For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2694 | - | - | 100% (171) | - |
M. thermoresistible (build 8) | TH_4351 | - | 4e-26 | 49.49% (99) | PUTATIVE - |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4358c | - | 4e-58 | 62.50% (160) | putative biphenyl-2,3-diol 1,2-dioxygenase III |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_1802 | - | 4e-05 | 29.23% (130) | 2,3-dihydroxybiphenyl-1,2-dioxygenase |
M. smegmatis MC2 155 | MSMEG_3882 | - | 9e-06 | 30.33% (122) | glyoxalase family protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_0591 | - | 4e-05 | 27.20% (125) | glyoxalase/bleomycin resistance protein/dioxygenase |
CLUSTAL 2.0.9 multiple sequence alignment TH_2694|M.thermoresistible__bu -------------------------------------------------- MAB_4358c|M.abscessus_ATCC_199 -------------------------------------------------- MAV_1802|M.avium_104 MEELQMTSTVGAHNGLHSERGARKGEHPGRSRNPVIKVDDLAWLEFQKPD MSMEG_3882|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_0591|M.vanbaalenii_PYR-1 ------------------------------MTPDVFGKVHLGYLVIESDR TH_2694|M.thermoresistible__bu -------------------------------------------------- MAB_4358c|M.abscessus_ATCC_199 -------------------------------------------------- MAV_1802|M.avium_104 LVRAEAFAHAFGFTTVLRSDDELQLRGTDAGTPCVLIRRGPRSRFAGVAF MSMEG_3882|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_0591|M.vanbaalenii_PYR-1 FADWRRFGRDAIGMHLDETLTDVMRFRLDDNACRFLLTRGPAEDTTALGW TH_2694|M.thermoresistible__bu -------------------------------------------------- MAB_4358c|M.abscessus_ATCC_199 -------------------------------------------------- MAV_1802|M.avium_104 QAADEADLRRLGKATGAPIQALPATIGGTTVDLVDPSGIPVRVVAGAHQL MSMEG_3882|M.smegmatis_MC2_155 -------------------------------------------------- Mvan_0591|M.vanbaalenii_PYR-1 EVGDHDTFDAIAAR---------IHDHGVPVSDGAAEEAEIRGVEHFIRF TH_2694|M.thermoresistible__bu -----------------------------MASPSKLAHVVFKTSQLARQV MAB_4358c|M.abscessus_ATCC_199 --------------------------------------MVLRTGRVQEMT MAV_1802|M.avium_104 EALPAQTPHTFNFGHELRRANATQRPPREPARVQRLGHVVMQTTTYLQAL MSMEG_3882|M.smegmatis_MC2_155 ----------------------------MTFAVNRIDHVVLNCRDVEATV Mvan_0591|M.vanbaalenii_PYR-1 PGPNGLLQELYVTPRKGLQHLRLGVAGGFVTGVDGMGHVAIATKKPHQMH :.: TH_2694|M.thermoresistible__bu DWYVKVLDA-QVAFADDTFAFLTYDDEHHRVAFIATGADEPPTDAHTG-- MAB_4358c|M.abscessus_ATCC_199 DWYLQLLDG-KVAFANPMIAFITYDEEHHRLAFLATGASEPPEDRHTG-- MAV_1802|M.avium_104 DWYLDHLG----LIVSDFLFFPGQRDRGPTMSFIRCDRGQTPADHHTLAM MSMEG_3882|M.smegmatis_MC2_155 DFYVRVLGMTEEIFGDGRIALRFPGDADQKINVRPTGAPNWPTGVVDAPG Mvan_0591|M.vanbaalenii_PYR-1 GYYRTVFDARLSDYIDETISGLKFKIRFLRVNERHHSVAIASVNRLPLNP .:* :. . : : . . . TH_2694|M.thermoresistible__bu -------LHHVAFTYAGLDDLLDTYFRLKSQGVEPIMCIN---HGPTTSM MAB_4358c|M.abscessus_ATCC_199 -------LHHVAFTYSSLRGLLDNYLRLKDQGLLPFWCVN---HGPTLSM MAV_1802|M.avium_104 ALGPSNRYVHSAYQVCDLDALAAGGEYLKDHGYQRSWGIGRHIQGSQIFD MSMEG_3882|M.smegmatis_MC2_155 -------SLDLCFIAECSAEDVGAHLRVCGVEITEGPVPKTGALGPMTSH Mvan_0591|M.vanbaalenii_PYR-1 IR---TRIQHCNIQVAELDDMASAYRRVKELGFEMALSVGQHTNDKELSF . : . TH_2694|M.thermoresistible__bu YYRDPDGNQVELQVDN----FTTAEDVQRFIES-----------PQFAAN MAB_4358c|M.abscessus_ATCC_199 YYRDPDGNQIELQIDS----MTN-EETQDFITS-----------EAFAAN MAV_1802|M.avium_104 YWRDPDGFLVEHFSDGDMFDCTLEPGWAPFTASGLAQWGPPASKNFLGTN MSMEG_3882|M.smegmatis_MC2_155 YCRDPDGNLVEVATYQ---------------------------------R Mvan_0591|M.vanbaalenii_PYR-1 YAVTPSGFEWEVGWNP---IVVDEATWEPTTHQG---------ISLWGHT * *.* * TH_2694|M.thermoresistible__bu PVGVLFDPEELAARYRAG-----EPFEELVRL--- MAB_4358c|M.abscessus_ATCC_199 PVGITFEPEALIERFDAG-----ESFAELVRWPSA MAV_1802|M.avium_104 PKALPHEACSMISALRHRNEFDIHRLIGLMKVANS MSMEG_3882|M.smegmatis_MC2_155 PD--------------------------------- Mvan_0591|M.vanbaalenii_PYR-1 PEG--HTIVNLLERFKAGARSVFHAEDSVPALV-- *