For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4198 | - | - | 100% (293) | putative oxidoreductase, short chain dehydrogenase/reductase family protein |
| M. thermoresistible (build 8) | TH_3887 | - | 8e-53 | 46.59% (249) | PUTATIVE short chain dehydrogenase |
| M. thermoresistible (build 8) | TH_3743 | - | 1e-48 | 42.35% (281) | PUTATIVE oxidoreductase, short chain dehydrogenase/reductase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3532c | fabG | 2e-48 | 41.84% (282) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. gilvum PYR-GCK | Mflv_1553 | fabG | 3e-48 | 40.64% (283) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. tuberculosis H37Rv | Rv3502c | fabG | 2e-48 | 41.84% (282) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. leprae Br4923 | MLBr_02565 | fabG | 1e-25 | 38.19% (199) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. abscessus ATCC 19977 | MAB_0608 | - | 1e-49 | 47.01% (234) | short chain dehydrogenase |
| M. marinum M | MMAR_5036 | - | 2e-48 | 44.98% (249) | short-chain type dehydrogenase/reductase |
| M. avium 104 | MAV_0654 | fabG | 4e-49 | 41.28% (281) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. smegmatis MC2 155 | MSMEG_5999 | - | 1e-49 | 44.22% (251) | short chain dehydrogenase |
| M. ulcerans Agy99 | MUL_4110 | - | 6e-48 | 44.58% (249) | short chain dehydrogenase |
| M. vanbaalenii PYR-1 | Mvan_2341 | - | 3e-47 | 41.79% (280) | short chain dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_5036|M.marinum_M --------------------------------------------------
MUL_4110|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_5999|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0608|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_2341|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb3532c|M.bovis_AF2122/97 --------------------------------------------------
Rv3502c|M.tuberculosis_H37Rv --------------------------------------------------
MAV_0654|M.avium_104 --------------------------------------------------
Mflv_1553|M.gilvum_PYR-GCK --------------------------------------------------
TH_4198|M.thermoresistible__bu --------------------------------------------------
MLBr_02565|M.leprae_Br4923 MAPKCSSDLFSQIVSSGPGSFVAKQLGVPRPETLRRYRPSDAPLCGSLLI
MMAR_5036|M.marinum_M --------------------------------------------------
MUL_4110|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_5999|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0608|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_2341|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb3532c|M.bovis_AF2122/97 --------------------------------------------------
Rv3502c|M.tuberculosis_H37Rv --------------------------------------------------
MAV_0654|M.avium_104 --------------------------------------------------
Mflv_1553|M.gilvum_PYR-GCK --------------------------------------------------
TH_4198|M.thermoresistible__bu --------------------------------------------------
MLBr_02565|M.leprae_Br4923 GGDGRLVEPLRATLEKDYDLVSNNLGGRWTDSFGGLVFDATGITAPAELK
MMAR_5036|M.marinum_M --------------------------------------------------
MUL_4110|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_5999|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0608|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_2341|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb3532c|M.bovis_AF2122/97 --------------------------------------------------
Rv3502c|M.tuberculosis_H37Rv --------------------------------------------------
MAV_0654|M.avium_104 --------------------------------------------------
Mflv_1553|M.gilvum_PYR-GCK --------------------------------------------------
TH_4198|M.thermoresistible__bu --------------------------------------------------
MLBr_02565|M.leprae_Br4923 GLHNFFTPLLRNLGRCARVVVIGTTPDATTSTDERIAQRALEGFSRSLGK
MMAR_5036|M.marinum_M --------------------------------------------------
MUL_4110|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_5999|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0608|M.abscessus_ATCC_1997 --------------------------------------------------
Mvan_2341|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb3532c|M.bovis_AF2122/97 -------------------------------------------MKLTESN
Rv3502c|M.tuberculosis_H37Rv -------------------------------------------MKLTESN
MAV_0654|M.avium_104 --------------------------------------------------
Mflv_1553|M.gilvum_PYR-GCK ---------------------------------------------MPDSA
TH_4198|M.thermoresistible__bu --------------------------------------------------
MLBr_02565|M.leprae_Br4923 ELRRGATVALVYLSPDAKPAATGLESTMRFILSAKSAYVNGQVFYVGAAD
MMAR_5036|M.marinum_M -------MGLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLD
MUL_4110|M.ulcerans_Agy99 -------MGLLDGRVVIVTGAGGGIGRAHALAFAVEGARVVVNDIGVGLD
MSMEG_5999|M.smegmatis_MC2_155 -------MGLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLD
MAB_0608|M.abscessus_ATCC_1997 ------MPGLLDGRVVIITGAGRGIGRAHALAFAAEGARVVVNDIGVGLD
Mvan_2341|M.vanbaalenii_PYR-1 ------MMGMLDGRVAVITGAGRGIGREHALLFAAQGAAVVVNDLGGSNT
Mb3532c|M.bovis_AF2122/97 RSPRTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALD
Rv3502c|M.tuberculosis_H37Rv RSPRTTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALD
MAV_0654|M.avium_104 ----------------MVTGAAAGLGRAEALGLARLGATVVVNDIATALD
Mflv_1553|M.gilvum_PYR-GCK SLRGTEN--DLSGRVAVVTGAAAGLGRAEAIGLAKAGATVVVNDMAAALD
TH_4198|M.thermoresistible__bu ----------------LVTGAGRGIGAAIAEGLAAEGATVMVSDAGVAVD
MLBr_02565|M.leprae_Br4923 STPPTNWDRPLENKVAIVTGAARGIGAAIAEVVARDGARVVAIDVES---
::***. *:* * .* ** *:. *
MMAR_5036|M.marinum_M GSPAGGGSAAHGVVDEITAA----GGEAVANGSDVSNWQQAADLISTAVD
MUL_4110|M.ulcerans_Agy99 GSPAGGGSAAHGVVDEITAA----GGEAVANGSDVSNWQQAADLISTAVD
MSMEG_5999|M.smegmatis_MC2_155 GSPASGGSAAQTVVDEIVAA----GGEAVANGSNVADWAQAESLVQTAVD
MAB_0608|M.abscessus_ATCC_1997 GS--AGISPAQEVVEEITAA----GGEAVTNGDDVADWSGAKNLIDTAVN
Mvan_2341|M.vanbaalenii_PYR-1 GEG-ADAGPAHEVVAEITAN----GGRAVANTDSVADWDGAKRVVQQAID
Mb3532c|M.bovis_AF2122/97 AS---------DVVDEIGAAAADAGAKAVAVAGDISQRATADELLASAVG
Rv3502c|M.tuberculosis_H37Rv AS---------DVVDEIGAAAADAGAKAVAVAGDISQRATADELLASAVG
MAV_0654|M.avium_104 AS---------DVIDEINAA----GSKAVAVAGDISERATADELVAQADG
Mflv_1553|M.gilvum_PYR-GCK KS---------DVLDEISSA----GSKGVAVAGDISQRSTADELVETADG
TH_4198|M.thermoresistible__bu GTG-RDPGPAESVVAAINQQ----GGKAFADVTDITDFAACEALIARAAD
MLBr_02565|M.leprae_Br4923 ---------AAEALDETANR----VGGTTLSLDVTADDAVDKITEHLHDY
.: . ::
MMAR_5036|M.marinum_M TFGGLDVLVNNAGIVRDRMMANTSEEEFDAVIAVHLKGHFATMRHAASYW
MUL_4110|M.ulcerans_Agy99 TFGGLDVLVNNAGIVRDRMMANTSEEEFDAVIAVHLKGHFATMRHAASYW
MSMEG_5999|M.smegmatis_MC2_155 TFGGLDVLVNNAGIVRDRMFANTSEEEFDAVVAVHLKGHFATMKHAAAYW
MAB_0608|M.abscessus_ATCC_1997 SFGRLDVLVNNAGFLRDRMLANMSEEEWDAVIRVHLKGHFAPLRHAAAYW
Mvan_2341|M.vanbaalenii_PYR-1 EFGRLDVLVNNAGILRDAFIAGMAEDQWDAVINVHLKGHFAMLHHAAAYW
Mb3532c|M.bovis_AF2122/97 -LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYW
Rv3502c|M.tuberculosis_H37Rv -LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYW
MAV_0654|M.avium_104 -LGGLDIVVNNAGITRDRMLFNMSDEEWDLVIAVHLRGHFLLTRNAAAYW
Mflv_1553|M.gilvum_PYR-GCK -LGGLAIVVNNAGITRDRILFNMTDEEWDAVIAVHLRGHFLLTRNAATYW
TH_4198|M.thermoresistible__bu TLGGLDVVVNAAGILRDGMVFKMSEQDWDAVISVHLKGTFNVTRHAAAWW
MLBr_02565|M.leprae_Br4923 QGGHADILVNNAGITRDKLLANMDDCRWDAVLEVNLLAPQRLTEGLVGNG
* ::** **: ** :. : :* *: *:* . . .
MMAR_5036|M.marinum_M RGLSKAG--KAVDARIINTSSGAGLQG-SVGQANYSAAKAGIAALTLVGA
MUL_4110|M.ulcerans_Agy99 RGLSKVG--KAVDARIINTSSGAGLQG-SVGQANYSAAKAGIAALTLVGA
MSMEG_5999|M.smegmatis_MC2_155 RAKSKAG--ETVDARIINTSSGAGLQG-SVGQANYSAAKAGIAALTLVAA
MAB_0608|M.abscessus_ATCC_1997 RDEFKAG--NAVDARIINTSSAAGLQG-SVGQGNYAAAKAGIATLTLQAA
Mvan_2341|M.vanbaalenii_PYR-1 KEQSKAG--EQPTAAVINTASGSGVTLPNAGQANYGAAKAGIAALTLIAA
Mb3532c|M.bovis_AF2122/97 RDKAKDAEGGSVFGRLVNTSSEAGLVG-PVGQANYAAAKAGITALTLSAA
Rv3502c|M.tuberculosis_H37Rv RDKAKDAEGGSVFGRLVNTSSEAGLVG-PVGQANYAAAKAGITALTLSAA
MAV_0654|M.avium_104 RSRAKEA-GGRIFGRIVNTASEAGLVG-PVGQANYGAAKAGIISLTLTAA
Mflv_1553|M.gilvum_PYR-GCK RSKAKEG-DGTIYGRIINTSSEAGLSG-PVGQPNYGAAKAGITALTLSAA
TH_4198|M.thermoresistible__bu REN-RGG-----QYRLINFTSMSGLQG-APSQPNYAAAKMGIVGLTFSCA
MLBr_02565|M.leprae_Br4923 SISKGG--------RVIVLSSMAGIAG-NRGQTNYATAKAGVIGLTQALA
:: :* :*: .* **.:** *: ** *
MMAR_5036|M.marinum_M AEMGRYGVTVNAIAP-AARTRMTETV--FAEMMAKP-DEGFDAMAPENVS
MUL_4110|M.ulcerans_Agy99 AEMGRYGVTVNAIAP-AARTRMTETV--FAEMMAKP-DEGFDAMAPENVS
MSMEG_5999|M.smegmatis_MC2_155 AEMGRYGVTVNAIAP-SARTRMTETV--FADMMATQ-DQEFDAMAPENIS
MAB_0608|M.abscessus_ATCC_1997 AEMGRYGITVNAIAP-AARTRMTEAV--FAETMAKPEDGAFDAMAPENVS
Mvan_2341|M.vanbaalenii_PYR-1 EELERYGVRVNAIAP-IARTRLTLATPGMGALMAEPDDGELDLFAPANIS
Mb3532c|M.bovis_AF2122/97 RALGRYGVCANVICP-RARTAMTADV--FGAAPDVE-AGQIDPLSPQHVV
Rv3502c|M.tuberculosis_H37Rv RALGRYGVCANVICP-RARTAMTADV--FGAAPDVE-AGQIDPLSPQHVV
MAV_0654|M.avium_104 RALGRYGVCANAICP-RARTAMTADV--FGDAPEVP-AGGVDPLSPEHVV
Mflv_1553|M.gilvum_PYR-GCK RALERFGVRANAIAP-RARTAMTAGV--FGDAPELA-DGAVDPLSPEHVV
TH_4198|M.thermoresistible__bu NALRNYGVTSNAIAP-IAGTRMTQGIK-GGGSMDYS-DSNVR-LSPKNCV
MLBr_02565|M.leprae_Br4923 PGLAEKGITINAVAPGFIETQMTAAIPLATREVGRRLNSLLQGGLPVDVA
: . *: *.:.* * :* . * .
MMAR_5036|M.marinum_M PLVVWLASAEAGAVTGKVFEVEGGVIRVAEG-WAHGPEVDKGAKWDPAEL
MUL_4110|M.ulcerans_Agy99 PLVVWLASAEAGAVTGKVFEVEGGVIRVAEG-WAHGPEVDKGAKWDPAEL
MSMEG_5999|M.smegmatis_MC2_155 PIVVWLGSAEARDVTGKMFEVEGGKIRIAEG-WAHGPEIDKGARWDPAEL
MAB_0608|M.abscessus_ATCC_1997 PLVVWLGSPESREVTGKVFEVEAGIIRVAEG-WAHGPQVDKGARWDPSEL
Mvan_2341|M.vanbaalenii_PYR-1 PLVGYLAS-EKCPVTGKVYAVQGGAISLLQG-WQDVETIETDKVW---EL
Mb3532c|M.bovis_AF2122/97 SLVQFLASPAAAEVNGQVFIVYGPQVTLVSPPHMERRFSADGTSWDPTEL
Rv3502c|M.tuberculosis_H37Rv SLVQFLASPAAAEVNGQVFIVYGPQVTLVSPPHMERRFSADGTSWDPTEL
MAV_0654|M.avium_104 NLVTFLSSPAAAEVNGQVFIVYGPQVTLVAAPTAEHKFSAQGPAWDPAEL
Mflv_1553|M.gilvum_PYR-GCK NLVRFLASPASEGVNGQLFIVYGPTVTLIAAPTAERQFSADGDAWDPSAL
TH_4198|M.thermoresistible__bu PPVVYLASEQSDWLNRRVIFAGNGRISLMTNPVIEREIVSASGTWDIPTA
MLBr_02565|M.leprae_Br4923 ETIAYFAIPASNAVTGNVIRVCGQAMLGA---------------------
: ::. :. .: . :
MMAR_5036|M.marinum_M RLVVADLLAKSRPSVPVYGA-------
MUL_4110|M.ulcerans_Agy99 RLVVADLLAKSRPSVPVYGA-------
MSMEG_5999|M.smegmatis_MC2_155 GPVVADLLAKARPAVPVYGA-------
MAB_0608|M.abscessus_ATCC_1997 GPVVTDLLDKARTPVPVYGSQG-----
Mvan_2341|M.vanbaalenii_PYR-1 DDIAARLPGA-----------------
Mb3532c|M.bovis_AF2122/97 TATLRDYFAGRDPEQSFSATDLMRQ--
Rv3502c|M.tuberculosis_H37Rv TATLRDYFAGRDPEQSFSATDLMRQ--
MAV_0654|M.avium_104 SATLQDYFAGRDPEHNFSASALMEQ--
Mflv_1553|M.gilvum_PYR-GCK SGTLQGYFAERDPGRSFSAAMGLGDPV
TH_4198|M.thermoresistible__bu FAEIESSFKEAILWPNIFDKPPAK---
MLBr_02565|M.leprae_Br4923 ---------------------------