For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2822 | - | - | 100% (288) | putative extracellular solute-binding protein, family 3 |
| M. thermoresistible (build 8) | TH_0515 | - | 2e-11 | 28.16% (277) | amino acid ABC transporter, permease protein, 3-TM region, |
| M. thermoresistible (build 8) | TH_1785 | - | 3e-11 | 24.18% (273) | glutamate binding protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0419c | glnH | 3e-06 | 26.44% (174) | glutamine-binding lipoprotein |
| M. gilvum PYR-GCK | Mflv_1232 | - | 3e-14 | 27.14% (280) | polar amino acid ABC transporter, inner membrane subunit |
| M. tuberculosis H37Rv | Rv0411c | glnH | 3e-06 | 26.44% (174) | glutamine-binding lipoprotein |
| M. leprae Br4923 | MLBr_00303 | glnH | 5e-05 | 27.53% (178) | putative glutamine-binding protein |
| M. abscessus ATCC 19977 | MAB_0277c | - | 1e-09 | 27.64% (275) | amino acid ABC transporter permease |
| M. marinum M | MMAR_0061 | glnQ | 7e-11 | 27.59% (290) | ABC transporter permease protein GlnQ |
| M. avium 104 | MAV_0059 | - | 1e-11 | 27.91% (258) | amino acid ABC transporter, permease protein, |
| M. smegmatis MC2 155 | MSMEG_6307 | - | 4e-14 | 26.95% (256) | glutamine-binding periplasmic protein/glutamine transport |
| M. ulcerans Agy99 | MUL_2809 | glnH | 4e-07 | 27.17% (173) | glutamine-binding lipoprotein GlnH |
| M. vanbaalenii PYR-1 | Mvan_5107 | - | 1e-62 | 44.44% (288) | extracellular solute-binding protein |
CLUSTAL 2.0.9 multiple sequence alignment
TH_2822|M.thermoresistible__bu --------------------------------MSISRAALLLTASALTVA
Mvan_5107|M.vanbaalenii_PYR-1 --------------------------------MSCPSVAGWRTAAAVLVV
Mb0419c|M.bovis_AF2122/97 -MTRRALLARAAAPLAPLALAMVLASCGHSETLGVEATPTLPLPTPVGME
Rv0411c|M.tuberculosis_H37Rv -MTRRALLARAAAPLAPLALAMVLASCGHSETLGVEATPTLPLPTPVGME
MUL_2809|M.ulcerans_Agy99 -MRRLPGLRRAASALAVLALVITLDGCGHSEPLKVESTPTLPLPTPVGME
MLBr_00303|M.leprae_Br4923 MMTRQFKIQRACS---VLATAMMLAACGHAELLTVASMPTLPPPTPVGME
Mflv_1232|M.gilvum_PYR-GCK ------------------------MSRTLGRTRRACYGPPMGNPRRVLLA
MSMEG_6307|M.smegmatis_MC2_155 --------------------------------------------------
MAB_0277c|M.abscessus_ATCC_199 -------------------------------------------------M
MMAR_0061|M.marinum_M ---------------MLAVSATILIVLG--LALAAPALADHNQCAPAGVD
MAV_0059|M.avium_104 -----MGRRGTRRGKLLALTATVLMVCGSSALLAPPAAADRNQCAPAGPK
TH_2822|M.thermoresistible__bu LN---------ACAAGTDEPTATEPVAEP-PACHKEHLPTLEPGVLTLAT
Mvan_5107|M.vanbaalenii_PYR-1 LAGP-------ACAAPVG---VTAPTLDS-SKCSRDVLATQYPGILTFGA
Mb0419c|M.bovis_AF2122/97 IMPPQPPLPPDSSSQDCDPTASLRPFATK-AEADAAVADIRARGRLIVGL
Rv0411c|M.tuberculosis_H37Rv IMPPQPPLPPDSSSQDCDPTASLRPFATK-AEADAAVADIRARGRLIVGL
MUL_2809|M.ulcerans_Agy99 VMPPEPPLPADSSSQDCDPTASLRPFPTK-AEADAAVADIRARGRLIVGL
MLBr_00303|M.leprae_Br4923 QVPPELLLPQDNTEEDCDPTASLRPFPTK-AEADAAVAEIRARGRLIVGL
Mflv_1232|M.gilvum_PYR-GCK VLAALAVLLTACGSSG--PGNSVKDSGV---------LRVGTEGVYAPFS
MSMEG_6307|M.smegmatis_MC2_155 ------MLLAGCGPAANDSDEPIKAAGV---------LRVGTEGVYAPFS
MAB_0277c|M.abscessus_ATCC_199 FRAIVLALLALVAVAG--CAAPTQEP-----------LRVGTEGVYAPFS
MMAR_0061|M.marinum_M SAMVLPADLSSATTAGSDEDVQTTAGVVPLSSVNIGDLGLGTPGVLTAGT
MAV_0059|M.avium_104 SAAVLPENLTRGGSMS-QPDEHTTPTVEPLSSVRIDTLGLGTPGVLTVGT
*
TH_2822|M.thermoresistible__bu KPIAVNPWYINNQPENGQGYESAVAYAVAEKLGYNRSEVRWIRTEFTDTI
Mvan_5107|M.vanbaalenii_PYR-1 DQPVYPPWYMGDDPTNGDGFESALAYALAAKLNYTGDDVRWVRVPFNTAL
Mb0419c|M.bovis_AF2122/97 DIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVPSHVEYRILSAAERV
Rv0411c|M.tuberculosis_H37Rv DIGSNLFSFRDPITGEITGFDVDIAGEVARDIFGVPSHVEYRILSAAERV
MUL_2809|M.ulcerans_Agy99 DIGSNLFSFRDPITGEITGFDVDIASEVARDIFGGPTHVEYRILSAAERI
MLBr_00303|M.leprae_Br4923 EIGSNLFSFRDPITGEITGFDIDIAGEVARDIFGTPSHMEYRILSTAARI
Mflv_1232|M.gilvum_PYR-GCK FHDP--------ATGQLTGYDVDVARAVGEKLG---VNVEFVETPWDSIF
MSMEG_6307|M.smegmatis_MC2_155 YHDP--------ATNELTGYDIDVVKAVADKIG---VQIQFVETPWDSIF
MAB_0277c|M.abscessus_ATCC_199 FHDG--------HTGELTGYDVDVARAVGEKLG---RPVEFVEIPWDAIF
MMAR_0061|M.marinum_M LSDAPPNTCIN-STGQFTGFDNELLRAIAAKLG---LQVRFVGTDFSGLL
MAV_0059|M.avium_104 LSGAPPNVCIT-PTGQYSGFDNQLLRAIAGKLG---LQVRFVGTDFAGLL
. : *:: : :. .: :.: .
TH_2822|M.thermoresistible__bu APGDKP-FDLNLSEVTITEERRQAVDFSSGYYNPTHAFLTTAQSPAAGIT
Mvan_5107|M.vanbaalenii_PYR-1 APGAKT-FDVNLSQFSITEQRRAAVDFSTPYFDVTQAVVAVRTSPAAAVT
Mb0419c|M.bovis_AF2122/97 TALQKSQVDIVVKTMSITCERRKLVNFSTVYLDANQRILAPRDSP---IT
Rv0411c|M.tuberculosis_H37Rv TALQKSQVDIVVKTMSITCERRKLVNFSTVYLDANQRILAPRDSP---IT
MUL_2809|M.ulcerans_Agy99 TALQSSQVDVVVKTMTITCERRKLVNFSTVYLDANQRILTSRDSP---IF
MLBr_00303|M.leprae_Br4923 TALQKSEVDIIVKTMTITCKRRKLVNFSTVYLDAKQRILAPRDSP---IT
Mflv_1232|M.gilvum_PYR-GCK AALEANRFDVVANQVTITPERQQKYDLSEPYSIGEGVIVTRADDDS--IT
MSMEG_6307|M.smegmatis_MC2_155 AALEANRFDIIANEVTITDERKAKYDLSEPYSVGEGVIVTRADDNS--IT
MAB_0277c|M.abscessus_ATCC_199 AGLDAERFDVVANQVTITPARKAKYDISTPYAVGEGVIVTRADDNS--IH
MMAR_0061|M.marinum_M AQVAARRFDVGSASVKLTEARRRTVAFTNGYDFGYYSLVVPPG-SA--IT
MAV_0059|M.avium_104 AQVASRRFDVGSSSIKATDERRQTVAFTNGYDFGYYALVVPPG-SA--IK
: .*: .. * *: :: * .:. :
TH_2822|M.thermoresistible__bu TRDELSGVRLGARTGTTNHQTAVRLSGEYPAIEFATDEEGREALLNGDID
Mvan_5107|M.vanbaalenii_PYR-1 TLDGLRPLRLGAQVGTTSHTAATELGGSVPVQAYNTNVDAKMALLDGEID
Mb0419c|M.bovis_AF2122/97 KVSDLSGKRVCVARGTTSLRRIREIAPPPVIVSVVNWADCLVALQQREID
Rv0411c|M.tuberculosis_H37Rv KVSDLSGKRVCVARGTTSLRRIREIAPPPVIVSVVNWADCLVALQQREID
MUL_2809|M.ulcerans_Agy99 KVSDLSGKRVCVARGTTSLRRIREIAPPPVIVSVVNWADCLVALQQREID
MLBr_00303|M.leprae_Br4923 KPSDLSNKRVCMTRGTTSLHQVSEVVPPPIIVSAENWADCLVAMQQREID
Mflv_1232|M.gilvum_PYR-GCK SLDDLRG--RRAAQSTTSNWAQVARDAGAQIESVEGLTQAMALLSQGRVD
MSMEG_6307|M.smegmatis_MC2_155 SLDDLKG--KVAAENATSNWSEIARQAGARVEAVEGFTQAIKLLNQGRVD
MAB_0277c|M.abscessus_ATCC_199 SLSDVRG--KVAAENATSNWSQIARDAGARVEAVEGFTQSITLLSQGRVD
MMAR_0061|M.marinum_M KFSDLAPGQRIGVVQGTVEESYVVNSLHLQPVKYPDFATVYGNLKTHQID
MAV_0059|M.avium_104 EFTDLAAGQRIGVVQGTVEESYVVDTLHLQPVKYPDFATVYASLKTRQID
: * : :*
TH_2822|M.thermoresistible__bu VLVLDLRTAFSTQLELPGSVIIGQLEPEPGNSEQYGIVLAKD-SPLTDCV
Mvan_5107|M.vanbaalenii_PYR-1 AMVVDLPTALTMAEELRHGVLVGQLPADGEHLEQFGIVLSHG-SPLTRCV
Mb0419c|M.bovis_AF2122/97 AVSTDDTILAGLVEEDPYLHIVGPDMAD----QPYGVGINLDNTGLVRFV
Rv0411c|M.tuberculosis_H37Rv AVSTDDTILAGLVEEDPYLHIVGPDMAD----QPYGVGINLDNTGLVRFV
MUL_2809|M.ulcerans_Agy99 AVSTDDTILAGLVEEDPYLHIVGPNMAN----QPYGIGINLDNTGLVRFV
MLBr_00303|M.leprae_Br4923 AISTDDAILAGLVEEDPYLHIVGPNMAT----QPYGIGINLNNTTLVRFV
Mflv_1232|M.gilvum_PYR-GCK VVVNDSLSIYAYLAETGDTAVKIAGTTGEK--SEQGFAARKNSG-LLPDL
MSMEG_6307|M.smegmatis_MC2_155 VVVNDSIAVYAYLAETGDTSVKIAGEVGEK--SEQGFAARKDSG-YLPEL
MAB_0277c|M.abscessus_ATCC_199 VVINDSIAVYAYLASTGDPAVKIAGATGQR--SEQGFAARKNSG-LLPDL
MMAR_0061|M.marinum_M AWVAPGNQAEAAIRP-GDPAVLVANTFGAG--DFVAYVVARDNRPLLDAL
MAV_0059|M.avium_104 AWVAPAGQAATTIQP-GDPAVVVANTISPG--NFVAYAVAKDNKPLVDAL
. : . . . :
TH_2822|M.thermoresistible__bu SQAVDELGDNGDLFRLQKEWLA----------------------------
Mvan_5107|M.vanbaalenii_PYR-1 SWAVDSLREDGTLAGLQNRWLT----------------------------
Mb0419c|M.bovis_AF2122/97 NGTLERIRNDGTWNTLYRKWLT----------------------------
Rv0411c|M.tuberculosis_H37Rv NGTLERIRNDGTWNTLYRKWLT----------------------------
MUL_2809|M.ulcerans_Agy99 NGTLERIRNDGTWNTLYRKWLS----------------------------
MLBr_00303|M.leprae_Br4923 NGTLERIRRDGTWITLYRKWLT----------------------------
Mflv_1232|M.gilvum_PYR-GCK NTAVEELKADGTMAEISQKYLKTNASG--------------------GQD
MSMEG_6307|M.smegmatis_MC2_155 NRALDELRADGTLAQISQKYLKADATG--------------------AAN
MAB_0277c|M.abscessus_ATCC_199 DKALDQLAADGTLTRISQKYLKTDASG--------------------TTK
MMAR_0061|M.marinum_M NSGLDAVIADGTWSQLYSKWVPRTLPPGWKPGSRAVAAPTLPDFAAIAAA
MAV_0059|M.avium_104 NSGLDAVIADGTWSNLYSQWVPRTLPPGWKPGSQAVAPPKLPDFAAIAAS
. :: : :* : .::
TH_2822|M.thermoresistible__bu ----GPGAAPFLP-------------------------------------
Mvan_5107|M.vanbaalenii_PYR-1 ----DTGPVAVLR-------------------------------------
Mb0419c|M.bovis_AF2122/97 ----VLGPAPAPPTPRYVD-------------------------------
Rv0411c|M.tuberculosis_H37Rv ----VLGPAPAPPTPRYVD-------------------------------
MUL_2809|M.ulcerans_Agy99 ----VLGPAPAPPRPRYVD-------------------------------
MLBr_00303|M.leprae_Br4923 ----VLGPAPAPPTPRYVD-------------------------------
Mflv_1232|M.gilvum_PYR-GCK ---TPQAQP--RSTLQLVLDNLWP----------LAKAALTMTIPLTIIS
MSMEG_6307|M.smegmatis_MC2_155 ---GDGAPPAVRSTWQLIGDNLWP----------LAKAAVTMTIPLTIIS
MAB_0277c|M.abscessus_ATCC_199 PQAGKGDSGSTRSDTQLVLDNLWP----------MARAMITVTLPLTAIS
MMAR_0061|M.marinum_M HRHKPVGPAAPKSALTQLRDSFFDWDMYRQAIPTLFKTGLPNTLILTLSA
MAV_0059|M.avium_104 QHHKAVGPAAPKSTLAQLRDSFFDWDMYRQAIPTLLRTGLPNTLILTFSA
TH_2822|M.thermoresistible__bu --------------------------------------------------
Mvan_5107|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb0419c|M.bovis_AF2122/97 --------------------------------------------------
Rv0411c|M.tuberculosis_H37Rv --------------------------------------------------
MUL_2809|M.ulcerans_Agy99 --------------------------------------------------
MLBr_00303|M.leprae_Br4923 --------------------------------------------------
Mflv_1232|M.gilvum_PYR-GCK FVIGLVIALGVALARLSSNVVLSNLARFYISVIRGTPLLVQLFIVFFALP
MSMEG_6307|M.smegmatis_MC2_155 FAIGLVIALGVALARLSSNAVLSNVARLYISIIRGTPLLVQLFLVFYALP
MAB_0277c|M.abscessus_ATCC_199 FVIGLVIALGVALARMSGHRVVTGLARIYISVIRGTPLLLQLFLIFFALP
MMAR_0061|M.marinum_M SIIGLALGMALAIAGISHQRWLRWPARVYTDIFRGLPEVVIILIIGLGVG
MAV_0059|M.avium_104 SVIGLVLGMVLAVAGISHARWLRWPARVYTDVFRGLPEVVIILLIGLGIG
TH_2822|M.thermoresistible__bu --------------------------------------------------
Mvan_5107|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb0419c|M.bovis_AF2122/97 --------------------------------------------------
Rv0411c|M.tuberculosis_H37Rv --------------------------------------------------
MUL_2809|M.ulcerans_Agy99 --------------------------------------------------
MLBr_00303|M.leprae_Br4923 --------------------------------------------------
Mflv_1232|M.gilvum_PYR-GCK EFG---VKIDPFPAAVIAFSLNVGGYAAEIIRSAIQSIPKGQWEAAETIG
MSMEG_6307|M.smegmatis_MC2_155 EFG---VRIDPFPAAVIAFSLNVGGYAAEIIRAAILSIPKGQWEAAETIG
MAB_0277c|M.abscessus_ATCC_199 EFG---VKISPFPAAVIAFSLNVGGYAAEIIRSSILSIPRGQWEAASSLG
MMAR_0061|M.marinum_M PIVGGLTNNNPYPLGIAALGLMAGAYVGEILRSGIQSVDPGQLEASRALG
MAV_0059|M.avium_104 PIVGGLTNNNPYPLGIAALGMMAAAYIGEILRSGIQSVDPGQLEASRALG
TH_2822|M.thermoresistible__bu --------------------------------------------------
Mvan_5107|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb0419c|M.bovis_AF2122/97 --------------------------------------------------
Rv0411c|M.tuberculosis_H37Rv --------------------------------------------------
MUL_2809|M.ulcerans_Agy99 --------------------------------------------------
MLBr_00303|M.leprae_Br4923 --------------------------------------------------
Mflv_1232|M.gilvum_PYR-GCK LNYVGTLRRIILPQATRVAVPPLSNTLISLVKDTSLASTILVTELLR---
MSMEG_6307|M.smegmatis_MC2_155 LTYGKSLQRIILPQAARVAVPPLSNTLISLVKDTSLASTILVTELLR---
MAB_0277c|M.abscessus_ATCC_199 MSYSTTLWRIVIPQASRVAVPPLSNTLISLVKDTSLASAILVTDVMR---
MMAR_0061|M.marinum_M FSYSAAMRLVVVPQGVRRVLPALVNQFIALLKASALVYFLGLIAQQRELF
MAV_0059|M.avium_104 FSYATAMRLVVVPQGVRRVLPALVNQFIALLKASALVYFLGLVADQRELF
TH_2822|M.thermoresistible__bu --------------------------------------------------
Mvan_5107|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb0419c|M.bovis_AF2122/97 --------------------------------------------------
Rv0411c|M.tuberculosis_H37Rv --------------------------------------------------
MUL_2809|M.ulcerans_Agy99 --------------------------------------------------
MLBr_00303|M.leprae_Br4923 --------------------------------------------------
Mflv_1232|M.gilvum_PYR-GCK QAQIIAAPTFEFFALYGTAAVYYWVICLVLSFGQARFEHRLERYVAR---
MSMEG_6307|M.smegmatis_MC2_155 QAQIAAAPTFEFFALYGTAAVYYWVICLVLSFGQSRIERRLERYVAR---
MAB_0277c|M.abscessus_ATCC_199 TAQVAAAPTFQFFTLYVTAGVYYWIVCMAMSAVQDRLEQRLEKSVAR---
MMAR_0061|M.marinum_M QVGRDLNAQTGNLSPLVAAGIFYLMLTVPLTHLVNYIDARLRRGRRRLDP
MAV_0059|M.avium_104 QVGRDLNAETGNLSPLVAAGACYLILTVPLTHLVNMIDARLRRGRAAVDP
TH_2822|M.thermoresistible__bu ----------------
Mvan_5107|M.vanbaalenii_PYR-1 ----------------
Mb0419c|M.bovis_AF2122/97 ----------------
Rv0411c|M.tuberculosis_H37Rv ----------------
MUL_2809|M.ulcerans_Agy99 ----------------
MLBr_00303|M.leprae_Br4923 ----------------
Mflv_1232|M.gilvum_PYR-GCK ----------------
MSMEG_6307|M.smegmatis_MC2_155 ----------------
MAB_0277c|M.abscessus_ATCC_199 ----------------
MMAR_0061|M.marinum_M EDPPGVVSSTIGEEMT
MAV_0059|M.avium_104 EEPAEMLT--FGQEIT