For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2754 | - | - | 100% (202) | ABC transporter related |
| M. thermoresistible (build 8) | TH_4034 | - | 4e-21 | 33.66% (202) | PUTATIVE ABC transporter, ATP-binding protein SugC |
| M. thermoresistible (build 8) | TH_1784 | - | 5e-21 | 34.22% (187) | ABC transporter, ATP-binding protein GluA |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1270 | sugC | 1e-21 | 33.33% (198) | sugar-transport ATP-binding protein ABC transporter SugC |
| M. gilvum PYR-GCK | Mflv_0115 | - | 7e-60 | 57.64% (203) | ABC transporter related |
| M. tuberculosis H37Rv | Rv1238 | sugC | 1e-21 | 33.33% (198) | sugar-transport ATP-binding protein ABC transporter SugC |
| M. leprae Br4923 | MLBr_01089 | - | 3e-22 | 36.90% (187) | putative ABC-transport protein, ATP-binding component |
| M. abscessus ATCC 19977 | MAB_0429 | - | 7e-21 | 32.54% (209) | putative oligopeptide ABC transporter, ATP-binding protein |
| M. marinum M | MMAR_4203 | sugC | 1e-21 | 34.95% (186) | sugar-transport ATP-binding protein ABC transporter SugC |
| M. avium 104 | MAV_3418 | - | 2e-26 | 35.96% (203) | ABC transporter, ATP-binding protein DppD |
| M. smegmatis MC2 155 | MSMEG_4541 | - | 5e-27 | 35.10% (208) | ABC transporter, ATP-binding protein |
| M. ulcerans Agy99 | MUL_4237 | dppD | 3e-21 | 33.67% (196) | dipeptide-transport ATP-binding protein ABC transporter DppD |
| M. vanbaalenii PYR-1 | Mvan_3884 | - | 5e-24 | 38.83% (188) | ABC transporter-related protein |
CLUSTAL 2.0.9 multiple sequence alignment
TH_2754|M.thermoresistible__bu -----------VTVHDLAADNLTVTFDGH----RVLDDISVTVRTGEVLG
Mflv_0115|M.gilvum_PYR-GCK -------------MTGLQATGVGLALGGR----TVLHAVDLSAPAGDVTG
MAV_3418|M.avium_104 -----------MGPPLLDVSGLTVTYPGAVPRVALDR-VDLAVSSGEFVA
MUL_4237|M.ulcerans_Agy99 --------MSTAAAPLLSVHGLQVRFGTDEPVVAG---MDLSVYRGQTVA
MAB_0429|M.abscessus_ATCC_1997 -------MEVPTSDSVVDITGLTVDFEVDKQWVPAVKGVSLSVAKGEVLA
MSMEG_4541|M.smegmatis_MC2_155 --------MALFDVADLAVTIHTGNRASGRRAVRAVESFSFSVEAGQTAA
Mvan_3884|M.vanbaalenii_PYR-1 MLRVTAGPSTVESFPVIEIENLTKRFGDR----TVLDDISLSVGSGEILA
Mb1270|M.bovis_AF2122/97 -------------MAEIVLDHVNKSYPDG---HTAVRDLNLTIADGEFLI
Rv1238|M.tuberculosis_H37Rv -------------MAEIVLDHVNKSYPDG---HTAVRDLNLTIADGEFLI
MMAR_4203|M.marinum_M -------------MAEIVLEHVNKSYPDG---HTAVRDLNITISDGEFLI
MLBr_01089|M.leprae_Br4923 -------------MAEIVLEHVNKNYPNG---ATAVHDLSITVADGEFLI
: ...: *:
TH_2754|M.thermoresistible__bu ITGPSGCGKTTLLRVLAGLHRP----DTGTVRYDGAPVPAPG--------
Mflv_0115|M.gilvum_PYR-GCK VTGTSGSGKTTLLRVLAGLHQP----DTGEIRYDGEPVAPKG--------
MAV_3418|M.avium_104 VVGESGSGKTTLANAVVGLLPAAARITAGSLTIAGRDVLGLSERQWCRLR
MUL_4237|M.ulcerans_Agy99 VVGESGSGKSTAAAAILGLLAPGGRITAGRIIFDGRDITSADRRVMRTIR
MAB_0429|M.abscessus_ATCC_1997 IVGESGSGKSTTAMAIPALLPPSARVRG-SVKLNGAELLGATNDELRAVR
MSMEG_4541|M.smegmatis_MC2_155 IVGESGSGKSVSLLAATRLLGAHGEVTG-AVRFDGRDLLTISDRELRGIL
Mvan_3884|M.vanbaalenii_PYR-1 VVGPSGAGKSTLSRCVSFLERP----TSGTVRVDGKDFTRLDGDELLAAR
Mb1270|M.bovis_AF2122/97 LVGPSGCGKTTTLNMIAGLEDIS----SGELRIAGERVNEKAPKD-----
Rv1238|M.tuberculosis_H37Rv LVGPSGCGKTTTLNMIAGLEDIS----SGELRIAGERVNEKAPKD-----
MMAR_4203|M.marinum_M LVGPSGCGKTTTLNMIAGLEDIS----SGELRIGGERVNEKAPKD-----
MLBr_01089|M.leprae_Br4923 LIGPSGCGKTTTLNMIAGLEDIS----SGELRIDGDRVNEKAPKD-----
: * **.**:. * : * .
TH_2754|M.thermoresistible__bu --SVALLAQHPRLVCNPRWTLRRIIAEPAAIRGE----RIDP---AAVAA
Mflv_0115|M.gilvum_PYR-GCK --SIALLAQHPRLVCNPRWTLGQIIAEPALIRGD----RFGPDDLHSTAG
MAV_3418|M.avium_104 GSTVGLVPQDPATSLNPVRSIGSQIAEIFPLKGERLSRREARRRCIELLD
MUL_4237|M.ulcerans_Agy99 GREIGYVPQDPMTNLNPVWKVGFQIREALRANTD---GRDARRRTVELLA
MAB_0429|M.abscessus_ATCC_1997 GKDVAVIFQEPMTALNPVYTIGWQIAEAVCAHKK-MSRRQARDRAVELLD
MSMEG_4541|M.smegmatis_MC2_155 GKEIGFVFQDPQSNLHPFKTIGHQIDEVLRIHTR-RARRVRRARVEELLD
Mvan_3884|M.vanbaalenii_PYR-1 -RNVGVIFQTAP--LLRRRTVAQNIALPLQYLHA--TEGSAGTRVTELLD
Mb1270|M.bovis_AF2122/97 -RDIAMVFQSYA--LYPHMTVRQNIAFPLTLAKM-----RKADIAQKVSE
Rv1238|M.tuberculosis_H37Rv -RDIAMVFQSYA--LYPHMTVRQNIAFPLTLAKM-----RKADIAQKVSE
MMAR_4203|M.marinum_M -RDIAMVFQSYA--LYPHMTVRQNIAFPLTLAKM-----KKAAIAQKVEE
MLBr_01089|M.leprae_Br4923 -RDIAMVFQSYA--LYPHMTVRQNIAFPLMLAKV-----KKAEIAQKVSE
:. : * .: *
TH_2754|M.thermoresistible__bu RVGLTP--DLLDRNPAQVSDGQLQRACLARILVQQPVFLLCDEPTAMLDP
Mflv_0115|M.gilvum_PYR-GCK DVGLDP--ALLDRYPGQVSDGQLQRACIARVLIQRARFVLCDEPTAMLDP
MAV_3418|M.avium_104 RVEIDRPAQRLKQYPGELSGGMRQRVLIAIAFALNPGLLIADEPTSALDV
MUL_4237|M.ulcerans_Agy99 QAGMPDPDKHAQRYPHQLSGGMCQRALIAIGLAGRPALLIADEPTSALDV
MAB_0429|M.abscessus_ATCC_1997 LVDMPEPAKRVKHYPHQLSGGQRQRAMIAQALALDPGLLIADEPTTALDV
MSMEG_4541|M.smegmatis_MC2_155 EVGIADAPRAYDHYPAEFSGGMRQRVMIAMAIALNPALIIADEPTTALDV
Mvan_3884|M.vanbaalenii_PYR-1 RVGLAD---RRDFYPAQLSGGQKQRVGIARALALGPSNLLSDEATSGLDP
Mb1270|M.bovis_AF2122/97 TAKILDLTNLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDA
Rv1238|M.tuberculosis_H37Rv TAKILDLTNLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDA
MMAR_4203|M.marinum_M TAKILDLTSFLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDA
MLBr_01089|M.leprae_Br4923 TAQILDLTDLLDRKPSQLSGGQRQRVAMGRAIVRHPKAFLMDEPLSNLDA
. : . * :.*.* **. :. : . .: **. : **
TH_2754|M.thermoresistible__bu IATTDIVALLDELAEH--TALAVVSHDDTVLAGLSRHLMSL---------
Mflv_0115|M.gilvum_PYR-GCK ISTASVVTLLRGLASGG-AAVVLVSHDAVLVETLTAATLALPSPLG----
MAV_3418|M.avium_104 TVQRHVLAVFDRLVAEQRTTVVFITHDIGVATDHASRIVVMRGGVVVEDA
MUL_4237|M.ulcerans_Agy99 TVQRQVLDHLQRRTDEVGTALLLITHDLALAAERAESVLVVDHGVVVESG
MAB_0429|M.abscessus_ATCC_1997 TVQAEILDLMRDLRHRIDAGIILITHDMGVVADMADRIMVMKDGEVVEQG
MSMEG_4541|M.smegmatis_MC2_155 SVQADILQLLKRLQNEHGTAILFVSHDLGAVHEIADTVTVVKDGRVVESG
Mvan_3884|M.vanbaalenii_PYR-1 ATTRSILALLSHLRDEFGLSIILITHEMEVVREIADSVARIEDGRIIESG
Mb1270|M.bovis_AF2122/97 KLRVQMRGEIAQLQRRLGTTTVYVTHDQTEAMTLGDRVVVMYGGIAQQIG
Rv1238|M.tuberculosis_H37Rv KLRVQMRGEIAQLQRRLGTTTVYVTHDQTEAMTLGDRVVVMYGGIAQQIG
MMAR_4203|M.marinum_M KLRVQMRGEIARLQKRLGTTTVYVTHDQTEAMTLGDRVVVMHAGAAQQIG
MLBr_01089|M.leprae_Br4923 KLRVRTRGEIARLQRRLGATTVYVTHDQTEAMTLGDRVVVMRSGVVQQIG
: ::*: :
TH_2754|M.thermoresistible__bu --------------------------------------------------
Mflv_0115|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3418|M.avium_104 PAEAIVAAPRTEYAAHLVR---RLTAPAPAAAPA-------------GSE
MUL_4237|M.ulcerans_Agy99 TASDILRSPQHEYTKRLVAAAPSLTVRDPRRAPARGPVPGGADQPAGGCG
MAB_0429|M.abscessus_ATCC_1997 DAEGIFHRAQQPYTRQLLASVPHLGATLHGRDESNPP----------PTD
MSMEG_4541|M.smegmatis_MC2_155 PRDQIYRAPHERYTRDLLAASELHTLGGPGAGER-------------GTE
Mvan_3884|M.vanbaalenii_PYR-1 SVQDVILDPASELARELLPDRPSVPLDG----------------------
Mb1270|M.bovis_AF2122/97 TPEELYERPANLFVAGFIGSPAMNFFPARLTAIG----------------
Rv1238|M.tuberculosis_H37Rv TPEELYERPANLFVAGFIGSPAMNFFPARLTAIG----------------
MMAR_4203|M.marinum_M TPQELYERPANLFVAGFIGSPAMNFFPAVLTPTG----------------
MLBr_01089|M.leprae_Br4923 TPDELYERPVNLFVAGFIGSPVMNFFPAKLTPNG----------------
TH_2754|M.thermoresistible__bu --------------------------------------------------
Mflv_0115|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3418|M.avium_104 DVIEVAGVAKEFRLG-----ARARHTAVAEVAFTVRRGETLALVGESGSG
MUL_4237|M.ulcerans_Agy99 DILSVSELTKIYRESRGAPWRRGEFRAVDSVSFRLRRASTLAIVGESGSG
MAB_0429|M.abscessus_ATCC_1997 LALSVEHAVIEYPGK------SGSFRAVDDVSFTIGRGEVVGLVGESGSG
MSMEG_4541|M.smegmatis_MC2_155 PLLVVENLRKSYRSRG----RRDRKTVIEDLSFTVNRGEIVGLVGESGSG
Mvan_3884|M.vanbaalenii_PYR-1 ---------------------AGEIWEVSHASRTVPLDWLTSIQSAPGLS
Mb1270|M.bovis_AF2122/97 ------------------------------LTLPFGEVTLAPEVQGVIAA
Rv1238|M.tuberculosis_H37Rv ------------------------------LTLPFGEVTLAPEVQGVIAA
MMAR_4203|M.marinum_M ------------------------------LTLPFGEVTLDPQVQQVIAQ
MLBr_01089|M.leprae_Br4923 ------------------------------LTLPLGELNLSRDVQAMIGQ
TH_2754|M.thermoresistible__bu --------------------------------------------------
Mflv_0115|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3418|M.avium_104 KSTTAKMVVGLLTPTRGTVRVLGRDVAA----LPARARRRHWQDIQFVYQ
MUL_4237|M.ulcerans_Agy99 KSTVARMVLGLLQPTSGTVSFDGARIQPDK--LDRDAQLAFRCRIQPVFQ
MAB_0429|M.abscessus_ATCC_1997 KSTIGRAAVGLLRVASGTICVAGQDIST----ANRKQLRDIRSKVGVVFQ
MSMEG_4541|M.smegmatis_MC2_155 KSTVGRIVAGLQYADAGTIVLDGHRLPTAVGDGVPRLVPEVRRTVQLVFQ
Mvan_3884|M.vanbaalenii_PYR-1 GAAVSVLSASVESIRG----------------------------------
Mb1270|M.bovis_AF2122/97 HPKPENVIVGVR--------------------------------------
Rv1238|M.tuberculosis_H37Rv HPKPENVIVGVR--------------------------------------
MMAR_4203|M.marinum_M HPRPANIIVGIR--------------------------------------
MLBr_01089|M.leprae_Br4923 HPVPDRVIVGVR--------------------------------------
TH_2754|M.thermoresistible__bu --------------------------------------------------
Mflv_0115|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3418|M.avium_104 NPGSALDPRWTVRQILDGPLRSYRVDDRARRAQRIAEALASVGLSDDKLD
MUL_4237|M.ulcerans_Agy99 NPYSSLDPMYSVFRAIEEPLRIHRVGDRGQRRQMVAELVDQVALPSSVLG
MAB_0429|M.abscessus_ATCC_1997 DPGSSLNPRWPIGQSIAEPLTLHTDMDRTQREGRVKTLLEQVQLPAAMRN
MSMEG_4541|M.smegmatis_MC2_155 DPYSSLNPRRTAGDSIAEPLRAQGVP-ATEITTRVQDAATQARLSIDLLQ
Mvan_3884|M.vanbaalenii_PYR-1 -----------------------------------------VAVGRAVLA
Mb1270|M.bovis_AF2122/97 ---------------------------------------PEHIQDAALID
Rv1238|M.tuberculosis_H37Rv ---------------------------------------PEHIQDAALID
MMAR_4203|M.marinum_M ---------------------------------------PEQIQDAALID
MLBr_01089|M.leprae_Br4923 ---------------------------------------PEHLTDAKLID
TH_2754|M.thermoresistible__bu --------------------------------------------------
Mflv_0115|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3418|M.avium_104 RRPGELSGGECQRVAIARALVLRPQIVVLDEPLSALDVVTQDQIVGLLLR
MUL_4237|M.ulcerans_Agy99 RLPRELSGGQRQRVAIARALALRPDVLVCDEAVSALDVLVQAQILDLLAE
MAB_0429|M.abscessus_ATCC_1997 RFPHQLSGGQRQRVGIARALALEPTLLIADEPTSALDVSVQATVLDLFAE
MSMEG_4541|M.smegmatis_MC2_155 RHPAELSGGQRQRVAIARALVLDPALIVADEALSALDVTTQAEIIDLVEH
Mvan_3884|M.vanbaalenii_PYR-1 ITPSAPSG--FVEYLTERGLHVRPVEKVAAGSAEAAA-------------
Mb1270|M.bovis_AF2122/97 AYQRIRALTFQVKVNLVESLGADKYLYFTTESPAVHSVQLDELAEVEGES
Rv1238|M.tuberculosis_H37Rv AYQRIRALTFQVKVNLVESLGADKYLYFTTESPAVHSVQLDELAEVEGES
MMAR_4203|M.marinum_M AYQRIRALTFEVNTDLVESLGSDKYVYFSTAGCDVHSAQLDELAGLEGES
MLBr_01089|M.leprae_Br4923 AHQHGTVLTFKVKVDLVESLGADKYIYFTTTGCDVYSAQLDELAS---EL
TH_2754|M.thermoresistible__bu --------------------------------------------------
Mflv_0115|M.gilvum_PYR-GCK --------------------------------------------------
MAV_3418|M.avium_104 LQRQLGLTYLFVSHDLSVVRRLAHRVVVLRAGRVVETGDTAAVFAAPAAD
MUL_4237|M.ulcerans_Agy99 LQADLGLAYLFISHDLAVVRQISDDVLVMRAGQVVEHAPTEEVFTRPGAQ
MAB_0429|M.abscessus_ATCC_1997 LQREHGFACLFISHDLAVVELVASRIAVLNRGRLAEFGSDTQVLTAPKDD
MSMEG_4541|M.smegmatis_MC2_155 LASERDTAFLFITHDLGVVSSIAQRVIVLAPDGVAEIGPTAEVFAAPRSA
Mvan_3884|M.vanbaalenii_PYR-1 --------------------------------------------------
Mb1270|M.bovis_AF2122/97 ALHENQFVARVPAESKVAIGQSVELAFDTARLAVFDADSGANLTIPHRA-
Rv1238|M.tuberculosis_H37Rv ALHENQFVARVPAESKVAIGQSVELAFDTARLAVFDADSGANLTIPHRA-
MMAR_4203|M.marinum_M EVIENRFVARVSAESRATLGRPIELAFDTTRLTVFDADTGANLTNPIAAV
MLBr_01089|M.leprae_Br4923 EVRENQFVARVSAESKMAIGESIELAFGTAKIAVFDADSGVNLTVSAPTD
TH_2754|M.thermoresistible__bu ----------------------------
Mflv_0115|M.gilvum_PYR-GCK ----------------------------
MAV_3418|M.avium_104 YTRALLDAVPGRRLAHPALSPS------
MUL_4237|M.ulcerans_Agy99 YTQRLLEAIPGGPVAPR-----------
MAB_0429|M.abscessus_ATCC_1997 YTKRLLAAVPVPDPEQQRIRREERQALR
MSMEG_4541|M.smegmatis_MC2_155 YTRRLLDAVPRLEAAVS-----------
Mvan_3884|M.vanbaalenii_PYR-1 ----------------------------
Mb1270|M.bovis_AF2122/97 ----------------------------
Rv1238|M.tuberculosis_H37Rv ----------------------------
MMAR_4203|M.marinum_M Q---------------------------
MLBr_01089|M.leprae_Br4923 A---------------------------