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aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2182 | sdhA | - | 100% (585) | PROBABLE SUCCINATE DEHYDROGENASE (FLAVOPROTEIN SUBUNIT) SDHA (SUCCINIC DEHYDROGENASE) (FUMARATE REDUCTASE) (FUMARATE DEHYDROGENASE) (FUMARIC HYDROGENASE) |
M. thermoresistible (build 8) | TH_4672 | - | 1e-92 | 38.32% (595) | PUTATIVE succinate dehydrogenase subunit A |
M. thermoresistible (build 8) | TH_0808 | nadB | 2e-52 | 36.24% (425) | L-aspartate oxidase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3347 | sdhA | 0.0 | 90.51% (590) | succinate dehydrogenase flavoprotein subunit |
M. gilvum PYR-GCK | Mflv_4846 | sdhA | 0.0 | 92.98% (584) | succinate dehydrogenase flavoprotein subunit |
M. tuberculosis H37Rv | Rv3318 | sdhA | 0.0 | 90.51% (590) | succinate dehydrogenase flavoprotein subunit |
M. leprae Br4923 | MLBr_00697 | sdhA | 0.0 | 90.41% (584) | succinate dehydrogenase flavoprotein subunit |
M. abscessus ATCC 19977 | MAB_3675 | sdhA | 0.0 | 92.12% (584) | succinate dehydrogenase flavoprotein subunit |
M. marinum M | MMAR_1201 | sdhA | 0.0 | 92.12% (584) | succinate dehydrogenase (flavoprotein subunit) SdhA |
M. avium 104 | MAV_4299 | sdhA | 0.0 | 90.92% (584) | succinate dehydrogenase flavoprotein subunit |
M. smegmatis MC2 155 | MSMEG_1670 | sdhA | 0.0 | 93.66% (584) | succinate dehydrogenase flavoprotein subunit |
M. ulcerans Agy99 | MUL_1369 | sdhA | 0.0 | 91.78% (584) | succinate dehydrogenase flavoprotein subunit |
M. vanbaalenii PYR-1 | Mvan_1587 | sdhA | 0.0 | 93.15% (584) | succinate dehydrogenase flavoprotein subunit |
CLUSTAL 2.0.9 multiple sequence alignment TH_2182|M.thermoresistible__bu ----MIQEHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLTKVYPTRSHTGA MAB_3675|M.abscessus_ATCC_1997 MGSPIIQEHRYDVVIIGAGGAGMRAAVEAGPRARTAVLTKLYPTRSHTGA Mflv_4846|M.gilvum_PYR-GCK ----MIVEHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLTKLYPTRSHTGA Mvan_1587|M.vanbaalenii_PYR-1 ----MIVEHRYDVVIVGAGGAGMRAAVEAGPRARTAVLTKLYPTRSHTGA MSMEG_1670|M.smegmatis_MC2_155 ----MIQEHRYDVVIVGAGGAGMRAAVEAGPRARTAVLTKLYPTRSHTGA Mb3347|M.bovis_AF2122/97 ----MICQHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLTKLYPTRSHTGA Rv3318|M.tuberculosis_H37Rv ----MICQHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLTKLYPTRSHTGA MLBr_00697|M.leprae_Br4923 ----MIQQHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLTKLYPTRSHTGA MAV_4299|M.avium_104 ----MIQQHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLTKLYPTRSHTGA MMAR_1201|M.marinum_M ----MIQQHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLTKLYPTRSHTGA MUL_1369|M.ulcerans_Agy99 ----MIQQHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLAKLYPTRSHTGA :* :*******:****************.*****:*:********* TH_2182|M.thermoresistible__bu AQGGMCAALANVEEDNWEWHAFDTVKGGDYLADQDAVEIMCREAIDAVLD MAB_3675|M.abscessus_ATCC_1997 AQGGMCAALANVEEDNWEWHTFDTVKGGDYLADQDAVEIMCKEAIDAVLD Mflv_4846|M.gilvum_PYR-GCK AQGGMCAALANVEEDNWEWHTFDTVKGGDYLADQDAVEIMAKEAIDAVLD Mvan_1587|M.vanbaalenii_PYR-1 AQGGMCAALANVEEDNWEWHTFDTVKGGDYLADQDAVEIMAKEAIDAVLD MSMEG_1670|M.smegmatis_MC2_155 AQGGMCAALANVEEDNWEWHTFDTVKGGDYLADQDAVEIMCKEAIDAVLD Mb3347|M.bovis_AF2122/97 AQGGMCAALANVEDDNWEWHTFDTVKGGDYLADQDAVEIMCKEAIDAVLD Rv3318|M.tuberculosis_H37Rv AQGGMCAALANVEDDNWEWHTFDTVKGGDYLADQDAVEIMCKEAIDAVLD MLBr_00697|M.leprae_Br4923 AQGGMCAALANVEDDNWEWHAFDTVKGGDYLADQDAVEIMCKEAIDAVLD MAV_4299|M.avium_104 AQGGMCAALANVEEDNWEWHTFDTVKGGDYLADQDAVEIMCKEAIDAVLD MMAR_1201|M.marinum_M AQGGMCAALANVEDDNWEWHTFDTVKGGDYLADQDAVEIMCKEAIDAVLD MUL_1369|M.ulcerans_Agy99 AQGGMCAALANVEDDNWEWHTFDTVKGGDYLADQDAVEIMCKEAIDAVLD *************:******:*******************.:******** TH_2182|M.thermoresistible__bu LEKMGMPFNRTPEGKIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQT MAB_3675|M.abscessus_ATCC_1997 LEKMGMPFNRTPQGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQT Mflv_4846|M.gilvum_PYR-GCK LEKMGMPFNRTPEGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQT Mvan_1587|M.vanbaalenii_PYR-1 LEKMGMPFNRTPEGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQT MSMEG_1670|M.smegmatis_MC2_155 LEKMGMPFNRTPEGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQT Mb3347|M.bovis_AF2122/97 LEKMGMPFNRTPEGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQT Rv3318|M.tuberculosis_H37Rv LEKMGMPFNRTPEGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQT MLBr_00697|M.leprae_Br4923 LEKMGMPFNRTPEGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQT MAV_4299|M.avium_104 LEKMGMPFNRTPEGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQT MMAR_1201|M.marinum_M LEKMGMPFNRTPEGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQT MUL_1369|M.ulcerans_Agy99 LEKMGMPFNRTPEGRIDQRRFGGHTRDHGKAPVRRACYAADRTGHMILQT ************:*:*********************************** TH_2182|M.thermoresistible__bu LYQNCVKHDVQFFNEFYALDLAMTETPSGRVATGVIAYELATGDIHVFHA MAB_3675|M.abscessus_ATCC_1997 LYQNCVKHDVEFFNEFYALDIALTETPNGPVATGVVAYELATGDIHVFHA Mflv_4846|M.gilvum_PYR-GCK LYQNCVKHDVEFFNEFYALDITMTETPSGPVATGVVAYELATGDIHVFHA Mvan_1587|M.vanbaalenii_PYR-1 LYQNCVKHDVEFFNEFYALDITLTETASGPVATGVVAYELATGDIHIFHA MSMEG_1670|M.smegmatis_MC2_155 LYQNCVKHDVEFFNEFYALDIALTETPAGPVATGVIAYELATGDIHVFHA Mb3347|M.bovis_AF2122/97 LYQNCVKHDVEFFNEFYALDLALTQTPSGPVATGVIAYELATGDIHVFHA Rv3318|M.tuberculosis_H37Rv LYQNCVKHDVEFFNEFYALDLALTQTPSGPVATGVIAYELATGDIHVFHA MLBr_00697|M.leprae_Br4923 LYQNCVKHDVEFFNEFYALDLVLTQTPSGPVTTGVVAYELATGDIHVFHT MAV_4299|M.avium_104 LYQNCVRHDVQFFNEFYALDLVLTQTPSGPVASGVVAYELATGDIHVFHA MMAR_1201|M.marinum_M LYQNCVKHDVEFFNEFYALDLALTETPSGPVATGVIAYELATGDIHIFHA MUL_1369|M.ulcerans_Agy99 LYQNCVKHDVEFFNEFYALDLALTETPSGPVATGVIAYELATGDIHIFHA ******:***:*********:.:*:*. * *::**:**********:**: TH_2182|M.thermoresistible__bu KAIVFATGGSGRMYKTTSNAHTLTGDGLGIVFRKGLPLEDMEFHQFHPTG MAB_3675|M.abscessus_ATCC_1997 KAIVFATGGSGRMYKTTSNAHTLTGDGLGIVFRKGLPLEDMEFHQFHPTG Mflv_4846|M.gilvum_PYR-GCK KAIVFATGGSGRMYKTTSNAHTLTGDGLGIIFRKGLPLEDMEFHQFHPTG Mvan_1587|M.vanbaalenii_PYR-1 KAIVFATGGSGRMYKTTSNAHTLTGDGLGIIFRKGLPLEDMEFHQFHPTG MSMEG_1670|M.smegmatis_MC2_155 KAIVFATGGSGRMYKTTSNAHTLTGDGLGIVFRKGLPLEDMEFHQFHPTG Mb3347|M.bovis_AF2122/97 KAVVIATGGSGRMYKTTSNAHTLTGDGIGIVFRKGLPLEDMEFHQFHPTG Rv3318|M.tuberculosis_H37Rv KAVVIATGGSGRMYKTTSNAHTLTGDGIGIVFRKGLPLEDMEFHQFHPTG MLBr_00697|M.leprae_Br4923 KAVVIATGGSGRMYKTTSNAHTLTGDGIGIVFRKGLPLEDMEFHQFHPTG MAV_4299|M.avium_104 KAVVLATGGSGRMYKTTSNAHTLTGDGIGIVFRKGLPLEDMEFHQFHPTG MMAR_1201|M.marinum_M KAIVLATGGSGRMYKTTSNAHTLTGDGIGIVFRKGLPLEDMEFHQFHPTG MUL_1369|M.ulcerans_Agy99 KAIVLATGGSGRMYKTTSNAHTLTGDGIGIVFRKGLPLEDMEFHQFHPTG **:*:**********************:**:******************* TH_2182|M.thermoresistible__bu LAGLGILISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARSMVL MAB_3675|M.abscessus_ATCC_1997 LAGLGILISEAVRGEGGRLLNADGERFMERYAPTIVDLAPRDIVARSMVL Mflv_4846|M.gilvum_PYR-GCK LAGLGILISEAVRGEGGRLLNGDGERFMERYAPTIVDLAPRDIVARSMVL Mvan_1587|M.vanbaalenii_PYR-1 LAGLGILISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARSMVL MSMEG_1670|M.smegmatis_MC2_155 LAGLGILISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARSMVL Mb3347|M.bovis_AF2122/97 LAGLGILISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARSMVL Rv3318|M.tuberculosis_H37Rv LAGLGILISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARSMVL MLBr_00697|M.leprae_Br4923 LAGLGILISEAVRGEGGRLLNGENERFMEHYAPTIVDLAPRDIVARSMVL MAV_4299|M.avium_104 LAGLGILISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARSMVL MMAR_1201|M.marinum_M LAGLGILISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARSMVL MUL_1369|M.ulcerans_Agy99 LAGLGILISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARSMVL *********************.:.*****:******************** TH_2182|M.thermoresistible__bu EVLEGRGAGPNKDYVYIDVRHLGEDVLEAKLPDITEFARTYLGVDPVTEL MAB_3675|M.abscessus_ATCC_1997 EVLEGRGAGPNKDYVYIDVRHLGADVLEAKLPDITEFARTYLGVDPVTEL Mflv_4846|M.gilvum_PYR-GCK EVLEGRGAGPNKDYVYIDVRHLGEDVLEAKLPDITEFARTYLGVDPVKEL Mvan_1587|M.vanbaalenii_PYR-1 EVLEGRGAGPNKDYVYIDVRHLGEDVLEAKLPDITEFARTYLGVDPVKEL MSMEG_1670|M.smegmatis_MC2_155 EVLEGRGAGPNKDYVYIDVRHLGEDVLEAKLPDITEFARTYLGVDPVKEL Mb3347|M.bovis_AF2122/97 EVLEGRGAGPLKDYVYIDVRHLGEEVLEAKLPDITEFARTYLGVDPVTEL Rv3318|M.tuberculosis_H37Rv EVLEGRGAGPLKDYVYIDVRHLGEEVLEAKLPDITEFARTYLGVDPVTEL MLBr_00697|M.leprae_Br4923 EVLEGRGAGPHKDYVYIDVRHLGEEVLESKLPDITEFSRTYLGVDPVHEL MAV_4299|M.avium_104 EVLEGRGAGPHKDYVYIDVRHLGEDVLESKLPDITEFARTYLGVDPVHEL MMAR_1201|M.marinum_M EVLEGRGAGPHKDYVYIDVRHLGEDVLEAKLPDITEFARTYLGVDPVHEL MUL_1369|M.ulcerans_Agy99 EVLEGRGAGPHKDYVYIDVRHLGEDVLEAKLPDITEFARTYLGVDPVHEL ********** ************ :***:********:********* ** TH_2182|M.thermoresistible__bu VPVYPTCHYLMGGIPTTVHGQVLADNTTIVPGLYAAGECACVSVHGANRL MAB_3675|M.abscessus_ATCC_1997 VPVYPTCHYVMGGIPTNIHGQVLRDNDNVVPGLYAAGECACVSVHGANRL Mflv_4846|M.gilvum_PYR-GCK VPVYPTCHYVMGGIPTTVNGQVLSDNTTVVPGLYAAGECACVSVHGANRL Mvan_1587|M.vanbaalenii_PYR-1 VPVYPTCHYVMGGIPTTVNGQVLADNTTIIPGLYAAGECACVSVHGANRL MSMEG_1670|M.smegmatis_MC2_155 VPVYPTCHYVMGGIPTTVNGQVLRDNTNVIPGLYAAGECACVSVHGANRL Mb3347|M.bovis_AF2122/97 VPVYPTCHYLMGGIPTTVTGQVLRDNTSVVPGLYAAGECACVSVHGANRL Rv3318|M.tuberculosis_H37Rv VPVYPTCHYLMGGIPTTVTGQVLRDNTSVVPGLYAAGECACVSVHGANRL MLBr_00697|M.leprae_Br4923 VPVYPTCHYVMGGIPTTVTGQVLRDNTSTVPGLYAAGECACVSVHGANRL MAV_4299|M.avium_104 VPVYPTCHYVMGGIPTTVTGQVLRDNTSTVPGLYAAGECACVSVHGANRL MMAR_1201|M.marinum_M VPVYPTCHYVMGGIPTTVTGQVLRDNTHVVPGLFAAGECACVSVHGANRL MUL_1369|M.ulcerans_Agy99 VPVYPTCHYVMGGIPTTVTGQVLRDNTHVVPGLFAAGECACVSVHGANRL *********:******.: **** ** :***:**************** TH_2182|M.thermoresistible__bu GTNSLLDINVFGRRAGLAAADYAQNHDFVPLPDNPAGMVTEWIAHILSEH MAB_3675|M.abscessus_ATCC_1997 GTNSLLDINVFGRRAGIAAAEYAEAHDFIDLPENPATMVTEWVADVLSEH Mflv_4846|M.gilvum_PYR-GCK GTNSLLDINVFGRRAGIAAANYALGHDFVELPESPAEMVVGWVGDILSEH Mvan_1587|M.vanbaalenii_PYR-1 GTNSLLDINVFGRRAGIAAANYALGHDFVDLPENPAEMVVGWVGDILSEH MSMEG_1670|M.smegmatis_MC2_155 GTNSLLDINVFGRRAGIAAAEYAQNHNFVDMPENPAEMVVGWVGDILSEH Mb3347|M.bovis_AF2122/97 GTNSLLDINVFGRRAGIAAASYAQGHDFVDMPPNPEAMVVGWVSDILSEH Rv3318|M.tuberculosis_H37Rv GTNSLLDINVFGRRAGIAAASYAQGHDFVDMPPNPEAMVVGWVSDILSEH MLBr_00697|M.leprae_Br4923 GTNSLLDINVFGRRSGIAAASYASANDFVDMPPNPAEMVISWVANILSEH MAV_4299|M.avium_104 GTNSLLDINVFGRRAGIAAANYARGHDFVDMPPDPAAMVVRWVADILSEH MMAR_1201|M.marinum_M GTNSLLDINVFGRRAGIAAARYARGHDFVDMPAEPASMVVSWVADILSEH MUL_1369|M.ulcerans_Agy99 GTNSLLDINVFGRRAGIAAARYARGHDFVDMPAEPASMVVSWVADILSEH **************:*:*** ** ::*: :* .* ** *:..:**** TH_2182|M.thermoresistible__bu GHERVADIRGALQQTMDNNAAVFRTEETLKTALSDIHRLKERYSRITVQD MAB_3675|M.abscessus_ATCC_1997 GDERVADIRTELQQSMDNNAAVFRTEDTLKQALNDIHALKERYSRITVHD Mflv_4846|M.gilvum_PYR-GCK GNERVADIRGALQQSMDNNAAVFRTEETLKQALTDIHALKERYSRITVQD Mvan_1587|M.vanbaalenii_PYR-1 GNERVADIRGALQQSMDNNAAVFRTEETLKQALTDIHALKERYSRITVQD MSMEG_1670|M.smegmatis_MC2_155 GNERVADIRGALQQSMDNNAAVFRTEETLKQALTDIHALKERYSRITVHD Mb3347|M.bovis_AF2122/97 GNERVADIRGALQQSMDNNAAVFRTEETLKQALTDIHALKERYSRITVHD Rv3318|M.tuberculosis_H37Rv GNERVADIRGALQQSMDNNAAVFRTEETLKQALTDIHALKERYSRITVHD MLBr_00697|M.leprae_Br4923 GNERVADIRGALQQTMDNNAAVFRTEETLKQALTDIHSLKERYSRITVHD MAV_4299|M.avium_104 GNERVADIRGTLQQSMDNNAAVFRTEETLKQALTDIHACKERYSRIRIHD MMAR_1201|M.marinum_M GTERVADIRGALQQTMDNNAAVFRTEETLKQALTDIHALKERYSRITVHD MUL_1369|M.ulcerans_Agy99 GNEPVADIRGALQQTMDNNAAVFRTEETLKQALTDIHALKERYSRITVHD * * ***** ***:***********:*** **.*** ******* ::* TH_2182|M.thermoresistible__bu KGKRYNSDLLEAIELGFLLELAEVTVVGALNRKETRGGHAREDYPNRDDT MAB_3675|M.abscessus_ATCC_1997 KGKRYNSDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDYPNRDDT Mflv_4846|M.gilvum_PYR-GCK KGKRYNSDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDYPNRDDT Mvan_1587|M.vanbaalenii_PYR-1 KGKRYNSDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDYPNRDDT MSMEG_1670|M.smegmatis_MC2_155 KGKRYNSDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDYPNRDDT Mb3347|M.bovis_AF2122/97 KGKRFNTDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDYPNRDDV Rv3318|M.tuberculosis_H37Rv KGKRFNTDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDYPNRDDV MLBr_00697|M.leprae_Br4923 KGKSFNSDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDYPHRDDT MAV_4299|M.avium_104 KGKRFNSDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDYPNRDDV MMAR_1201|M.marinum_M KGKRFNSDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDYPNRDDV MUL_1369|M.ulcerans_Agy99 KGKRFNSDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDYPNRDDV *** :*:***************************:**********:***. TH_2182|M.thermoresistible__bu NYMRHTMAY------KQGTELLSDIRLDYKPVVQTRYEPMERKY MAB_3675|M.abscessus_ATCC_1997 NYMRHTMAY------KQGAELLSDIRLDYKPVVQTRYEPMERKY Mflv_4846|M.gilvum_PYR-GCK NYMRHTMAY------KEGSDLLSDIRLDYKPVVMTRYEPMERKY Mvan_1587|M.vanbaalenii_PYR-1 NYMRHTMAY------KEGTDLLSDIRLDYKPVVQTRYEPMERKY MSMEG_1670|M.smegmatis_MC2_155 NYMRHTMAY------KQGTDLLSDIRLDYKPVVQTRYEPMERKY Mb3347|M.bovis_AF2122/97 NYMRHTMAYKEIGADKEGPELRSDVRLDFKPVVQTRYEPKERKY Rv3318|M.tuberculosis_H37Rv NYMRHTMAYKEIGADKEGPELRSDVRLDFKPVVQTRYEPKERKY MLBr_00697|M.leprae_Br4923 NYMRHTMAY------KQGTDLLSDIALDFKPVVQTRYEPQERKY MAV_4299|M.avium_104 NYMRHTMAY------KQGTDLLSDIALDFKPVVQTRYEPKERKY MMAR_1201|M.marinum_M NYMRHTMAY------KEGTDLLSDIRLDFKPVVQTRYEPKERKY MUL_1369|M.ulcerans_Agy99 NYMRHTMAY------KEGTDLLSDIRLDFKPVVQTRYEPKERKY ********* *:*.:* **: **:**** ***** ****