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aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_3342 | - | - | 100% (224) | transcriptional regulator, GntR family |
M. thermoresistible (build 8) | TH_0156 | - | 2e-33 | 35.85% (212) | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY |
M. thermoresistible (build 8) | TH_3038 | - | 3e-18 | 30.50% (200) | PUTATIVE putative transcriptional regulator, GntR family |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0170c | - | 5e-35 | 40.38% (213) | GntR family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_4366 | - | 4e-86 | 70.59% (221) | GntR family transcriptional regulator |
M. tuberculosis H37Rv | Rv0165c | - | 1e-27 | 41.83% (153) | GntR family transcriptional regulator |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4571 | - | 2e-38 | 40.93% (215) | GntR family transcriptional regulatory protein |
M. marinum M | MMAR_4029 | - | 2e-86 | 70.91% (220) | GntR family transcriptional regulator |
M. avium 104 | MAV_1576 | - | 3e-92 | 74.66% (221) | transcriptional regulator, GntR family protein |
M. smegmatis MC2 155 | MSMEG_2209 | - | 4e-87 | 70.59% (221) | transcriptional regulator, GntR family protein |
M. ulcerans Agy99 | MUL_3894 | - | 3e-85 | 70.00% (220) | GntR family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_1978 | - | 4e-90 | 71.49% (221) | GntR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4029|M.marinum_M -------------------------------------------------M MUL_3894|M.ulcerans_Agy99 -------------------------------------------------M MAV_1576|M.avium_104 -------------------------------------------------M TH_3342|M.thermoresistible__bu -------------------------------------------------V Mflv_4366|M.gilvum_PYR-GCK -------------------------------------------------M Mvan_1978|M.vanbaalenii_PYR-1 -------------------------------------------------M MSMEG_2209|M.smegmatis_MC2_155 -------------------------------------------------M Mb0170c|M.bovis_AF2122/97 MIKHDVVWVTLWPERPNNKPPPSPRQVPGNPGPTLKVLASHVNAPLSAKP Rv0165c|M.tuberculosis_H37Rv MIKHDVVWVTLWPERPNNKPPPSPRQVPGNPGPTLKVLASHVNAPLSAKP MAB_4571|M.abscessus_ATCC_1997 -----------------------------------------MNAPR-ART MMAR_4029|M.marinum_M TDPEFAARPQLSDDVARYVRKRIYEGNYAAGKYIRLDQLAAELGISVTPV MUL_3894|M.ulcerans_Agy99 TDPEFAARPQLSDDVARYVRKRIYEGNYAAGKYIRLDQLAAELGISVTPV MAV_1576|M.avium_104 SVPDFAARPQLSDDVAHLIRGRIFDGSYAAGSYVRLDQLAAELGISVTPV TH_3342|M.thermoresistible__bu AVPEFAARPQLAEDVARYVRRRIFDGTYAAGEYVRLDQLAVELGVSVTPV Mflv_4366|M.gilvum_PYR-GCK TTPEFAARPQLAEDVARFVRRRIFDGTYPAGRYIRLEQLAAELGISVTPV Mvan_1978|M.vanbaalenii_PYR-1 SIPEFAARPQLAEDVARFVRRRIFEGTYPAGQYIRLEQLADELGISVTPV MSMEG_2209|M.smegmatis_MC2_155 TVPDFAARPQLAEDVARLIRRRIFDGTYPAGKYIRLDQLAAELGISVTPV Mb0170c|M.bovis_AF2122/97 RSQLPLRRAQLSDEVAGHLRAAIMSGALRSGTFIRLDETAAELGVSVTPV Rv0165c|M.tuberculosis_H37Rv RSQLPLRRAQLSDEVAGHLRAAIMSGALRSGTFIRLDETAAELGVSVTPV MAB_4571|M.abscessus_ATCC_1997 R---EIRRPQLSEEVAGRLRAAIMTGDLRPGEYIRMDETAAQLGVSVTPV *.**:::** :* * * .* ::*::: * :**:***** MMAR_4029|M.marinum_M REALFALRAEGLVAQQPHRGFVVLPLTKRDLADVAYVQAHVGGELAARAA MUL_3894|M.ulcerans_Agy99 REALFALRAEGLVAQQPHRGFVVLPLTKRDLADVAYVQAHVGGELAARAA MAV_1576|M.avium_104 REALFALRAEGLISQQPRRGFVVLPVTRRDVTDVANVQAHVGGELAARAA TH_3342|M.thermoresistible__bu REALFQLRAEGLLVQQPRRGFMVLPVTERDLTDIANVQAHVGGELAARAA Mflv_4366|M.gilvum_PYR-GCK REALFGLRAEGLLTQQPRRGFVVSPITERDIADVSDVQAHIGGVLASRAA Mvan_1978|M.vanbaalenii_PYR-1 REALFGLRAEGLLTQQPRRGFVVLPITRRDIADVADVQAHIGGVLASRAA MSMEG_2209|M.smegmatis_MC2_155 REALFGLRTEGLLAQQPRRGFIVLPVTRRDIDDVAGVQAHIGGQLAARAA Mb0170c|M.bovis_AF2122/97 REALLKLRGEGMVGLEPHRGHVVLPLTRQDIDDIFWLQATIAQELATSAT Rv0165c|M.tuberculosis_H37Rv REALLKLRGEGMVGLEPHRGHVVLPLTRQDIDDIFWLQATIAQELATSAT MAB_4571|M.abscessus_ATCC_1997 REALLTLRGEGMVDAVPHRGYAVAALSRKDVEDIFALQSHLAVELAKAAA ****: ** **:: *:**. * .::.:*: *: :*: :. ** *: MMAR_4029|M.marinum_M INIGAAQLAELQQIQAQLEEAYAADDDERTVRLNHEFHRAINLAADSPRL MUL_3894|M.ulcerans_Agy99 INIGAAQLAELQQIQAQLEEAYAADDDERTVRLNHEFHRAINLAADSPRL MAV_1576|M.avium_104 VNITDDQLRELKQIQAQLEDAYAGDEHERTVRLNHEFHRAINIAADSPKL TH_3342|M.thermoresistible__bu QNITDEQLRVLTAIQDELEEAYTRDDEDRAVRLNHEFHRAINVAADSPKL Mflv_4366|M.gilvum_PYR-GCK ELITDEQLAELERIQDELEAAYDAVDHEAAVRLNHAFHRGVNIAAGSPKL Mvan_1978|M.vanbaalenii_PYR-1 ERITDEQLQALDHVQDQLEVAYHADDHEAAVRLNHEFHRGVNVAAGSPKL MSMEG_2209|M.smegmatis_MC2_155 GQITDAQLEELGRIQDELEQAYARDDHEAAVRLNHAFHRGVNRAAESPKL Mb0170c|M.bovis_AF2122/97 AHITDVEIDELDRINNALAGAIGSGDAKTIASIEFAFHRVFNKASRRIKL Rv0165c|M.tuberculosis_H37Rv AHITDVEIDELDRINNALAGAIGSGDAKTIASIEFAFHRVFNKASRRIKL MAB_4571|M.abscessus_ATCC_1997 ARITPEQADALAELNDALRNATSP---DQVIWAEFEFHRLLNHVADRPKL * : * :: * * . :. *** .* .: :* MMAR_4029|M.marinum_M SQLMSQITRYQPESVFPGIEHWPARAVKDHRRVLVALKKHDDKAARTAMS MUL_3894|M.ulcerans_Agy99 SQLMSQITRYQPESVFPGIEHWPARAVKDHGQVLVALKKHDDKAARTAMS MAV_1576|M.avium_104 AQLMSQITRYAPESVFPAIQGWPEQSMKDHRRILSALKKRDDKLARAAMS TH_3342|M.thermoresistible__bu AQVMSQITRYAPESVFPTISGWPARSTEHHRRVLAALADRDPDGARAAMS Mflv_4366|M.gilvum_PYR-GCK AQLMGQITRFALESVYPTVEGWPAHSMNDHRVLLAALRKRDGTAARDAMS Mvan_1978|M.vanbaalenii_PYR-1 AQLMGQITKFALESVYPTVEGWPAHSTRDHRELLAALKARDSEAARAAMS MSMEG_2209|M.smegmatis_MC2_155 AQLMSQITRYALESVYPTVEGWPEQSTHDHRRILDALGRHDGELARAAMA Mb0170c|M.bovis_AF2122/97 AWFLLNAARYMPAQVFAADPRWGADAVNSHRQLIAALRRRDTAAVIEHTV Rv0165c|M.tuberculosis_H37Rv AWFLLNAARYMGAGVRGRP----AMGRGRGEQSSAADRR---AAPPRHSR MAB_4571|M.abscessus_ATCC_1997 AWFLLQAVRYTPHQLFAEDASWIVPTTETHDKLIAALRAGDIAEVIAQTE : .: : .:: : * MMAR_4029|M.marinum_M EHLASSAVPLIDHLIARGVVAESAPSGSAAERARGG MUL_3894|M.ulcerans_Agy99 EHLASSAVPLIDHLIARGVVAESAPSGSAAERARGG MAV_1576|M.avium_104 EHLAAGAVPLIDHLVARGVVVD----GGGPDPG--- TH_3342|M.thermoresistible__bu EHLAAGAGPLIEHLKEHGVIAQ-------------- Mflv_4366|M.gilvum_PYR-GCK EHLCAAAGPLIDHLTTRGVIG--------------- Mvan_1978|M.vanbaalenii_PYR-1 EHLCAASGPLIEHLTRRGVIQ--------------- MSMEG_2209|M.smegmatis_MC2_155 DHLCAASKPLIDHLARLGVLE--------------- Mb0170c|M.bovis_AF2122/97 WQFTDGARRLTEALAETEVFG--------------- Rv0165c|M.tuberculosis_H37Rv R---NRAHRLAVHRWGTQADGGPG------------ MAB_4571|M.abscessus_ATCC_1997 VQFIDGARRLIEYLDRTGMWSQD------------- : *