For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3159 | - | - | 100% (149) | UspA domain protein |
| M. thermoresistible (build 8) | TH_1349 | - | 1e-08 | 31.58% (152) | IRON-REGULATED CONSERVED HYPOTHETICAL PROTEIN TB15.3 |
| M. thermoresistible (build 8) | TH_4471 | - | 7e-07 | 32.26% (155) | PUTATIVE putative universal stress protein family protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1662 | TB15.3 | 1e-05 | 27.78% (144) | hypothetical protein Mb1662 |
| M. gilvum PYR-GCK | Mflv_0416 | - | 2e-50 | 67.11% (149) | UspA domain-containing protein |
| M. tuberculosis H37Rv | Rv1636 | TB15.3 | 1e-05 | 27.78% (144) | hypothetical protein Rv1636 |
| M. leprae Br4923 | MLBr_01390 | - | 1e-05 | 29.45% (146) | hypothetical protein MLBr_01390 |
| M. abscessus ATCC 19977 | MAB_2312 | - | 6e-05 | 27.21% (147) | hypothetical protein MAB_2312 |
| M. marinum M | MMAR_0859 | - | 2e-16 | 36.24% (149) | universal stress protein UspA |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_0449 | - | 1e-15 | 35.17% (145) | transporter, major facilitator family protein, putative |
| M. ulcerans Agy99 | MUL_0611 | - | 1e-16 | 36.24% (149) | hypothetical protein MUL_0611 |
| M. vanbaalenii PYR-1 | Mvan_0255 | - | 2e-52 | 70.00% (150) | UspA domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1662|M.bovis_AF2122/97 --------------------------------------------------
Rv1636|M.tuberculosis_H37Rv --------------------------------------------------
MLBr_01390|M.leprae_Br4923 --------------------------------------------------
MAB_2312|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_0416|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0255|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_3159|M.thermoresistible__bu --------------------------------------------------
MMAR_0859|M.marinum_M --------------------------------------------------
MUL_0611|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_0449|M.smegmatis_MC2_155 MRQGPLAGRYPAVATMVTLALIPYLALSAAIDPLVPIICEQLHMTPQEMS
Mb1662|M.bovis_AF2122/97 --------------------------------------------------
Rv1636|M.tuberculosis_H37Rv --------------------------------------------------
MLBr_01390|M.leprae_Br4923 --------------------------------------------------
MAB_2312|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_0416|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0255|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_3159|M.thermoresistible__bu --------------------------------------------------
MMAR_0859|M.marinum_M --------------------------------------------------
MUL_0611|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_0449|M.smegmatis_MC2_155 LGSGLGNAAYAVGTVLAVQFAQHLPQRRMMIAYAVLLVIGSAVAASAPNG
Mb1662|M.bovis_AF2122/97 --------------------------------------------------
Rv1636|M.tuberculosis_H37Rv --------------------------------------------------
MLBr_01390|M.leprae_Br4923 --------------------------------------------------
MAB_2312|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_0416|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0255|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_3159|M.thermoresistible__bu --------------------------------------------------
MMAR_0859|M.marinum_M --------------------------------------------------
MUL_0611|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_0449|M.smegmatis_MC2_155 TVFIIGHVLQGLSTSMLLIAAAPPLTIGFPREKLRHTAVIMNMCVFGAVA
Mb1662|M.bovis_AF2122/97 --------------------------MSAYKTVVVGTDGSDSSMR-----
Rv1636|M.tuberculosis_H37Rv --------------------------MSAYKTVVVGTDGSDSSMR-----
MLBr_01390|M.leprae_Br4923 --------------------------MGAYQTVVVGTDGSDSSLR-----
MAB_2312|M.abscessus_ATCC_1997 --------------------------MSAYSTVVVGTDGSDSSYR-----
Mflv_0416|M.gilvum_PYR-GCK --------------------MTSPVPTDKKTVIVIAFDGSPTARR-----
Mvan_0255|M.vanbaalenii_PYR-1 --------------------MTGPEPRDKKSVLVIAFDGSPTARR-----
TH_3159|M.thermoresistible__bu --------------------------------MVIAYDGSRNARR-----
MMAR_0859|M.marinum_M ----------------------------MPVNAVVGYDGSPGAST-----
MUL_0611|M.ulcerans_Agy99 --------------MAGLVARDLSRRCTVPVNAVVGYDGSPGAST-----
MSMEG_0449|M.smegmatis_MC2_155 LGPFVGGTQAEAHAWRPLFWIIAAIALAALVMALLTFEDAPPADRTAPRD
:: :.: :
Mb1662|M.bovis_AF2122/97 -------AVDRAAQIAGAD------------------AKLIIASAYLPQH
Rv1636|M.tuberculosis_H37Rv -------AVDRAAQIAGAD------------------AKLIIASAYLPQH
MLBr_01390|M.leprae_Br4923 -------AVDRAGKIAGSD------------------AKLIIASAYLPQH
MAB_2312|M.abscessus_ATCC_1997 -------AVDRAGAIAGAAG-----------------AKLIVATAYFPE-
Mflv_0416|M.gilvum_PYR-GCK -------AVAYAARFLTAD-------------------RAVVLTAWTPLN
Mvan_0255|M.vanbaalenii_PYR-1 -------AVQYAGRFLTAD-------------------RAVVLTVWSPLD
TH_3159|M.thermoresistible__bu -------AVQYAGHFFAGR-------------------RAVVLTVWTPLE
MMAR_0859|M.marinum_M -------AIEAGALLFPGA-------------------RGWITYLWVPPF
MUL_0611|M.ulcerans_Agy99 -------AIEAGALLFPGA-------------------RGWITYLWVPPF
MSMEG_0449|M.smegmatis_MC2_155 IKAIALAAVGCAAAFIGAAQLTSHGFDDAAVTVPMLGGLLLIVTLIVYQF
*: .. : . :
Mb1662|M.bovis_AF2122/97 EDARAADILKDES-----------------YKVTGTAPIYEILHD-----
Rv1636|M.tuberculosis_H37Rv EDARAADILKDES-----------------YKVTGTAPIYEILHD-----
MLBr_01390|M.leprae_Br4923 DNARAFDILKDES-----------------YKVTGTAPIYEILHD-----
MAB_2312|M.abscessus_ATCC_1997 NNPHSADVLKDDA-----------------YKVTGKAPVYDILRT-----
Mflv_0416|M.gilvum_PYR-GCK RGTDPQDYDYDLDGPPDPRDE---------ELDIALAEAQRINDE-----
Mvan_0255|M.vanbaalenii_PYR-1 RGSDPGSYSYDLDGPPDPRDDD--------EIDIALAEAQRINDE-----
TH_3159|M.thermoresistible__bu RGPEP--VQVDLDGPPDPPEP---------DEDIKLASARRVNNE-----
MMAR_0859|M.marinum_M ASEKVRRRLRPMASNTNELVEM--------VEREGELEARRVVAM-----
MUL_0611|M.ulcerans_Agy99 ASEKVRRRLRPMASNTNELVEM--------VEREGELEARRVVAM-----
MSMEG_0449|M.smegmatis_MC2_155 RAPRPLLTIRTMLTSSIPVAGVGVALFAAAASVAATALTAEVFLESFNPV
:
Mb1662|M.bovis_AF2122/97 ----------AKERAHNAG-AKNVEERPIVGAPVDALVNLAD--------
Rv1636|M.tuberculosis_H37Rv ----------AKERAHNAG-AKNVEERPIVGAPVDALVNLAD--------
MLBr_01390|M.leprae_Br4923 ----------AKERAHAAG-AKNVEERPVVGAPVDALVNLAE--------
MAB_2312|M.abscessus_ATCC_1997 ----------ARERATAAG-AGSVEERSIEGAPVDALLDLVV--------
Mflv_0416|M.gilvum_PYR-GCK ----------GVELAVAAGLPAEPMRRAVTFTVWQAIIEAAD--------
Mvan_0255|M.vanbaalenii_PYR-1 ----------GLELALAAGLPAEPLRRAATFTVWQAIIEAAD--------
TH_3159|M.thermoresistible__bu ----------GVELARTAGLAAEPLCMPESGTVWNTIIETAD--------
MMAR_0859|M.marinum_M ----------GATLARAAGWDAEPVLKRTWGPEGLRMAEEAD--------
MUL_0611|M.ulcerans_Agy99 ----------GATLARAAGWDAEPVLKRTWGPEGLRMAEEAD--------
MSMEG_0449|M.smegmatis_MC2_155 HVGLLYLPELGGAVVMAFVFGHVISRRAMHYLPLVGMALLAAGVVAFRFA
. . : .
Mb1662|M.bovis_AF2122/97 -EEKADLLVVG------NVGLSTIAGRLLG--SVPANVSRRAKVDVLIVH
Rv1636|M.tuberculosis_H37Rv -EEKADLLVVG------NVGLSTIAGRLLG--SVPANVSRRAKVDVLIVH
MLBr_01390|M.leprae_Br4923 -KTNADLLVVG------NVGLSTIAGRLLG--SVPANVSRRAKIDVLIVH
MAB_2312|M.abscessus_ATCC_1997 -NSKADLLVVG------NVGLNTIAGRLLG--SVPSDVARRSKCDVLIVH
Mflv_0416|M.gilvum_PYR-GCK -ELDADLIVTG------TRATTGFRSLIQS--SVADHVLRRGHRPVLIVP
Mvan_0255|M.vanbaalenii_PYR-1 -ELDADLIVTG------TRATTGLRSLIQS--SVADHVLRRGGRPVLIVP
TH_3159|M.thermoresistible__bu -ELDADLIVTG------TRGTTGLRSLLQS--SVADNVLRRGRRPVLIVP
MMAR_0859|M.marinum_M -EVQADLVLVG------TRGLGGTQAVLG---SVADMVLHRCPRPVVVVP
MUL_0611|M.ulcerans_Agy99 -EVQADLVLVG------TRGLGGTQAVLG---SVADMVLHRCPRPVVVVP
MSMEG_0449|M.smegmatis_MC2_155 LPANQPLALVGSALTGLALGATVAPALFVAGFSLQSNSLQRVFAIIELLR
. * :.* . . : *: :* : ::
Mb1662|M.bovis_AF2122/97 TT------------------------------------------------
Rv1636|M.tuberculosis_H37Rv TT------------------------------------------------
MLBr_01390|M.leprae_Br4923 TTH-----------------------------------------------
MAB_2312|M.abscessus_ATCC_1997 TT------------------------------------------------
Mflv_0416|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0255|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_3159|M.thermoresistible__bu --------------------------------------------------
MMAR_0859|M.marinum_M NPMLAAEYDALPKGPMVVGWDGSAGSETALAAARRLCPDREVVLVFVGDG
MUL_0611|M.ulcerans_Agy99 NPMLAAEYDALPKGPMVVGWDGSAGSETALAAARRLCPDREVVLVFVGDG
MSMEG_0449|M.smegmatis_MC2_155 AVAAFMVAPIFAHFALTATGGLVQGTGDALWISLGLAIGGALFGVVVYLL
Mb1662|M.bovis_AF2122/97 --------------------------------------------------
Rv1636|M.tuberculosis_H37Rv --------------------------------------------------
MLBr_01390|M.leprae_Br4923 --------------------------------------------------
MAB_2312|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_0416|M.gilvum_PYR-GCK --PEP---------------------------------------------
Mvan_0255|M.vanbaalenii_PYR-1 --PEP---------------------------------------------
TH_3159|M.thermoresistible__bu --PGPR--------------------------------------------
MMAR_0859|M.marinum_M SVPPPAA------------------------------GVGELRQLSVERG
MUL_0611|M.ulcerans_Agy99 SAPPPAA------------------------------GVGELRQLSVERG
MSMEG_0449|M.smegmatis_MC2_155 SGARPQAPDIDRFLDGDDPAWYSPPLLARLRPGLPAPQVPAAVTPSRPAA
Mb1662|M.bovis_AF2122/97 --------------------------------------------------
Rv1636|M.tuberculosis_H37Rv --------------------------------------------------
MLBr_01390|M.leprae_Br4923 --------------------------------------------------
MAB_2312|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_0416|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0255|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_3159|M.thermoresistible__bu --------------------------------------------------
MMAR_0859|M.marinum_M RGFHARAVSEALVAAGQDNGAALLVVGSRGHSGARETLLGSVAMGTVHHS
MUL_0611|M.ulcerans_Agy99 RGFHARAVSEALVAAGQDNGAALLVVGSRGHSGARETLRARDIAWQRRNG
MSMEG_0449|M.smegmatis_MC2_155 RVVPALTGPVLIAYDGSERAANAIDFAAGRLSGERDALVVCVWQPADVGF
Mb1662|M.bovis_AF2122/97 --------------------------------------------------
Rv1636|M.tuberculosis_H37Rv --------------------------------------------------
MLBr_01390|M.leprae_Br4923 --------------------------------------------------
MAB_2312|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_0416|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0255|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_3159|M.thermoresistible__bu --------------------------------------------------
MMAR_0859|M.marinum_M HRPVL----------VVPSGWQVPADS-----------------------
MUL_0611|M.ulcerans_Agy99 HRAPLPSAGPGGAERVAGSRRLLSADGALGPRSARWVTSGSDPAGV----
MSMEG_0449|M.smegmatis_MC2_155 TPAGTEPFDADQASEVRRAAERTAARGAELAEAAGFTACSVAVEAAPTWQ
Mb1662|M.bovis_AF2122/97 --------------------------------------------------
Rv1636|M.tuberculosis_H37Rv --------------------------------------------------
MLBr_01390|M.leprae_Br4923 --------------------------------------------------
MAB_2312|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_0416|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_0255|M.vanbaalenii_PYR-1 --------------------------------------------------
TH_3159|M.thermoresistible__bu --------------------------------------------------
MMAR_0859|M.marinum_M --------------------------------------------------
MUL_0611|M.ulcerans_Agy99 --------------------------------------------------
MSMEG_0449|M.smegmatis_MC2_155 GIVETAEKHGASMIVIGPHRRSGFLGHLQGSVAAAVVAHATTPVLVVPEA
Mb1662|M.bovis_AF2122/97 ----------------
Rv1636|M.tuberculosis_H37Rv ----------------
MLBr_01390|M.leprae_Br4923 ----------------
MAB_2312|M.abscessus_ATCC_1997 ----------------
Mflv_0416|M.gilvum_PYR-GCK ----------------
Mvan_0255|M.vanbaalenii_PYR-1 ----------------
TH_3159|M.thermoresistible__bu ----------------
MMAR_0859|M.marinum_M ----------------
MUL_0611|M.ulcerans_Agy99 ----------------
MSMEG_0449|M.smegmatis_MC2_155 TPKLTPELLRSVAVPH