For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2354 | - | - | 100% (229) | putative transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0310 | - | 8e-05 | 28.24% (85) | TetR/ACRR family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_2752 | - | 4e-82 | 74.24% (198) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | Rv0302 | - | 8e-05 | 28.24% (85) | TetR/ACRR family transcriptional regulator |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0725c | - | 1e-76 | 73.33% (195) | hypothetical protein MAB_0725c |
| M. marinum M | MMAR_1934 | - | 6e-80 | 72.14% (201) | hypothetical protein MMAR_1934 |
| M. avium 104 | MAV_3668 | - | 8e-73 | 71.20% (191) | hypothetical protein MAV_3668 |
| M. smegmatis MC2 155 | MSMEG_0735 | - | 1e-105 | 89.20% (213) | putative transcriptional regulator |
| M. ulcerans Agy99 | MUL_3113 | - | 1e-78 | 72.86% (199) | AcrR family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_3785 | - | 9e-81 | 75.00% (196) | hypothetical protein Mvan_3785 |
CLUSTAL 2.0.9 multiple sequence alignment
TH_2354|M.thermoresistible__bu MPGVSVLKSPGGPPGARP-AEVPRRANRRGQATRENMLEAALAALATGDP
MSMEG_0735|M.smegmatis_MC2_155 -------MTDAAQPGSGPRAERPNRPNRRGLATRENMLEAALQALATGDP
Mflv_2752|M.gilvum_PYR-GCK ---------------MTEAVA--RRTNRRGQTTRENMLKAALTSLASGDP
Mvan_3785|M.vanbaalenii_PYR-1 ---------------MTEAAAPARRPNRRGQATRANMLEAALKSLASGDP
MMAR_1934|M.marinum_M ---------------MTRAGVAGRRPNRRGNATRESMLEAALTSLASGDP
MAV_3668|M.avium_104 ------------------------------------MLEAALRSLASGEP
MAB_0725c|M.abscessus_ATCC_199 ---------------MSEVVATGRRANRRGLATRESMLEAALRVLASGDP
MUL_3113|M.ulcerans_Agy99 ------------MPGMTDLGVQGRRTNRRGHATRESMLEAALRSLASGDP
Mb0310|M.bovis_AF2122/97 ------------------MGVPAKKKQQQGERSRESILDATERLMATKGY
Rv0302|M.tuberculosis_H37Rv ------------------MGVPAKKKQQQGERSRESILDATERLMATKGY
:*.*: :*:
TH_2354|M.thermoresistible__bu GAVSANRIAKQIGVTWGAVKYQFGDIDGLWAAVLRRTAERRAGVIGRHDA
MSMEG_0735|M.smegmatis_MC2_155 GAVSANRIAKQIGATWGAVKYQFGDIDGLWAAVLHRTAERRAGVLGRHDP
Mflv_2752|M.gilvum_PYR-GCK GSVSANRIAKDIGATWGAVQYQFGDADGFWAAVLHRTAERRADVFAAVDT
Mvan_3785|M.vanbaalenii_PYR-1 GSVSANRIAKDIGATWGAVQYQFGDADGFWAAVLHRTAERRADVFASVDP
MMAR_1934|M.marinum_M GSVSANRIAKEIGATWGAVQYQFGDVDGFWAAVLHRTAERRAGSMLALSK
MAV_3668|M.avium_104 GSVSANRIAKDIGATWGAVQYQFGDTDGFWAAVLHRTAERRAATFSSLSS
MAB_0725c|M.abscessus_ATCC_199 AAVSANKIAKECGATWGAVKYQFGDIDGLWAAVLQRTAERRGEQPWRNDP
MUL_3113|M.ulcerans_Agy99 GAASANRIAKECGATWGAVKYQFGDIDGFWAAVLHRTAERRGELPSNAVS
Mb0310|M.bovis_AF2122/97 AATSISDIRDACGLAPSSIYWHFGSKEGVLAAMMERGAQRFFAAIPTWDE
Rv0302|M.tuberculosis_H37Rv AATSISDIRDACGLAPSSIYWHFGSKEGVLAAMMERGAQRFFAAIPTWDE
.:.* . * . * : .:: ::**. :*. **::.* *:*
TH_2354|M.thermoresistible__bu ----GAPLRERVAGIIDMLYDGLTASDS--RAIENLRAALPRDRAELERL
MSMEG_0735|M.smegmatis_MC2_155 ----GAPLRQRVAGIIDMLYDGLTASDS--RAIENLRAALPRDRAELERL
Mflv_2752|M.gilvum_PYR-GCK ----AAPLRTRVASIIDTLYHGLAEPDS--RAIENLRAALPRDHAELERL
Mvan_3785|M.vanbaalenii_PYR-1 ----DASLRDRVASIIDTLYDGLAEPDS--RAIENLRAALPRDPAELERL
MMAR_1934|M.marinum_M PLQSGRPLQERVAAVIETLFHGLASADS--RAIENLRAALPRDPGELERL
MAV_3668|M.avium_104 PVSPEAPLRERVGAIIETLYRGLAAPDS--RAIENLRAALPRDPDELERL
MAB_0725c|M.abscessus_ATCC_199 ----VGPLDRRVSAIVETLYRGLTAPDS--RAIENLRRALPPEPAELERL
MUL_3113|M.ulcerans_Agy99 ----GGPLPERVAAIIDTLYEGLTSTHS--RAIETLRRALPNNRDELERN
Mb0310|M.bovis_AF2122/97 A---HGPVEQRSERQLTELVSLQSQHPDFLRLFYLLSMERSQDPVVAAVV
Rv0302|M.tuberculosis_H37Rv A---HGPVEQRSERQLTELVSLQSQHPDFLRLFYLLSMERSQDPAVAAVV
.: * : * : . * : * . :
TH_2354|M.thermoresistible__bu YPRTAAELSSWGEGWLQTCQQAFADLDVDPERVAEVASFIPGAMRGITSE
MSMEG_0735|M.smegmatis_MC2_155 YPRTAAELSSWGQGWLATCQQAFADLDVDPERVREVASFIPGAMRGITSE
Mflv_2752|M.gilvum_PYR-GCK YPQTAAELHSWGQSWLQICHNAFAGIDVDPDRVREVATLIPGAMRGLVSE
Mvan_3785|M.vanbaalenii_PYR-1 YPQTAAELFSWGQSWLQICHNAFAGLGVDPDRVREVATLIPGAMRGLVSE
MMAR_1934|M.marinum_M YPRTAAELFSWGRSWLETCQNAFADLDVDPNRVREVAALIPGAMRGLVSE
MAV_3668|M.avium_104 YPRTAAELFSWGKSWLETCQQAFAGLAVDPDRVREVAALIPGAMRGLVSE
MAB_0725c|M.abscessus_ATCC_199 YPRTAAELASWKHRWARACQQAFDGLEVDPVRVREVAAFIPGAMRGLVSE
MUL_3113|M.ulcerans_Agy99 YPRTAAELSSWQRSWALACQKAFAGLEVDPNRVREVAAFIPGAMRGITSE
Mb0310|M.bovis_AF2122/97 RRVRNTAIARFRDSITHLLPSDIPPGKAD-LVVAELTAFAVALSDGVYFA
Rv0302|M.tuberculosis_H37Rv RRVRNTAIARFRDSITHLLPSDIPPGKAD-LVVAELTAFAVALSDGVYFA
: : : . : .* * *:::: . *:
TH_2354|M.thermoresistible__bu RQLG-TYIDLELARRGLTNAIVSYLEDRGPGEKSNQ--
MSMEG_0735|M.smegmatis_MC2_155 RQLG-TYTDLDVARRGLTNAIVSYLEDNGSGRRE----
Mflv_2752|M.gilvum_PYR-GCK RQLG-SYADLDVARRGLTNALVAYLQSPAQPHNDISVT
Mvan_3785|M.vanbaalenii_PYR-1 RQLG-SYADLDVARRGLTNALVAYLQAAD---------
MMAR_1934|M.marinum_M RQLG-SYADLELARRALTNALAGYLKNSRTP-------
MAV_3668|M.avium_104 RQLG-SYADLDMARRGLTNALAAYLEQSRP--------
MAB_0725c|M.abscessus_ATCC_199 KQLG-TYSDLEEARRGLTNAIVAYLGGHE---------
MUL_3113|M.ulcerans_Agy99 KQLG-TYSDLDEARRGLTNAIVAYLENSGVR-------
Mb0310|M.bovis_AF2122/97 GHLEPDTTDVERMYRRLRQALEALIPVLLEET------
Rv0302|M.tuberculosis_H37Rv GHLEPDTTDVERMYRRLRQALEALIPVLLEET------
:* *:: * * :*: . :