
Mflv_4962|M.gilvum_PYR-GCK DDVLHPVYNLASARLLLGSPEVPRVVAQRAIDHAERGARLGIPAAPEQIP
Mvan_1444|M.vanbaalenii_PYR-1 DDTMHPVFNLASARLILGTAAEPRMVTQRAVDRAEIGPQVGIPGAPGQIS
MSMEG_1534|M.smegmatis_MC2_155 GDTVHPVLNLASARLIVQNPADPVLVDDAAIDAAPRGPLVGIPGAPARIH
TH_4296|M.thermoresistible__bu DDTWHPTPNLASARLAARTAADPQPVSATALADAERGPMVGIPGAPGSIG
MAB_3759c|M.abscessus_ATCC_199 QDTLHPALNLASARLISGNNENPKPVKDSELAKARRGPLVGIPGAPASIP
MLBr_01544|M.leprae_Br4923 GDRLYPALNLASARLITGRPDNPHAVRSSQIATLPHGPLVGIPGAPSELS
* :*. ******* * : : *. :***.** :
Mb3480c|M.bovis_AF2122/97 QPLAGAESAWAICDSD---------NGGSTTVVVGPAEDSSAQVLTAE-Q
Rv3450c|M.tuberculosis_H37Rv QPLAGAESAWAICDSD---------NGGSTTVVVGPAEDSSAQVLTAE-Q
MMAR_1099|M.marinum_M QSLPVQESAWTICDTD---------RGAATTLLVGRPAQQSVRRLVAE-Q
MUL_0857|M.ulcerans_Agy99 QSLPVQESAWTICDTD---------RGAATTLLVGRPAQQSVRRLVAE-Q
MAV_4392|M.avium_104 RPLAAADTAWSLCDSDG--------AGATTTILLGRPDAASMRVLGGG-Q
Mflv_4962|M.gilvum_PYR-GCK TPLSADEAAWSVCDDD----------RGVTTVVAGPPATEGMTADR----
Mvan_1444|M.vanbaalenii_PYR-1 PPLQAAESGWTVCDE-----------RSGTTVTAGPVAGSAMTPGA----
MSMEG_1534|M.smegmatis_MC2_155 PPLSADEITWALCEDL---------ASESTTLIAGRSGLAPLRPGR----
TH_4296|M.thermoresistible__bu RALPPGQSTWTLCDG-----------TTTTLWVGEPVAGDRLGDRRDDPD
MAB_3759c|M.abscessus_ATCC_199 GALTGDDTIWTVCDVATPPP----SSTVTTTVIAGKVTLENGNQEMPKDR
MLBr_01544|M.leprae_Br4923 PETP-QTSSWLVCDTVATSTGIGSSSGVTVTVIDGSPDLSGHRRVLTGSD
* :*: .
Mb3480c|M.bovis_AF2122/97 MILVATES--GSPTYLLYGGRRAVVDLADPAVVWALRLQGRVP---HVVA
Rv3450c|M.tuberculosis_H37Rv MILVATES--GSPTYLLYGGRRAVVDLADPAVVWALRLQGRVP---HVVA
MMAR_1099|M.marinum_M TILVATES--GSPAYLLYDGHRAVVDLADPAVRRALRLEGRTP---YRVS
MUL_0857|M.ulcerans_Agy99 TILVATES--GSPAYLLYDGHRAVVDLADPAVRRALRLEGRTP---YRVS
MAV_4392|M.avium_104 AMLVAAAA--GSPAYLLHDGHRARVDLADAAVVRTLRLEGRAP---RLVS
Mflv_4962|M.gilvum_PYR-GCK HVLVTPRGQSAAVTYLLHGGRRSRVDLRHPAVVRALRLDGVVP---QPVS
Mvan_1444|M.vanbaalenii_PYR-1 SVLVTPRGGSAALTYLLHGRWRSRVDLRHPAVVRALRLDGVVP---QPVS
MSMEG_1534|M.smegmatis_MC2_155 AVPVAARG--AVTTYLLFDGRKAQVDLREGAVVRALRLEDVTP---VPVS
TH_4296|M.thermoresistible__bu AVLVRSAG--GHGTYLLHDGARAAVDLRDTAVVRALRLENVEP---QSVS
MAB_3759c|M.abscessus_ATCC_199 YALVTVNS----QMYLLYDGKRAAVDLTNPAVTRALRLEGVTP---RPIS
MLBr_01544|M.leprae_Br4923 AVVLHYGG----DAWVIRQGRRSRIDAMNRSVLLPLGLTPEQVSQARPMS
: . ::: :: :* . :* .* * ::
Mb3480c|M.bovis_AF2122/97 QSLLNAVPEAPRITAPRIRGGGR-ASVGLPGFLVGGVVRITRASG-----
Rv3450c|M.tuberculosis_H37Rv QSLLNAVPEAPRITAPRIRGGGR-ASVGLPGFLVGGVVRITRASG-----
MMAR_1099|M.marinum_M RSLLSAVPEVPPISALRIGHAGEPALAGKLGFSVGTVLSITAGGG-----
MUL_0857|M.ulcerans_Agy99 RSLLSAVPEVPPISVLRIGHAGEPALAGKLGFSVGTVLSITAGGG-----
MAV_4392|M.avium_104 QSLLEAVPEAAPIAVPRIPGLGG-AAPGLPGFAIGTVLRIIRADG-----
Mflv_4962|M.gilvum_PYR-GCK MELLAALPEAPAIEPPRIPGLGAPAPGALRNRTVGTVVTVAHAGTGSPRG
Mvan_1444|M.vanbaalenii_PYR-1 PALLAAVPEAPAISPPHIPALGSPGPSTLREHPVGTVVRAS--GTDAT--
MSMEG_1534|M.smegmatis_MC2_155 PTLLDSVPEAPAVRAPVIPDVGAPGPSAVNGLPVGSVVRVSRAVPDDSAR
TH_4296|M.thermoresistible__bu DAVLEAIPESPPLTPPGIPAAGTPGPAPLSRIPVGTVVRLARASAAGGEV
MAB_3759c|M.abscessus_ATCC_199 MNVLNAIPEVPAIAPPPIPDAGAASPITTAGVRVGSVIKMSRADS-----
MLBr_01544|M.leprae_Br4923 RALFDALPVGPDLVVPDVPNEGNPASFPGAPGPVGTVIVTPQISGP----
:: ::* . : : * . :* *:
Mb3480c|M.bovis_AF2122/97 -------DEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNVPTVAPDVIRV
Rv3450c|M.tuberculosis_H37Rv -------DEYYVVLEDGVQRIGQVAADLLRFGDSQGSVNVPTVAPDVIRV
MMAR_1099|M.marinum_M -------AAYYVVLAQGVQRIGQVAADLLRFSDSQGAANAIAVAPDVIRA
MUL_0857|M.ulcerans_Agy99 -------AAYYVVLAQGVQRIGQVAADLLRFSDSQGAANAIAVAPDVIRA
MAV_4392|M.avium_104 -------DEYYAVLAGGVQRIGRVAADLLRLSNPQGGADAVTVAPDALRT
Mflv_4962|M.gilvum_PYR-GCK A------GDHFVVLADGLQRIGEVTADLIRFTDARAGAEIPAVSADIVGA
Mvan_1444|M.vanbaalenii_PYR-1 -------AEYFVVLAEGLQRIGEVAADLIRYTDRRPGAEIPTVSADAVGA
MSMEG_1534|M.smegmatis_MC2_155 G------EEFFVVLTGGLQRVDRVVADLIRFTYPQPDGEPPLLAADVIAG
TH_4296|M.thermoresistible__bu GPESGTESDYFVVLADGVQRVGRITADLIRFTTAQPHREIATVAAEVIAA
MAB_3759c|M.abscessus_ATCC_199 -------AEYYVVLAGGVQRINEVTADLIRFSDSQGAQEIVTVAPDVIAG
MLBr_01544|M.leprae_Br4923 -------QQYSLVLADGVETVSPLVAQIMQNAGKPGNTKLITVAPSVLVK
. ** *:: :. :.*:::: . ::.. :
Mb3480c|M.bovis_AF2122/97 APIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPG---AARVAF
Rv3450c|M.tuberculosis_H37Rv APIVNTLPVSAFPDRPPTPVDGSPGRAVTTLCVTWTPAQPG---AARVAF
MMAR_1099|M.marinum_M APIVETLPVTGYPDTMSEPLDAG----ATTLCLSWVSGHAS---RPDVAF
MUL_0857|M.ulcerans_Agy99 APIVETLPVTGYPDTVSEPLDAG----VTTLCLSWVSRHAS---RPDVAF
MAV_4392|M.avium_104 APVVAALPVAGFPDRAPAVSEPA-----ATICAGWGDARS-------VAF
Mflv_4962|M.gilvum_PYR-GCK LPVVTSLPVATYPDRADVTTASV-------VCATWAPTAGGH--GSRTEL
Mvan_1444|M.vanbaalenii_PYR-1 VPVVTTLPVTTFPDRGGVTAAPV-------ICAHWNQKNGET--TSHTSV
MSMEG_1534|M.smegmatis_MC2_155 VPHVETVAIPAVP-HGLSQRTRV-------LCAAWDPR------GNQTAL
TH_4296|M.thermoresistible__bu VPAVDHLRVATFPDRIETRSAPV-------LCVQWDGADG----SPRTSL
MAB_3759c|M.abscessus_ATCC_199 HPSLNLLAVQTFPDRAGKIVDVP---EKSVLCSSWKPGQEKTQEHASTKL
MLBr_01544|M.leprae_Br4923 MPVVNKLDLSVYPDTPLQVVDLR---ENPSTCWWWERTAGES--RSRIQV
* : : : * * * .
Mb3480c|M.bovis_AF2122/97 LAGSGPPVPLGGVP--VTLAQADGRGPALDAVYLPPGRSAYVAARSLSGG
Rv3450c|M.tuberculosis_H37Rv LAGSGPPVPLGGVP--VTLAQADGRGPALDAVYLPPGRSAYVAARSLSGG
MMAR_1099|M.marinum_M LAGDGLPVPAGARA--LPLVQADGRGPALDAVYLPPGRSAYVTSRGLSGS
MUL_0857|M.ulcerans_Agy99 LAGDGLPVPAGARA--LPLVQADGRGPALDAVYLPPGRSAYVTSRGLSGS
MAV_4392|M.avium_104 LTGAAVPVPPGRAP--VTLAQADGRGPALDAVYLPPGRSAYVRA------
Mflv_4962|M.gilvum_PYR-GCK LTGPK--LPPAPRP--IVVAPGR-------EVAVPPGRSLYVRAVGLTGG
Mvan_1444|M.vanbaalenii_PYR-1 LVADS--APRRTRP--VTLVQTDGDGPAVDAVSVPAGRSVYVRSVSLTGA
MSMEG_1534|M.smegmatis_MC2_155 LFGEA--VGGAT----LELAQSDSAGPNIDNIGVPAGRSVLVEATGLAGG
TH_4296|M.thermoresistible__bu LLRDS--APDGAR---VVLAQADGSGPAVDAVGMPGGRYAFVRATGLTGD
MAB_3759c|M.abscessus_ATCC_199 LMGSSLPLKTDQVP--VVLAQADKEGPNLDTAYIPPARSAFVRSTGLGGD
MLBr_01544|M.leprae_Br4923 ITGSTIPINSADVKKVVSLVKADTTGREADQVYFGSNYANFVAVTGNNPA
: : :. . *
Mb3480c|M.bovis_AF2122/97 GT--GTRYLVTDTGVRFAIHD-DDVAHDLGLPTAAIPAPWPVLATLPSGP
Rv3450c|M.tuberculosis_H37Rv GT--GTRYLVTDTGVRFAIHD-DDVAHDLGLPTAAIPAPWPVLATLPSGP
MMAR_1099|M.marinum_M GAPLGRRYLVTDAGVRYLIRD-EDTARHLGLLTP-TAAPWPMLATLPEGP
MUL_0857|M.ulcerans_Agy99 GAPLGRRYLVTDAGVRYLIHD-EDTARHLGLLTP-TAAPWPMLATLPEGP
MAV_4392|M.avium_104 GANAGTRYLITDTGVRFAVPD-DDAAADLGLGQP-SPAPWPLLTLLPAGP
Mflv_4962|M.gilvum_PYR-GCK DHSGGLLFLVTDAAIMFGIRD-ADAAAALGLVGAGVPAPWPVLATVPRGP
Mvan_1444|M.vanbaalenii_PYR-1 GHGTGSLFLVTDAGVLFGVRD-DESAAALGLTAPAVPAPWPVLATLPRGP
MSMEG_1534|M.smegmatis_MC2_155 ---RGPLYLLTDHGVLHGIQD-ADAARHLGLTGPAVPAPWAMLAMLPRGP
TH_4296|M.thermoresistible__bu GGIAGSLFLLTDSGVVFGVHD-EEAAQWLGLPADARPAPWPMLARLPRGP
MAB_3759c|M.abscessus_ATCC_199 TGRAESLYLILDTGVRFGIGN-LEAAKALGLNVEPVPAPWPIVGLLPPGP
MLBr_01544|M.leprae_Br4923 AQTTESLWWVTRTGARFGVEDTKDVRDALGLNGTPNLAPWVALRLLSQGP
: : . . : : : *** *** : :. **
Mb3480c|M.bovis_AF2122/97 ELSRANASVARDTVAPGP-------------------------
Rv3450c|M.tuberculosis_H37Rv ELSRANASVARDTVAPGP-------------------------
MMAR_1099|M.marinum_M ELSGANASVAYDVVAVDPPVPAPGPATECPGGQCRQQPHQADR
MUL_0857|M.ulcerans_Agy99 ELSGASASVAYDVVAVDPPVPAPGPATECPGGQCPQQPHQADR
MAV_4392|M.avium_104 ELSRPNASVARDTVAGAP-------------------------
Mflv_4962|M.gilvum_PYR-GCK ELSRDAATGR---------------------------------
Mvan_1444|M.vanbaalenii_PYR-1 ELGRDDASVLRDGTGAP--------------------------
MSMEG_1534|M.smegmatis_MC2_155 ELSSAAASVARDALPSTS-------------------------
TH_4296|M.thermoresistible__bu ELGAQAASVSRDGAPPA--------------------------
MAB_3759c|M.abscessus_ATCC_199 RLSKEDALVVHDGMPPDKTGLAINPSTSATQAPS---------
MLBr_01544|M.leprae_Br4923 TLSRADALMEHDTLPMDMTPAELVVPK----------------
*. *