For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_1955 | recA | - | 100% (712) | RECA PROTEIN (RECOMBINASE A) |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2756c | recA | 1e-112 | 60.84% (383) | DNA recombination protein RecA |
| M. gilvum PYR-GCK | Mflv_3975 | recA | 1e-104 | 71.62% (296) | recA protein |
| M. tuberculosis H37Rv | Rv2737c | recA | 1e-112 | 60.84% (383) | DNA recombination protein RecA |
| M. leprae Br4923 | MLBr_00987 | recA | 0.0 | 85.39% (712) | RecA protein |
| M. abscessus ATCC 19977 | MAB_3060c | - | 1e-104 | 91.00% (211) | RecA protein |
| M. marinum M | MMAR_1977 | recA | 1e-105 | 91.00% (211) | recombinase A RecA |
| M. avium 104 | MAV_3627 | recA | 1e-105 | 92.42% (211) | protein RecA |
| M. smegmatis MC2 155 | MSMEG_2723 | recA | 1e-104 | 71.28% (296) | protein RecA |
| M. ulcerans Agy99 | MUL_3380 | recA | 1e-105 | 90.52% (211) | recombinase A |
| M. vanbaalenii PYR-1 | Mvan_2420 | recA | 1e-105 | 72.64% (296) | recA protein |
CLUSTAL 2.0.9 multiple sequence alignment
TH_1955|M.thermoresistible__bu -MAQAPDREKALELALAQIEKNHGKGSVMRLGDEARQPISVIPTGSIALD
MAB_3060c|M.abscessus_ATCC_199 -MAQAPDREKALELALAQIDKSFGKGSVMRLGDEVRQPISVIPTGSIALD
Mflv_3975|M.gilvum_PYR-GCK MAQQAPDREKALELALAQIDKNFGKGSVMRLGEDVRPPIAVIPTGSIALD
Mvan_2420|M.vanbaalenii_PYR-1 MAQQAPDREKALELALAQIDKNFGKGSVMRLGEEVRQPIAVIPTGSIALD
MLBr_00987|M.leprae_Br4923 -MAQVPDREKALELAMAQIEKNYGKGSVMRLGDEMCQPISVIPTGSIALD
MSMEG_2723|M.smegmatis_MC2_155 MAQQAPDREKALELAMAQIDKNFGKGSVMRLGEEVRQPISVIPTGSISLD
MAV_3627|M.avium_104 -MTQAPDREKALELAMAQIEKSYGKGSVMRLGDEMRQPISVIPTGSIALD
Mb2756c|M.bovis_AF2122/97 -MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALD
Rv2737c|M.tuberculosis_H37Rv -MTQTPDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALD
MUL_3380|M.ulcerans_Agy99 -MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISIIPTGSIALD
MMAR_1977|M.marinum_M -MAQAPDREKALELAMAQIEKSYGKGSVMRLGDEVRQPISIIPTGSIALD
*.**********:***:*..*********:: **::******:**
TH_1955|M.thermoresistible__bu VALGIGGLPRGRVVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHA
MAB_3060c|M.abscessus_ATCC_199 VALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQRAGGIAAFIDAEHA
Mflv_3975|M.gilvum_PYR-GCK VALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHA
Mvan_2420|M.vanbaalenii_PYR-1 VALGIGGLPRGRVVEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHA
MLBr_00987|M.leprae_Br4923 VALGIGGLPRGRIVEIYGPESSGKTTVALHAVANAQAVGGVAAFIDAEHA
MSMEG_2723|M.smegmatis_MC2_155 VALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHA
MAV_3627|M.avium_104 VALGIGGLPRGRVVEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHA
Mb2756c|M.bovis_AF2122/97 VALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHA
Rv2737c|M.tuberculosis_H37Rv VALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHA
MUL_3380|M.ulcerans_Agy99 VALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHA
MMAR_1977|M.marinum_M VALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHA
************::********************** .**:*********
TH_1955|M.thermoresistible__bu LDPEYAKKLGVDTDALLVSQPDTGEQALEIADMLIRSGALDILVVDSVAA
MAB_3060c|M.abscessus_ATCC_199 LDPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLVRSGAIDLIVIDSVAA
Mflv_3975|M.gilvum_PYR-GCK LDPDYAKKLGVDTDALLVSQPDTGEQALEIADMLIRSGALDILVIDSVAA
Mvan_2420|M.vanbaalenii_PYR-1 LDPDYAQKLGVDTDALLVSQPDTGEQALEIADMLIRSGALDILVIDSVAA
MLBr_00987|M.leprae_Br4923 LEPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRSGALDIVVIDSVAA
MSMEG_2723|M.smegmatis_MC2_155 LDPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLVRSGALDIIVIDSVAA
MAV_3627|M.avium_104 LDPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRSGALDILVIDSVAA
Mb2756c|M.bovis_AF2122/97 LDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRSGALDIVVIDSVAA
Rv2737c|M.tuberculosis_H37Rv LDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRSGALDIVVIDSVAA
MUL_3380|M.ulcerans_Agy99 LDPEYAKKLGVDTDSLLVSQPDTGEQALEIVDMLIRSGALDIVVIDSVAA
MMAR_1977|M.marinum_M LDPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLIRSGALDIVVIDSVAA
*:*:**:*******:***************.***:****:*::*:*****
TH_1955|M.thermoresistible__bu LVPRAEIEGEMGDSHVGLQARLMSQALRKITGALSNSGTTAIFINQLREK
MAB_3060c|M.abscessus_ATCC_199 LVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREK
Mflv_3975|M.gilvum_PYR-GCK LVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREK
Mvan_2420|M.vanbaalenii_PYR-1 LVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREK
MLBr_00987|M.leprae_Br4923 LVPRAELEGEMGDSYVGLQARLMSQALRKMTGALSNSGTTAIFINQLREK
MSMEG_2723|M.smegmatis_MC2_155 LVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREK
MAV_3627|M.avium_104 LVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREK
Mb2756c|M.bovis_AF2122/97 LVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLRDK
Rv2737c|M.tuberculosis_H37Rv LVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLRDK
MUL_3380|M.ulcerans_Agy99 LVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLRDK
MMAR_1977|M.marinum_M LVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLRDK
******:*******:**************:****.*************:*
TH_1955|M.thermoresistible__bu IGVMFGCFDYST--------------------------------RVQLAD
MAB_3060c|M.abscessus_ATCC_199 IGVMFG--------------------------------------------
Mflv_3975|M.gilvum_PYR-GCK IGVMFG--------------------------------------------
Mvan_2420|M.vanbaalenii_PYR-1 IGVMFG--------------------------------------------
MLBr_00987|M.leprae_Br4923 IGVMFGCMNYST--------------------------------RVTLAD
MSMEG_2723|M.smegmatis_MC2_155 IGVMFG--------------------------------------------
MAV_3627|M.avium_104 IGVMFG--------------------------------------------
Mb2756c|M.bovis_AF2122/97 IGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVK
Rv2737c|M.tuberculosis_H37Rv IGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTRVKVVK
MUL_3380|M.ulcerans_Agy99 IGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVK
MMAR_1977|M.marinum_M IGVMFGSPETTTGGKALKFYASVRMDVRRIETLKDGTNAVGNRTRVKIVK
******
TH_1955|M.thermoresistible__bu GTTEKIGKIVDNKMDVEVLSYDPDTDRIVPRKVVNWFNNGPAEQFLQFTV
MAB_3060c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_3975|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2420|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_00987|M.leprae_Br4923 GSTEKIGKIVNNKMDVRVLSYDPVTDRIVPRKVVNWFNNGPAEQFLQFTV
MSMEG_2723|M.smegmatis_MC2_155 --------------------------------------------------
MAV_3627|M.avium_104 --------------------------------------------------
Mb2756c|M.bovis_AF2122/97 NKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSW
Rv2737c|M.tuberculosis_H37Rv NKCLAEGTRIFDPVTGTTHRIEDVVDGRKPIHVVAAAKDGTLHARPVVSW
MUL_3380|M.ulcerans_Agy99 N-------------------------------------------------
MMAR_1977|M.marinum_M N-------------------------------------------------
TH_1955|M.thermoresistible__bu EKSGGN--------GRARFAATPNHLIRTPGGWTEAGDLIAGDRVLAAEP
MAB_3060c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_3975|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2420|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_00987|M.leprae_Br4923 EKSGSN--------GKSQFAATPNHLIRTPGGWTEAGNLIAGDRVLAVEP
MSMEG_2723|M.smegmatis_MC2_155 --------------------------------------------------
MAV_3627|M.avium_104 --------------------------------------------------
Mb2756c|M.bovis_AF2122/97 FDQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRR
Rv2737c|M.tuberculosis_H37Rv FDQGTRDVIGLRIAGGAIVWATPDHKVLTEYGWRAAGELRKGDRVAQPRR
MUL_3380|M.ulcerans_Agy99 --------------------------------------------------
MMAR_1977|M.marinum_M --------------------------------------------------
TH_1955|M.thermoresistible__bu HRLSDQQFQIVLGSLMGDGTLSPDPRGRNGVRFRMG-HGADRVDYLEWKT
MAB_3060c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_3975|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2420|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_00987|M.leprae_Br4923 HMLSDQQFQVVLGSLMGDGNLSPNLCDRNGVRFRLLGYGCKQVEYLQWKK
MSMEG_2723|M.smegmatis_MC2_155 --------------------------------------------------
MAV_3627|M.avium_104 --------------------------------------------------
Mb2756c|M.bovis_AF2122/97 FDGFGDSAPIPADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVT
Rv2737c|M.tuberculosis_H37Rv FDGFGDSAPIPADHARLLGYLIGDGRDGWVGGKTPINFINVQRALIDDVT
MUL_3380|M.ulcerans_Agy99 --------------------------------------------------
MMAR_1977|M.marinum_M --------------------------------------------------
TH_1955|M.thermoresistible__bu ALLGNIKHSTGENAEGARFVDFTPLPELAELRRAVYLGDDGRKFISEEYL
MAB_3060c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_3975|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2420|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_00987|M.leprae_Br4923 ALMGNIRHTVRENSMGASFIDFTPLPELVELQRAVYLGD-GKKFLSEEYL
MSMEG_2723|M.smegmatis_MC2_155 --------------------------------------------------
MAV_3627|M.avium_104 --------------------------------------------------
Mb2756c|M.bovis_AF2122/97 RIAATLGCAAHPQGRISLAIAHRPGERNGVADLCQQAGIYGKLAWEKTIP
Rv2737c|M.tuberculosis_H37Rv RIAATLGCAAHPQGRISLAIAHRPGERNGVADLCQQAGIYGKLAWEKTIP
MUL_3380|M.ulcerans_Agy99 --------------------------------------------------
MMAR_1977|M.marinum_M --------------------------------------------------
TH_1955|M.thermoresistible__bu KALTPLALAIWYMDDGSLTV-RSEGLQQGTAGGSGRIEICVEAMTEGSRI
MAB_3060c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_3975|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2420|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_00987|M.leprae_Br4923 KALTPLVLAIWYMDDGSFTV-GSKRVQERTAGGSGRIEICVDAMTEGTRV
MSMEG_2723|M.smegmatis_MC2_155 --------------------------------------------------
MAV_3627|M.avium_104 --------------------------------------------------
Mb2756c|M.bovis_AF2122/97 NWFFEPDIAADIVGNLLFGLFESDGWVSREQTGALRVGYTTTSEQLAHQI
Rv2737c|M.tuberculosis_H37Rv NWFFEPDIAADIVGNLLFGLFESDGWVSREQTGALRVGYTTTSEQLAHQI
MUL_3380|M.ulcerans_Agy99 --------------------------------------------------
MMAR_1977|M.marinum_M --------------------------------------------------
TH_1955|M.thermoresistible__bu RLRDHLRDTHGLDVRLRQAGAGGKAVLVFSTAATAEFQELVAPYMAPSME
MAB_3060c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_3975|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2420|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_00987|M.leprae_Br4923 RLRDYLCDTHGLDVRLREVGSAGKAVLVFSTAATAKFQSLIAPYVAPSME
MSMEG_2723|M.smegmatis_MC2_155 --------------------------------------------------
MAV_3627|M.avium_104 --------------------------------------------------
Mb2756c|M.bovis_AF2122/97 HWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVRISGMDNVTA
Rv2737c|M.tuberculosis_H37Rv HWLLLRFGVGSTVRDYDPTQKRPSIVNGRRIQSKRQVFEVRISGMDNVTA
MUL_3380|M.ulcerans_Agy99 --------------------------------------------------
MMAR_1977|M.marinum_M --------------------------------------------------
TH_1955|M.thermoresistible__bu YKLLPRFRGQSRVVPQFVEPTQRLVPARILDVHVEPHTRSMNRYDIEVEG
MAB_3060c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_3975|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2420|M.vanbaalenii_PYR-1 --------------------------------------------------
MLBr_00987|M.leprae_Br4923 YKLLPQFRGRGSVTPQFVEPTQQLVPARVLDVHVKLSTRSMNRFDIEVEG
MSMEG_2723|M.smegmatis_MC2_155 --------------------------------------------------
MAV_3627|M.avium_104 --------------------------------------------------
Mb2756c|M.bovis_AF2122/97 FAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDER
Rv2737c|M.tuberculosis_H37Rv FAESVPMWGPRGAALIQAIPEATQGRRRGSQATYLAAEMTDAVLNYLDER
MUL_3380|M.ulcerans_Agy99 --------------------------------------------------
MMAR_1977|M.marinum_M --------------------------------------------------
TH_1955|M.thermoresistible__bu NHNYFVDGVMVHNSPETTTGG---------------KALK----------
MAB_3060c|M.abscessus_ATCC_199 -------------SPETTTGG---------------KALK----------
Mflv_3975|M.gilvum_PYR-GCK -------------SPETTTGG---------------KALK----------
Mvan_2420|M.vanbaalenii_PYR-1 -------------SPETTTGG---------------KALK----------
MLBr_00987|M.leprae_Br4923 NHNYFVDGVMVHNSPETTTGG---------------KALK----------
MSMEG_2723|M.smegmatis_MC2_155 -------------SPETTTGG---------------KALK----------
MAV_3627|M.avium_104 -------------SPETTTGG---------------KALK----------
Mb2756c|M.bovis_AF2122/97 GVTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHD
Rv2737c|M.tuberculosis_H37Rv GVTAQEAAAMIGVASGDPRGGMKQVLGASRLRRDRVQALADALDDKFLHD
MUL_3380|M.ulcerans_Agy99 --------------------------------------------------
MMAR_1977|M.marinum_M --------------------------------------------------
TH_1955|M.thermoresistible__bu ------FYASVR--IDVRRIETLKDGTEAVGNRTRAKIVKNKVSPPFKQA
MAB_3060c|M.abscessus_ATCC_199 ------FYSSVR--LDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQA
Mflv_3975|M.gilvum_PYR-GCK ------FYSSVR--LDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQA
Mvan_2420|M.vanbaalenii_PYR-1 ------FYASVR--MDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQA
MLBr_00987|M.leprae_Br4923 ------FYASVR--MDVRRIETLKDGVDAVGNRTRVKIVKNKVSPPFKQA
MSMEG_2723|M.smegmatis_MC2_155 ------FYASVR--LDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQA
MAV_3627|M.avium_104 ------FYASVR--MDVRRIETLKDGTNAVGNRTRVKIVKNKVSPPFKQA
Mb2756c|M.bovis_AF2122/97 MLAEELRYSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQA
Rv2737c|M.tuberculosis_H37Rv MLAEELRYSVIREVLPTRRARTFDLEVEELHTLVAEGVVVHNCSPPFKQA
MUL_3380|M.ulcerans_Agy99 -----------------------------------------KVSPPFKQA
MMAR_1977|M.marinum_M -----------------------------------------KVSPPFKQA
: *******
TH_1955|M.thermoresistible__bu EFDILYGKGISKEGSLIDMGVEQGFIRKSGSWYTYEGEQLGQGKENARNF
MAB_3060c|M.abscessus_ATCC_199 EFDILYGKGISKEGSLIDMGVEQGFIRKSGSWFTYEGEQLGQGKENARNF
Mflv_3975|M.gilvum_PYR-GCK EFDILYGKGISREGSLIDMGVEQGFIRKSGSWFTYDGEQLGQGKENARNF
Mvan_2420|M.vanbaalenii_PYR-1 EFDILYGKGISREGSLIDMGVEHGFIRKSGSWFTYDGEQLGQGKENARNF
MLBr_00987|M.leprae_Br4923 EFDILYGKGISREGSLIDMGVEQGFVRKSGSWFTYEGEQLGQGKENARNF
MSMEG_2723|M.smegmatis_MC2_155 EFDILYGQGISREGSLIDMGVEHGFIRKSGSWFTYEGEQLGQGKENARKF
MAV_3627|M.avium_104 EFDILYGRGISREGSLIDMGVDQGFIRKSGSWFTYEGEQLGQGKENARTF
Mb2756c|M.bovis_AF2122/97 EFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNF
Rv2737c|M.tuberculosis_H37Rv EFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENARNF
MUL_3380|M.ulcerans_Agy99 EFDILYGRGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENARNF
MMAR_1977|M.marinum_M EFDILYGRGISREGSLIDMGVDQGFIRKSGAWFTYEGEQLGQGKENARNF
*******:***:*********::*::****:*:**:************.*
TH_1955|M.thermoresistible__bu LIENVDVANEIEKKIKEKLGIGPVITD----DEALPAPVDF
MAB_3060c|M.abscessus_ATCC_199 LLENVDVANEIEKKIKEKLGIGAVLTD----DEVVPAPVDF
Mflv_3975|M.gilvum_PYR-GCK LLQNPDVGNEIEKKIKEKLGIGAQLTDDVA-DDALPAPVDF
Mvan_2420|M.vanbaalenii_PYR-1 LLQNVDVANEIEKKIKEKLGIGAQLTDDAN-DDALPAPVDF
MLBr_00987|M.leprae_Br4923 LLENADVANEIEKKIKEKLGIGAVVTD----DDILPTPVDF
MSMEG_2723|M.smegmatis_MC2_155 LLENTDVANEIEKKIKEKLGIGAVVTAEA--DDVLPAPVDF
MAV_3627|M.avium_104 LMENDEVANEIEKKIKEKLGIGAVVTDDLSDDGVLPAPVDF
Mb2756c|M.bovis_AF2122/97 LVENADVADEIEKKIKEKLGIGAVVTDDPSNDGVLPAPVDF
Rv2737c|M.tuberculosis_H37Rv LVENADVADEIEKKIKEKLGIGAVVTDDPSNDGVLPAPVDF
MUL_3380|M.ulcerans_Agy99 LLENGGVANEIEKKIKEKLGIGAVVTDD----GVLPAPVDF
MMAR_1977|M.marinum_M LLENGEVANEIEKKIKEKLGIGAVVTDD----GVLPAPVDF
*::* *.:*************. :* :*:****