For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_2213 | trkB | - | 100% (222) | TRK SYSTEM POTASSIUM UPTAKE PROTEIN CEOC |
| M. thermoresistible (build 8) | TH_2212 | trkA | 2e-11 | 25.00% (204) | TRK SYSTEM POTASSIUM UPTAKE PROTEIN CEOB |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2711 | ceoC | 6e-97 | 78.34% (217) | TRK system potassium uptake protein CEOC |
| M. gilvum PYR-GCK | Mflv_3928 | - | 1e-101 | 81.00% (221) | TrkA domain-containing protein |
| M. tuberculosis H37Rv | Rv2692 | ceoC | 8e-97 | 77.88% (217) | TRK system potassium uptake protein CEOC |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2995 | - | 3e-97 | 78.80% (217) | Trk system potassium uptake protein CeoC |
| M. marinum M | MMAR_2022 | ceoC | 1e-97 | 79.72% (217) | TRK system potassium uptake protein CeoC |
| M. avium 104 | MAV_3583 | - | 1e-101 | 82.49% (217) | TrkB protein |
| M. smegmatis MC2 155 | MSMEG_2769 | - | 1e-103 | 84.23% (222) | TrkB protein |
| M. ulcerans Agy99 | MUL_3330 | ceoC | 7e-98 | 79.72% (217) | TRK system potassium uptake protein CeoC |
| M. vanbaalenii PYR-1 | Mvan_2472 | - | 1e-105 | 85.32% (218) | TrkA domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
TH_2213|M.thermoresistible__bu MKVAIAGAGAVGRSIARELLAS-HEVLLVERNPDHFEPDVIPGAEWRLGD
MAB_2995|M.abscessus_ATCC_1997 MKVAIGGAGAVGRSIARELIESRHEVTLLERNPDHIDPEAVPEAQWRLGD
Mflv_3928|M.gilvum_PYR-GCK MKVAIAGAGAVGRSIARELVDA-HEVTLLERNAEHIDVNAIPAAHWRLGD
Mvan_2472|M.vanbaalenii_PYR-1 MKVAIAGAGAVGRSIARELVES-HDVTLLERNPDHIDVDAVPAAHWRLGD
MSMEG_2769|M.smegmatis_MC2_155 MKVAIAGAGAVGRSIARELLESNHEVTLLERNLDHIDVDAIPAAHWRLGD
Mb2711|M.bovis_AF2122/97 MKVAVAGAGAVGRSVTRELVENGHDITLIERNPDHLDAAAIPEAHWRLGD
Rv2692|M.tuberculosis_H37Rv MKVAVAGAGAVGRSVTRELVENGHDITLIERNPDHLDAAAIPEAHWRLGD
MMAR_2022|M.marinum_M MKVVVAGAGAVGRSVARELIANAHDVTLIERNSDHVDDDAIPAAHWLLGD
MUL_3330|M.ulcerans_Agy99 MKVVVAGAGAVGRSVARELIANAHDVTLIERNSDHVDDDAIPAAHWLLGD
MAV_3583|M.avium_104 MKVAVAGAGAVGRSVTRELLANGHDVTLIERNPDHVDVDAIPAAHWRLGD
***.:.********::***: *:: *:*** :*.: .:* *.* ***
TH_2213|M.thermoresistible__bu ACELSLLESVGLEQYDVVIAATGDDKANVVVSLLAKTEFGVSRVVARVND
MAB_2995|M.abscessus_ATCC_1997 ACEISLLEAEELHTFDVVIAATGDDKANLVLSLLAKTEFAVARVVARVND
Mflv_3928|M.gilvum_PYR-GCK ACELSLLESVKLQEFDVVIAATGDDKANVVLSLLSKTEFAVPRVVARVND
Mvan_2472|M.vanbaalenii_PYR-1 ACELSLLESVKLEEFDVVIAATGDDKANVVVSLLSKTEFAVPRVVARVND
MSMEG_2769|M.smegmatis_MC2_155 ACEITMLESVRLEEFDVVIAATGDDKVNVVVSLLAKTEFAVPRVVARVND
Mb2711|M.bovis_AF2122/97 ACELSLLESIHLEEFDVVVAATGDDKVNVVLSLLAKTEFAVPRVVARVND
Rv2692|M.tuberculosis_H37Rv ACELSLLESIHLEEFDVVVAATGDDKVNVVLSLLAKTEFAVPRVVARVND
MMAR_2022|M.marinum_M ACELSLLESVHLEDFDVVVAATGDDKANVVLSLLAKTEFAVPRVVARVND
MUL_3330|M.ulcerans_Agy99 ACELSLLESVHLEDFDVVVAATGDDKANVVLSLLAKTEFAVPRVVARVND
MAV_3583|M.avium_104 ACELSLLESVQLQEFDVVVAATGDDKANVVLSLLAKTEFAVPRVVARVND
***:::**: *. :***:*******.*:*:***:****.*.********
TH_2213|M.thermoresistible__bu PRNEWLFDENWGVDVAVSTPRMLASLVEEAVAVGDLVRLMEFRQGQANLV
MAB_2995|M.abscessus_ATCC_1997 PRNEWLFDDAWGVDVAVSTPRMLASLVEEAVAVGDVVRLMEFRKGQANLV
Mflv_3928|M.gilvum_PYR-GCK PRNEWLFDESWGVDVAVSTPRMLASLVEEAVSVGDLVRLMEFRKGQANLV
Mvan_2472|M.vanbaalenii_PYR-1 PRNEWLFDESWGVDVAVSTPRMLASLVEEAVSVGDLVRLMEFRKGQANLV
MSMEG_2769|M.smegmatis_MC2_155 PRNEWLFDENWGVDVAVSTPRMLASLVEEAVAVGDLVRLMEFRKGQANLV
Mb2711|M.bovis_AF2122/97 PRNEWLFNDAWGVDVAVSTPRMLASLIEEAVTVGDLVRLMEFRTGQANLV
Rv2692|M.tuberculosis_H37Rv PRNEWLFNDAWGVDVAVSTPRMLASLIEEAVTIGDLVRLMEFRTGQANLV
MMAR_2022|M.marinum_M PRNEWLFTDAWGVDVAVSTPRMLASLIEEAVAVGDLVRLMEFRKGQANLV
MUL_3330|M.ulcerans_Agy99 PRNEWLFTDAWGVDVAVSTPRMLASLIEEAVAVGDLVRLMEFRKGQANLV
MAV_3583|M.avium_104 PRNEWLFTDAWGVDVAVSTPRMLASLIEEAVAVGDLVRLMEFRKGQANLV
******* : ****************:****::**:******* ******
TH_2213|M.thermoresistible__bu EITLPDDTPWGGRPVRRLDLPRDAAMVAILRGPRVIVPEPDEPLEGGDEL
MAB_2995|M.abscessus_ATCC_1997 EITLPDDTPWGGKPVRKLELPRDAVLVAILRGSRVIAAQPDEPLEGGDEL
Mflv_3928|M.gilvum_PYR-GCK EITLPDDTPWGGKPVKRLELPRDATLVTILRGPRVIVPERDEPLEGGDEL
Mvan_2472|M.vanbaalenii_PYR-1 EITLPDDTPWGGKPVKRLELPRDATLVTILRGPRVIVPERDEPLEGGDEL
MSMEG_2769|M.smegmatis_MC2_155 EITLPDDTPWGGKPVKRLELPRDAALVTILRGARVIVPEADEPLEGGDEL
Mb2711|M.bovis_AF2122/97 EITLPDNTPWGGKPVRKLQLPRDAALVTILRGPRVIVPEADEPLEGGDEL
Rv2692|M.tuberculosis_H37Rv EITLPDNTPWGGKPVRKLQLPRDAALVTILRGPRVIVPEADEPLEGGDEL
MMAR_2022|M.marinum_M EITLPDDTPWGGKPVRKLQLPRDAVLVTILRGPRVIVPQADEPLEGGDEL
MUL_3330|M.ulcerans_Agy99 EITLPDDTPWGGKPVRKLQLPRDAVLVTILRGPRVIVPQADEPLEGGDEL
MAV_3583|M.avium_104 EITLPDDTPWGGKPVRRLQLPRDAALVTILRGPRVIVPEEDEPLEGGDEL
******:*****:**::*:*****.:*:****.***..: **********
TH_2213|M.thermoresistible__bu LFVAVAEVEDELREIILRPPRQ
MAB_2995|M.abscessus_ATCC_1997 ILVATADIEDELHRAVLPE---
Mflv_3928|M.gilvum_PYR-GCK LFVTAAEAEDELRTLLLNPQQR
Mvan_2472|M.vanbaalenii_PYR-1 LFVAVAESEDELRELVLNPQHR
MSMEG_2769|M.smegmatis_MC2_155 LFVATTEVEDELLEVLLRPTRR
Mb2711|M.bovis_AF2122/97 LFVAVTEAEEELSRLLLPSM--
Rv2692|M.tuberculosis_H37Rv LFVAVTEAEEELSRLLLPSM--
MMAR_2022|M.marinum_M LFVAVTEAEEELSQLLLPSS--
MUL_3330|M.ulcerans_Agy99 LFVAVTEAEEELSQLLLPSS--
MAV_3583|M.avium_104 LFVAVAEAEEELQKLLLG----
::*:.:: *:** :*