For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2050 | - | 100% (189) | POSSIBLE CONSERVED SECRETED PROTEIN | |
M. thermoresistible (build 8) | TH_1413 | dacB | 6e-05 | 33.33% (144) | D-alanyl-D-alanine |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3004 | - | 4e-54 | 58.89% (180) | hypothetical protein Mb3004 |
M. gilvum PYR-GCK | Mflv_4218 | - | 2e-56 | 56.92% (195) | hypothetical protein Mflv_4218 |
M. tuberculosis H37Rv | Rv2980 | - | 4e-54 | 58.89% (180) | hypothetical protein Rv2980 |
M. leprae Br4923 | MLBr_01677 | - | 1e-48 | 54.29% (175) | putative secreted protein |
M. abscessus ATCC 19977 | MAB_3285 | - | 2e-38 | 43.18% (176) | hypothetical protein MAB_3285 |
M. marinum M | MMAR_1734 | - | 6e-56 | 54.77% (199) | hypothetical protein MMAR_1734 |
M. avium 104 | MAV_3831 | - | 5e-55 | 56.35% (181) | hypothetical protein MAV_3831 |
M. smegmatis MC2 155 | MSMEG_2396 | - | 1e-60 | 58.85% (192) | hypothetical protein MSMEG_2396 |
M. ulcerans Agy99 | MUL_1977 | - | 2e-55 | 57.61% (184) | hypothetical protein MUL_1977 |
M. vanbaalenii PYR-1 | Mvan_2149 | - | 3e-56 | 53.17% (205) | hypothetical protein Mvan_2149 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4218|M.gilvum_PYR-GCK --------------MDSET-------ADGPPRAVLIAAAAV-AVGAVVAL Mvan_2149|M.vanbaalenii_PYR-1 --------------MSSES-------TDGPPRAALIASLIV-AVGGLVAV Mb3004|M.bovis_AF2122/97 --------------MTGES--------DGPPRAVLIAAAAL-AAAVIGVI Rv2980|M.tuberculosis_H37Rv --------------MTGES--------DGPPRAVLIAAAAL-AAAVIGVI MLBr_01677|M.leprae_Br4923 --------------MTSNSDAGSAVDAGGPPRTVIIAAVVL-TAATIGTI MAV_3831|M.avium_104 --------------MATESEAD-----GGPPRAVIMVAVAL-AVTTIGVI MMAR_1734|M.marinum_M MGQESRVEPEVSDAVTGDTPASPQPDPDGPPRVLIIAAALL-AVAALGTI MUL_1977|M.ulcerans_Agy99 --------------MTGDTPANPQPDPDGPPRVLIIAAALL-AVAALGTI TH_2050|M.thermoresistible__bu ----------VADKSHGESHEIAPEEPDAPPRALLIAAIAV-AVVAVVAI MSMEG_2396|M.smegmatis_MC2_155 --------------------MTDPHTTDGPPRALLIAAVVV-AVSVLITV MAB_3285|M.abscessus_ATCC_1997 --------------MQSED---------GPPRKLLIGIAVFGAIAALAVL .*** :: . : : .: Mflv_4218|M.gilvum_PYR-GCK LIVVAVMQREPAQKPVAVSGIPAPQADSPQCRSLVEALP-EQLGDYRRAQ Mvan_2149|M.vanbaalenii_PYR-1 LVVAAVLQRTPEPQPVAIAGIPAPRAESPQCRALVDALP-DQLGDYRRAA Mb3004|M.bovis_AF2122/97 LVVAANRQPPE--RPVVIPAVPAPQATGPGCKALLAALP-QRLGEYRRAP Rv2980|M.tuberculosis_H37Rv LVVAANRQPPE--RPVVIPAVPAPQATGPGCKALLAALP-QRLGEYRRAP MLBr_01677|M.leprae_Br4923 LVLAATLHEPP--QPVVITAVPAPQATTAACRSLTQALP-QRLGDYERAP MAV_3831|M.avium_104 LAIAATREAPP--QPVAVAAFPAPHAGDAACRALLDALP-QRLGDYQRAP MMAR_1734|M.marinum_M LVIAANREVPR--QPVAVPSVPAPQAASPACHALLTALP-QRLGDYQRAP MUL_1977|M.ulcerans_Agy99 LVIAANREVPR--QPVAVPSVPAPQAASPACHALLTALP-QRLGDYQRAP TH_2050|M.thermoresistible__bu LAVAASRQGDPARQPVAIAAVPAPHADDPGCQELLDALP-EQLGDFERAP MSMEG_2396|M.smegmatis_MC2_155 LGIAASHKQSPEQEPVAISSVPAPQADSPECHALMDGLP-EQLGDFRRAP MAB_3285|M.abscessus_ATCC_1997 FGVLKYAQFQNETRPLSVANIPAPQANSPLCVDMASAYPGKMAGDWSRVE : : . .*: :. .***:* . * : . * . *:: *. Mflv_4218|M.gilvum_PYR-GCK LVEPAPQGAAAWQPEAPDGEALILRCGLDRPAEFVTGAPLQVVDAVSWFR Mvan_2149|M.vanbaalenii_PYR-1 LLEPAPPGTAAWQREEPGSEALILRCGLDRPAEFVAGAPVQVVDAVEWFR Mb3004|M.bovis_AF2122/97 VAEPTTAGATAWRT-GPNSTPVILRCGLDRPAEFVVGSAIQVVDRVQWFQ Rv2980|M.tuberculosis_H37Rv VAEPTTAGATAWRT-GPNSTPVILRCGLDRPAEFVVGSAIQVVDRVQWFQ MLBr_01677|M.leprae_Br4923 VAQPAPDAVAAWRT-GSDTEPVVLRCGLDGPAEFVVGSPIQAVDQVQWFE MAV_3831|M.avium_104 LEQPAPAGAAAWRT-GPDSEPVVLRCGLDRPAEFVAGSPIQVVDRVQWFA MMAR_1734|M.marinum_M MVQPAPQGTGAWSS-AAADEPVILRCGLDRPADFVVGSPIQVVDRVQWFR MUL_1977|M.ulcerans_Agy99 MVQPAPQGTGAWSS-AAADEPVILRCGLDRPADFVVGSPIQVVDRVQWFR TH_2050|M.thermoresistible__bu TVDPAPAGTAAWRR-GDD--TVILRCGLDRPADFVVGAPLQMVDDVQWFR MSMEG_2396|M.smegmatis_MC2_155 TVEPTPQGTAAWRG-AADMEPIILRCGLERPVDFVVGAPLQVVDLVQWFR MAB_3285|M.abscessus_ATCC_1997 IAEPKPPAAAAWRR---GQDSVIARCGVERPAEFAVGTSVEQVNGVQWFR :* . .. ** .:: ***:: *.:*..*:.:: *: *.** Mflv_4218|M.gilvum_PYR-GCK VGEAGAGNDRVGEAGAG-----ESGVAD--GDRSTWFAVDRPVYVALTLP Mvan_2149|M.vanbaalenii_PYR-1 VGEAGAGNDRVGEAGAGNDRVGEAGADDPAGERSTWFAVDRPVYVALTIP Mb3004|M.bovis_AF2122/97 VAAQ-------------------NPDEP---GRSTWYTVDRPVYVALTLP Rv2980|M.tuberculosis_H37Rv VAAQ-------------------NPDEP---GRSTWYTVDRPVYVALTLP MLBr_01677|M.leprae_Br4923 VDAKP-----------------KPAIDA---GRSTWYTVDRPVYVALTLP MAV_3831|M.avium_104 VRPDP-----------------QSAGDA---GRSTWYTVDRPVYVALTLP MMAR_1734|M.marinum_M VSDQT-----------------EAAGTATAGSRSTWYTVDRPVYVALTLP MUL_1977|M.ulcerans_Agy99 VSDQT-----------------EAAGTATAGSRSTWYTVDRPVYVALTLP TH_2050|M.thermoresistible__bu V---------------------------AEADRTTWYAVDRPLYVALTLP MSMEG_2396|M.smegmatis_MC2_155 VGDTGAAQP------------GDADAGAAEDTRSTWYAVDRPVYVALTLP MAB_3285|M.abscessus_ATCC_1997 VSDSA-------------------------LASTTWFAVDRGVYVAVTVP * :**::*** :***:*:* Mflv_4218|M.gilvum_PYR-GCK RDSGPTAIQTLSTIIAETLPAQTPQPAPLG- Mvan_2149|M.vanbaalenii_PYR-1 ADSGPTPIQTLSKIIADTLQSRPPDPAPIG- Mb3004|M.bovis_AF2122/97 SGSGPTAIQELSDVIDHTIPAVPIDPAPAR- Rv2980|M.tuberculosis_H37Rv SGSGPTAIQELSDVIDHTIPAVPIDPAPAR- MLBr_01677|M.leprae_Br4923 SGSGPTPIQELSDVIDRTLAAIPISPAQSH- MAV_3831|M.avium_104 SGSGPAPIQRLSDVIEQRIAAAPVNPGPPAG MMAR_1734|M.marinum_M AGSGPTPIQELSEIIDRAIAPVPIDPAPAG- MUL_1977|M.ulcerans_Agy99 AGSGPTPIQELSEIIDRAIAPAPIDPAPAG- TH_2050|M.thermoresistible__bu ADSGPSPIQGLSQTIAKVLPAKEIDPAPAR- MSMEG_2396|M.smegmatis_MC2_155 SGSGPTPIQLISGQIARAMPEKPVEPGPAR- MAB_3285|M.abscessus_ATCC_1997 DGAGSEPLVEMSDAIAKALPAVKPDPKPLPR .:*. .: :* * : .*