For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4065 | - | - | 100% (364) | putative conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3327 | - | 7e-91 | 50.14% (361) | protein of unknown function DUF893, YccS/YhfK |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_3570 | - | 1e-110 | 56.34% (355) | hypothetical protein MSMEG_3570 |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_3048 | - | 1e-94 | 48.13% (374) | protein of unknown function DUF893, YccS/YhfK |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3327|M.gilvum_PYR-GCK MIMG----LTVRSVLPDAAAALRSLAAVGVIAVIAALWGPPGSATSAVAV
Mvan_3048|M.vanbaalenii_PYR-1 MIKG----LVQRSAMPDPAAVLRSLACVAAVAVVAVQWGPQGSATAVVGA
TH_4065|M.thermoresistible__bu --------------------------------------------------
MSMEG_3570|M.smegmatis_MC2_155 MQTGGPAADALRLSTPDPGAVARSLVGALAMTTAALALASPPAAMWTLGA
Mflv_3327|M.gilvum_PYR-GCK AAVAGATAFQDSPRSRIPLVYLVSGLCGVAVLLGTAVSGLPVLFLLLCAL
Mvan_3048|M.vanbaalenii_PYR-1 AAVAGATALQDSPRGRVTVVLLVTAVAGLAVLLGALTSGFSPLFVAVATL
TH_4065|M.thermoresistible__bu --------------------------------------------------
MSMEG_3570|M.smegmatis_MC2_155 GVIAGAVALQRSPGGRVPLVVTASLEMAIVVALAVLTGSHDVVFVLAVAV
Mflv_3327|M.gilvum_PYR-GCK WCAGVAMLWAHGPNTGLIGAASGALMVAATSAG-TPVSVGAA-LGTAALA
Mvan_3048|M.vanbaalenii_PYR-1 WCFGASMLWALGANPGLIGAASAALLVSAPPVTPTPTSV----VVTWLLA
TH_4065|M.thermoresistible__bu --------------------------------------------------
MSMEG_3570|M.smegmatis_MC2_155 WCFAAGMQWSVGANAGLIASAASSLLVIAPPDGYATAPTAFDGLLAPLLV
Mflv_3327|M.gilvum_PYR-GCK VVGGLSQAVVLAVWPPQRWRAQRDAVVAAYRSLAADARRLADGRDDG-WA
Mvan_3048|M.vanbaalenii_PYR-1 VAGGLLQVWVISLWPPLRWRNQRKALVAAYRSLAADARKISDGTVGGGPA
TH_4065|M.thermoresistible__bu --------------------------------------------------
MSMEG_3570|M.smegmatis_MC2_155 FGAGVLQAVLIATLPPHRWRVQREGLTRAYRSLATDARNVAADRSAD---
Mflv_3327|M.gilvum_PYR-GCK VDTEPLVALREAFTDVSGPTLRRPAVYRGWYALPERIAATLTDM----AN
Mvan_3048|M.vanbaalenii_PYR-1 ADPEPLAALRTAFTAADGPSRRRPATYRGWYALPERIADTLTDV----AR
TH_4065|M.thermoresistible__bu --------------------------------------------------
MSMEG_3570|M.smegmatis_MC2_155 VDDAPLTWLREVFADS--EAAQRSRANYGGYQVPERIAVTLAELRSAYAE
Mflv_3327|M.gilvum_PYR-GCK GP-RSEALSRVLEEAADTMAAVADTSRAGRVGTHVSIGRFDSVVTEIDGP
Mvan_3048|M.vanbaalenii_PYR-1 LPARSDALALALAEAADTLAAVADTSRTGRVGADVAIGRFDSVAATVDGS
TH_4065|M.thermoresistible__bu ------------------------------------------XAAQVS--
MSMEG_3570|M.smegmatis_MC2_155 PASDAPGVPRLLAAAAALLDAIADQGHTARRDAEHALVRVDSAVASVDGP
.: :.
Mflv_3327|M.gilvum_PYR-GCK ESGTVRRLSALLHEVAAMRLGDFVPSTPDAVRLRRPELPTSVRSAMDTVR
Mvan_3048|M.vanbaalenii_PYR-1 ESVVVQKLSTQLHEAVAMRLGDFVPSTPDAVRLRRPELRTSVRSAVDVMR
TH_4065|M.thermoresistible__bu -------------DAVALRFG----------RLHR----RTPGDVLAAVQ
MSMEG_3570|M.smegmatis_MC2_155 EKALAQRLGDLLREAAVLRFG----------QLHRPDLIGSLASAPSVVR
:...:*:* :*:* : .. .::
Mflv_3327|M.gilvum_PYR-GCK GHLNQDSPVLRHAVRVGAAVGLGGGIAQYAGIPYGYWIPLTALLVLRPET
Mvan_3048|M.vanbaalenii_PYR-1 SHLDRHSPVLRHAVRLAAAVAVGCVVDRYAEGAYGFWIPLTVLMVLRPET
TH_4065|M.thermoresistible__bu AQLTWPSPVLRHALRLAVGTAGAIALARYGDLDQGHWMALTVLLVLRPET
MSMEG_3570|M.smegmatis_MC2_155 SHLRWTSPILRHAVRLSAATALAAVAARFGGVEHGHWIALTVLVVLRPET
.:* **:****:*:..... . ::. *.*:.**.*:******
Mflv_3327|M.gilvum_PYR-GCK AHTYTRCVGRVAGTAAGVVVASAVLVPFAPAPVVSLGFAVVAVGIAYLVS
Mvan_3048|M.vanbaalenii_PYR-1 AHTYTRCVGRVAGTLVGIVTASAVLVILNPGVAVSAVLALAAVGVACVLS
TH_4065|M.thermoresistible__bu AHTYTRCGGRILGLATGVAVATVPIVLWRPDGLVAATVAALLVAATYLAL
MSMEG_3570|M.smegmatis_MC2_155 AHTYTRCAGRIATLAAGVTVASGLTLMWQPEALPAAACALALVALAYWLS
******* **: .*:..*: : * : * *. :
Mflv_3327|M.gilvum_PYR-GCK GVGYIAMSGAVAAAAVFLLDVARAGTPSSLTDPLIATIAGGALAVIAHVA
Mvan_3048|M.vanbaalenii_PYR-1 GIGFIAMAAAVTAAAVFLVDIGRPDMPPAVADPVLAVLFGGALALIAHVV
TH_4065|M.thermoresistible__bu RYGFIAVNVALGAALMFVLAIGDTGLPATFTGPVFAVVLGGAVAIMAHVA
MSMEG_3570|M.smegmatis_MC2_155 RFGYLAVGVPLGAALMFFLGVGGAAEWSGLADRLVEILIGGGLAVMAHVA
*::*: .: ** :*.: :. . . .:. :. : **.:*::***.
Mflv_3327|M.gilvum_PYR-GCK LPDDELTRLAQRAGELLKTEIDYAATVIKGYVHERENATEEMTAAWQRVS
Mvan_3048|M.vanbaalenii_PYR-1 LPDDALTRLSQRAGELLRTEIDYAATVIKAYVHELDDPAETMTSAWQRAF
TH_4065|M.thermoresistible__bu LPDDGLVRLRQRAGELLKTEIDYAALVVKAFVHGVDRPNEVLAAVWQRAF
MSMEG_3570|M.smegmatis_MC2_155 LPDHALIRLRQRAGELLMTEIDYAAMVVRAFVHEIDHPAEALSAAWQRAF
***. * ** ******* ******* *::.:** : . * :::.***.
Mflv_3327|M.gilvum_PYR-GCK RARSAFEATTGAMRLESRDFRLWLRSYRTAINSLTSSCTTLEAHMPTRPA
Mvan_3048|M.vanbaalenii_PYR-1 RARAAFEATTGAMRMESRELRHWLRSYRTALNAVTSSCTTLEDQLPAQPA
TH_4065|M.thermoresistible__bu RARAAFEAASGMTRVDSRELRRWLRTFRAAVNAVTGACVALETNLPDQPS
MSMEG_3570|M.smegmatis_MC2_155 RARAAFEAAWGAARLDSPTLRRWLRSYRTALNSVTSACTTLENNLPTHPS
***:****: * *::* :* ***::*:*:*::*.:*.:** ::* :*:
Mflv_3327|M.gilvum_PYR-GCK G-VDREFAITVDEFVEALCGDPPTAASPWTVDAAELEAAAQRLREAAPRE
Mvan_3048|M.vanbaalenii_PYR-1 VTANREFVLAVDEYVEALRGDPPTAASPWRVDCAELAAAEARLREAVRRH
TH_4065|M.thermoresistible__bu AKLDREFVAAVDEYIDALRGSPPNPAAAWTVDTAALTAADQKVREVAGRL
MSMEG_3570|M.smegmatis_MC2_155 SALHPDFQAAVDDYVTALRGAPPSPAVPWSLDTGELAAALRRVQEVASTL
. :* :**::: ** * **..* .* :* . * ** :::*..
Mflv_3327|M.gilvum_PYR-GCK RAEDGSSRVLVAEATAITRSLTAVAISPVPISAR--
Mvan_3048|M.vanbaalenii_PYR-1 GPEEGPARLLVAEVDTITRHVSAISVSPSPTSVR--
TH_4065|M.thermoresistible__bu PRDDRAARVLVAELGTITRSLLAVAATREPTSAG--
MSMEG_3570|M.smegmatis_MC2_155 AADNGAARILVGELSTITRSLIGISIDRVTPAGESS
:: .:*:**.* :*** : .:: . :