For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3757 | - | - | 100% (272) | carveol dehydrogenase |
| M. thermoresistible (build 8) | TH_3053 | - | 6e-81 | 57.93% (271) | PUTATIVE carveol dehydrogenase |
| M. thermoresistible (build 8) | TH_0123 | - | 3e-74 | 53.90% (269) | PROBABLE DEHYDROGENASE |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2771 | - | 1e-77 | 56.51% (269) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. gilvum PYR-GCK | Mflv_1589 | - | 3e-73 | 53.74% (281) | short-chain dehydrogenase/reductase SDR |
| M. tuberculosis H37Rv | Rv2750 | - | 1e-77 | 56.51% (269) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. leprae Br4923 | MLBr_01807 | fabG1 | 4e-24 | 34.69% (271) | 3-oxoacyl- |
| M. abscessus ATCC 19977 | MAB_3081 | - | 1e-79 | 56.25% (272) | Short-chain dehydrogenase/reductase |
| M. marinum M | MMAR_1965 | fabG | 6e-77 | 53.62% (276) | short chain dehydrogenase |
| M. avium 104 | MAV_3641 | - | 2e-77 | 54.78% (272) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. smegmatis MC2 155 | MSMEG_2687 | - | 2e-76 | 55.51% (272) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. ulcerans Agy99 | MUL_3392 | fabG | 5e-76 | 53.79% (277) | 3-ketoacyl-(acyl-carrier-protein) reductase |
| M. vanbaalenii PYR-1 | Mvan_2391 | - | 6e-74 | 53.60% (278) | 3-ketoacyl-(acyl-carrier-protein) reductase |
CLUSTAL 2.0.9 multiple sequence alignment
TH_3757|M.thermoresistible__bu ----MG-KLDGKVAFITGAARGQGRAHAVRLAEEGADVIAVDVCEQYAT-
Mflv_1589|M.gilvum_PYR-GCK ----MGGRVEGKVAFITGAARGQGRSHAVRLAEEGADIIAIDVCGPISTH
Mb2771|M.bovis_AF2122/97 --MIDR-PLEGKVAFITGAARGLGRAHAVRLAADGANIIAVDICEQIAS-
Rv2750|M.tuberculosis_H37Rv --MIDR-PLEGKVAFITGAARGLGRAHAVRLAADGANIIAVDICEQIAS-
MSMEG_2687|M.smegmatis_MC2_155 --MSDTAPLSGKVAFITGAARGQGRAEAVRLAADGADIIAVDLCAQIAS-
MAV_3641|M.avium_104 MPRSSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIAS-
MMAR_1965|M.marinum_M MSRPLDGPLSGRVAFITGAARGQGRAHALRLARDGADVIAVDLCDQIAS-
MUL_3392|M.ulcerans_Agy99 MSRPLDGPLSGRVAFITGAARGQGRAHALRLARDGADVIAVDLCDQIAS-
Mvan_2391|M.vanbaalenii_PYR-1 -----MGELTGKVAFITGAARGQGRAHAVKLASEGADIIALDLCAQIDS-
MAB_3081|M.abscessus_ATCC_1997 -----MGKLDGKVAFITGAARGQGRAHAIKLASEGASIIAVDICAQIPS-
MLBr_01807|M.leprae_Br4923 ---------MTDAAAKVSAAPGRG-----KPAFVSRSILVTGGNRGIGLA
.* ..** * * : * . .::. .
TH_3757|M.thermoresistible__bu VVYQMSRPEDLAETVRQVETLGRRIVAREVDVCDLAGLQKAFDDGAAQLG
Mflv_1589|M.gilvum_PYR-GCK TDIPPATPDDLAQTVDLVKGTGRRIVSEQVDVRDFAAVKAAVDSGVEQLG
Mb2771|M.bovis_AF2122/97 VPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLSVALQAGLDEFG
Rv2750|M.tuberculosis_H37Rv VPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLSVALQAGLDEFG
MSMEG_2687|M.smegmatis_MC2_155 VPYPLATPDDLATTAELVEKAGGRIVTRQADVRDEPELAAALAAGLDEFG
MAV_3641|M.avium_104 VPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDEFG
MMAR_1965|M.marinum_M VPYPLGTAEELATTVKLVEDTGARIVASQADVRDREALAAALQAGIDELG
MUL_3392|M.ulcerans_Agy99 VPYPLGTAEELATTVKLVEDTGARIVASQADVRDREALAAALQAGIDELG
Mvan_2391|M.vanbaalenii_PYR-1 VPYPLATPEDLAATAKLVEDAGARIVTYQADVRDRDAVKAAVRDGTGKLG
MAB_3081|M.abscessus_ATCC_1997 VEYPMATTEDLDLTVKEVDALGRAISAHETDVRDREALQAAFDAGVHDLG
MLBr_01807|M.leprae_Br4923 VARRLVADGHRVAVTHRASVVPDWFFGVECDVTDNDAIGAAFKAVEEHQG
. . .. .. : : ** * : *. . *
TH_3757|M.thermoresistible__bu -GVDIVVANAGIGPGGQTTD---DEQWDDVVNVNLKGVWNTLRVAVPTML
Mflv_1589|M.gilvum_PYR-GCK -RLDIVVANAGIGNGGQTLDHTSEEDWNDMIDVNLSGVWKSVKAAVPHLL
Mb2771|M.bovis_AF2122/97 -RLDIVVANAGIA---MMQ--AGDDGWRDVIDVNLTGVFHTVQVAIPTLI
Rv2750|M.tuberculosis_H37Rv -RLDIVVANAGIA---MMQ--AGDDGWRDVIDVNLTGVFHTVQVAIPTLI
MSMEG_2687|M.smegmatis_MC2_155 -RLDIVVANAGIA---PML--SGPEGWRDVIDVNLTGVHHTVEVAIPTLV
MAV_3641|M.avium_104 -RLDIVVANAGIA---PMS--AGDDGWHDVIDVNLTGVYHTIKVAIPALV
MMAR_1965|M.marinum_M -QVDIVVANAGIA---PMQ--SGDDGWRDVIDVNLSGAYYTVEVAIPTMI
MUL_3392|M.ulcerans_Agy99 -QVDIVVANAGIA---PMQ--SGDDGWRDVIDVNLSGAYYTVEVAIPTMI
Mvan_2391|M.vanbaalenii_PYR-1 DRLDIVVANAGIA---PMA--S-ADAWQDVIDVNLTGVYNTVDVAMKPMV
MAB_3081|M.abscessus_ATCC_1997 -PVDIVVANAGIA---TLTPECGDDGWRDVLDVNLTGVYHTIEVARPSMV
MLBr_01807|M.leprae_Br4923 -PVEVLVANAGITSDMLIMR-MSEEQFQKVIDVNLTGVFRVAKLASRNMI
::::****** : : .:::***.*. * ::
TH_3757|M.thermoresistible__bu TQDRGGSIILTSSTGGLIGTPVVSGGMIAYTAAKHGVIGIMRAYANYLAP
Mflv_1589|M.gilvum_PYR-GCK AGGNGGSIILTSSVGGLKPYPHTG----HYIAAKHGVIGLMRTFAVELGQ
Mb2771|M.bovis_AF2122/97 EQGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVVGLMRAYANHLAP
Rv2750|M.tuberculosis_H37Rv EQGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVVGLMRAYANHLAP
MSMEG_2687|M.smegmatis_MC2_155 EQGDGGAIVLISSVAGLVGIGGGDRGSLGYTAAKHGIVGLMRAYANHLAP
MAV_3641|M.avium_104 KQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAG
MMAR_1965|M.marinum_M EQGRGGSIVLISSAAGLVGISSADAGAIGYAASKHALVGLMRVYANLLAP
MUL_3392|M.ulcerans_Agy99 EQGRGGSIVLISSAAGLVGISSADAGAIGYVASKHALVGLMRVYANLLAP
Mvan_2391|M.vanbaalenii_PYR-1 KFGNGGSIVLTSSVAGLIGLGAPIAGSVGYAAAKHGIVGIMRVYANFLAQ
MAB_3081|M.abscessus_ATCC_1997 QRGAGGSIVLTSSVAGLTGMVMDNPGGLAYTAAKHGLVGLMRSYANMLAP
MLBr_01807|M.leprae_Br4923 KQRFG-RYIFMGSVVGLSGVPGQAN----YAASKSGLIGMARSLARELGS
* :: .* ** * *:* .::*: * * *.
TH_3757|M.thermoresistible__bu HHIRVNSVAPTTVATPMANNG--------DLSMLKKYEPAIARSLENAIP
Mflv_1589|M.gilvum_PYR-GCK HSIRVNAVCPTNVNTPLFMNEGTMKLFRPDLENPGPDDLAVAAQFMHVLP
Mb2771|M.bovis_AF2122/97 QNIRVNSVHPCGVDTPMINNE-----FFQQWLT--TADMDAPHNLGNALP
Rv2750|M.tuberculosis_H37Rv QNIRVNSVHPCGVDTPMINNE-----FFQQWLT--TADMDAPHNLGNALP
MSMEG_2687|M.smegmatis_MC2_155 HSIRVNSVHPTGVDTPMIDNE-----FTRGWLAHITEETGRPVDMGNALP
MAV_3641|M.avium_104 QMIRVNSIHPSGVETPMINNE-----FTREWLAKMAAATDTPGAMGNAMP
MMAR_1965|M.marinum_M HSIRVNSLHPSGVDTPMINNE-----FIRRWLADLVAETGSGPGAGNALP
MUL_3392|M.ulcerans_Agy99 HSIRVNSLHPSGVDPPMINNE-----FIRHWLADLVAETGSGPGAGNALP
Mvan_2391|M.vanbaalenii_PYR-1 YSIRVNSVHPAAVNTPMIDNE-----FTRSWLDGMAQQSEGGPDMGNALP
MAB_3081|M.abscessus_ATCC_1997 HNIRVNTIHPSGVATPMLINP-----VTEKLFAD--GSPEGMSDTGNALP
MLBr_01807|M.leprae_Br4923 RSITANVVAPGFIDTEMTRAM----------------DSKYQEAALQAIP
* .* : * : . : :.:*
TH_3757|M.thermoresistible__bu VDYVEA-RDIANAVAWLASDDARYVTGTVVPVDAGLLNKR
Mflv_1589|M.gilvum_PYR-GCK VGWVEP-RDISNAVLFLASDEARYVTGLPVTVDAGSMLK-
Mb2771|M.bovis_AF2122/97 VELVQP-TDIANAVAWLASEEARYVTGVTLPVDAGFVNKR
Rv2750|M.tuberculosis_H37Rv VELVQP-TDIANAVAWLASEEARYVTGVTLPVDAGFVNKR
MSMEG_2687|M.smegmatis_MC2_155 VQAIDA-DDVANAVAWLVSDQARYVTGVTLPVDAGIVNKR
MAV_3641|M.avium_104 VEVLAP-EDVANAVAWLVSDQARYITGVTLPVDAGFLNK-
MMAR_1965|M.marinum_M VQILQA-DDIAGALAWLVSDEARYITGVALPVDAGCVNKR
MUL_3392|M.ulcerans_Agy99 VQILQA-DDIAGALAWLVSDEARYITGVALPVDAGCVNKR
Mvan_2391|M.vanbaalenii_PYR-1 VSALEP-EDIANAVFWLVSDAARYVTGITLPVDAGYINKR
MAB_3081|M.abscessus_ATCC_1997 VVLMEP-EDMANTVAWLVSEDARYITGVALPVDAGFTNRR
MLBr_01807|M.leprae_Br4923 LGRIGAVEEIAGAVSFLASEDAGYISGAVIPVDGGLGMGH
: : . :::.:: :*.*: * *::* :.**.*