For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3942 | - | - | 100% (307) | - |
| M. thermoresistible (build 8) | TH_3189 | - | 1e-12 | 24.38% (324) | PUTATIVE periplasmic binding protein |
| M. thermoresistible (build 8) | TH_3573 | - | 3e-06 | 27.37% (285) | PUTATIVE putative periplasmic binding protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3070 | fecB | 4e-05 | 22.78% (281) | FEIII-dicitrate-binding periplasmic lipoprotein |
| M. gilvum PYR-GCK | Mflv_3882 | - | 6e-12 | 25.84% (267) | periplasmic binding protein |
| M. tuberculosis H37Rv | Rv3044 | fecB | 4e-05 | 22.78% (281) | FEIII-dicitrate-binding periplasmic lipoprotein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1650 | fecB | 1e-06 | 23.91% (276) | FEIII-dicitrate-binding periplasmic lipoprotein FecB |
| M. avium 104 | MAV_3910 | - | 1e-05 | 22.48% (258) | periplasmic binding protein |
| M. smegmatis MC2 155 | MSMEG_4560 | - | 5e-12 | 22.71% (295) | periplasmic binding protein |
| M. ulcerans Agy99 | MUL_1886 | fecB | 6e-07 | 23.91% (276) | FEIII-dicitrate-binding periplasmic lipoprotein FecB |
| M. vanbaalenii PYR-1 | Mvan_2081 | - | 3e-05 | 25.00% (272) | periplasmic binding protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3070|M.bovis_AF2122/97 -------------MRSTVAVAVAAAVIAASSGCGS---DQPAHKASQSMI
Rv3044|M.tuberculosis_H37Rv -------------MRSTVAVAVAAAVIAASSGCGS---DQPAHKASQSMI
MMAR_1650|M.marinum_M MQFG--------RMRLGLVAVSLSVAIVMCSGCGS---NQPATKASRSVT
MUL_1886|M.ulcerans_Agy99 MQFG--------RMRLGLVAVSLSVAIVVCSGCGS---NQPATKASRSVA
MAV_3910|M.avium_104 ------------MIRPARLAAVTAALVVACGGCGS---DRPAATTTRSLV
Mvan_2081|M.vanbaalenii_PYR-1 MLFTGARADHRWSRSAGLAAVGVAVAVFAFTGCGSSGNDTADGPGQRAVE
Mflv_3882|M.gilvum_PYR-GCK ------------MMPSRRCLSSVAAVMAALVSLTGCAASAPPESGATSAV
MSMEG_4560|M.smegmatis_MC2_155 --------------MIRRLCAGAAVLVVVTAGCGRPAAPVAVSAGAHGYP
TH_3942|M.thermoresistible__bu --------------MFQQEGQDSVNTLRRLALLLIALLPLAVATACGSSP
: . .
Mb3070|M.bovis_AF2122/97 TPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAA--GVSP--
Rv3044|M.tuberculosis_H37Rv TPTTQIAGAGVLGNDRKPDESCARAAAAADPGPPTRPAHNAA--GVSP--
MMAR_1650|M.marinum_M TPTTQIAGAGVLGNDRKADESCAREAAAPDPGPATRPAHNAA--GVTP--
MUL_1886|M.ulcerans_Agy99 TPTTQIAGAGVLGNDRKADESCAREAAAPDPGPATRPAHNAA--GVTP--
MAV_3910|M.avium_104 TPTTQIAGAGVLGNDRRPDESCARDAAEADPGPAKRQVHNAP--GGDP--
Mvan_2081|M.vanbaalenii_PYR-1 TSTTRIASAGVLGNDRRPDESCAPEPARLDDGPPDREVRNATGHGVSPPI
Mflv_3882|M.gilvum_PYR-GCK VSVDNCGEQIRLEAPPQRAVGYFQQSVELMLALGLGESVVATVYPDNP--
MSMEG_4560|M.smegmatis_MC2_155 VTVDNCGRQVVVDASPRRAVSLNQGSTEVMLSLGLADRMVGTATWTDP--
TH_3942|M.thermoresistible__bu DSDSGAAGS------PQRIISLSPSATETLWAIGAGEQVIAVD-------
. . : . .. . .
Mb3070|M.bovis_AF2122/97 -EMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLG
Rv3044|M.tuberculosis_H37Rv -EMVQVPAEAQRIVVLSGDQLDALCALGLQSRIVAAALPNSSSSQPSYLG
MMAR_1650|M.marinum_M -DVAQISAEPQRIVVLSGDQLDALCALGLQSRVVGAAFPDGSNSQPSYLG
MUL_1886|M.ulcerans_Agy99 -DVAQISAEPQRIVVLSGDQLDALCALGLQSRVVGAAFPDGSNSQPSYLG
MAV_3910|M.avium_104 -APVQVSADPRRIVVLAGDQLDALCALGLQSRVVGAALPDGASGQPAYLG
Mvan_2081|M.vanbaalenii_PYR-1 PELTQVRADPQRIVVLSGDHLDALCALGLQSRIVGAALPEGSDAQPAYLG
Mflv_3882|M.gilvum_PYR-GCK -PLPRYAEAYRSIPQLSNKDASFEQVLSAAPDFVYGGYASAFDDTAGRSR
MSMEG_4560|M.smegmatis_MC2_155 -VRDDLAEDNARVPVLAVNKPSLETVLDAEPDFVSASFGGTLGPGGVADR
TH_3942|M.thermoresistible__bu -GQSNFPPEVPTQDDLSGYTPNVEAIIGYEPDLVIT------ADAPDELV
*: . :. . .*
Mb3070|M.bovis_AF2122/97 TTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVF
Rv3044|M.tuberculosis_H37Rv TTVHDLPGVGTRSAPDLRAIAAAHPDLILGSQGLTPQLYPQLAAIAPTVF
MMAR_1650|M.marinum_M TAVHDLPGVGSRTAPDLKAIDAAHPDLILGSEALTPNLYAQLAAIAPTVF
MUL_1886|M.ulcerans_Agy99 TAVHDLPGVGSRTAPDLKAIDAAHPDLILGSEALTPNLYAQLAAIAPTVF
MAV_3910|M.avium_104 GAVRGVPGVGSRSHPDVKAIAAAHPDLILGSQGLTPALYPQLAAIAPTVF
Mvan_2081|M.vanbaalenii_PYR-1 TVIHELPGAGSRTDPDLDAIRAAQPDLILGSVALTPQDHPELAAIAPTVF
Mflv_3882|M.gilvum_PYR-GCK RAFHDAGVATYLNPEYCA-----------TEPITMDDVHTEIRTIAAIFG
MSMEG_4560|M.smegmatis_MC2_155 NRFEALGVPTYLAPSDCEGKTSVNGDGARTEPFTMDAIYTEITDLAAIFD
TH_3942|M.thermoresistible__bu SGLEAAGIELLSQP----------------APSTLDEAYAQIEQIGAATG
.. :.:: :..
Mb3070|M.bovis_AF2122/97 TAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQA
Rv3044|M.tuberculosis_H37Rv TAAPGADWENNLRGVGAATARIAAVDALITGFAEHATQVGTKHDATHFQA
MMAR_1650|M.marinum_M TAAPGAAWEDNLRGVGAATARSAAVEELLSGFTQRARQVGTKHDATHFQA
MUL_1886|M.ulcerans_Agy99 TAAPGAAWEDNLRGVGAATARSAAVEELLSGFTQRARQVGTKHDATHFQA
MAV_3910|M.avium_104 TAAPGAAWRDNLRAVGAATARAGAVDGLLSGFSQRAGDVGARHDASHFQA
Mvan_2081|M.vanbaalenii_PYR-1 TGPAGSAWRDNLRTVGAATGRAAAADGLIEDFDRAADRTGLDNDAAHFQA
Mflv_3882|M.gilvum_PYR-GCK VPERADALIEEMR------DRVAAAAAAVDGVRTAKIFVYDSGEDTAFTA
MSMEG_4560|M.smegmatis_MC2_155 VHERGAELVGDLR------RRMDSVSGTRTDVDMAFWFSDVR---APYFA
TH_3942|M.thermoresistible__bu RIGDAAELVAQMR---------ERIADVVDNTPATDLTYYHELDPTLFSA
. ::* . : : *
Mb3070|M.bovis_AF2122/97 SIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAAD
Rv3044|M.tuberculosis_H37Rv SIVQLTANTMRVYGANNFPASVLSAVGVDRPPSQRFTDKAYIEIGTTAAD
MMAR_1650|M.marinum_M SIVQLTRDSMRIYGSRNFAASVLAAVGVDRPASQRFTDKPYLEMGTTDAE
MUL_1886|M.ulcerans_Agy99 SIVQLTRDSMRIYGSRNFAASVLAAVGVDRPASQRFTDKPYLEMGTTDAE
MAV_3910|M.avium_104 SIVQLTTGSIRVFGANNFPASVLGAVGVDRPAAQRFTDKPYLEIGATDAD
Mvan_2081|M.vanbaalenii_PYR-1 SVVQFTDTTMRVFGPDSFPGSVLAAVGVDRPAAQRFTDKPYVEVGISDED
Mflv_3882|M.gilvum_PYR-GCK GRQGIGNQIIELAGGTNIFG----------DVEDTFADVSWEQVVQRNPD
MSMEG_4560|M.smegmatis_MC2_155 GCCGASGVIADAVGARNVFD----------DTTDEWPQVSWESVAERDPD
TH_3942|M.thermoresistible__bu AGSSFIGEVYGLFGLRNIADEVG-----DGVAADAYPQLSEEFIVTANPD
. * .. : :.: . : :
Mb3070|M.bovis_AF2122/97 LAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFV
Rv3044|M.tuberculosis_H37Rv LAKSPDFSAADADIVYLSCASEAAAERAAVILDSDPWRKLSANRDNRVFV
MMAR_1650|M.marinum_M LAKGPDFSAADADIIYVSCASPAAAERAATVLDSGPWRKLSANHDNRVLI
MUL_1886|M.ulcerans_Agy99 LAKGPDFSAADADIIYVSCASPAAAERAATVLDSGPWRKLSANHDSRVLI
MAV_3910|M.avium_104 LAKNPDLSVADADVVYLSCATPAAADRAATVLDSGPWRKLSANRDNRVYV
Mvan_2081|M.vanbaalenii_PYR-1 LGNSPDFSIADGDLVYVSFATAEARERAPKVLDSDAWRRLSANRDGRVFA
Mflv_3882|M.gilvum_PYR-GCK VIVIYDYFG-----------TPSVEDKWAFLRSRPELAGVPAIRDDRYAV
MSMEG_4560|M.smegmatis_MC2_155 VLVLADLSRR-------TIEGDSLQTKIAFLESNPVTRRLTAVQQRRYIV
TH_3942|M.thermoresistible__bu LIFLADVQCCG--------------VTAASVANRAGWAEVAAVREGRIYE
: * . : . :.* :: *
Mb3070|M.bovis_AF2122/97 VN-DQVWQTG-EGMVAARGIVDDLRWVDAPIN--
Rv3044|M.tuberculosis_H37Rv VN-DQVWQTG-EGMVAARGIVDDLRWVDAPIN--
MMAR_1650|M.marinum_M VN-DEIWQTG-EGLVAARGIVDDLRWVNAPIN--
MUL_1886|M.ulcerans_Agy99 IN-DEIWQTG-EGLVAARGIVDDLRWVNAPIN--
MAV_3910|M.avium_104 VN-DEIWQTG-QGLIAARGIVDDLRLVNAPIN--
Mvan_2081|M.vanbaalenii_PYR-1 VN-NEVWQTG-EGIVAARGMLADLRWVNAPIN--
Mflv_3882|M.gilvum_PYR-GCK LTLQDAVLGV-RAPYAVETLARQVHPERFR----
MSMEG_4560|M.smegmatis_MC2_155 VNGADLNPSI-RTVDGVEKVARGLRELGLASDR-
TH_3942|M.thermoresistible__bu LDADIASRWGPRVVDMVEQIGSVLTEVEAVPAQN
: . .. : :