For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_1589 | - | 100% (383) | CONSERVED HYPOTHETICAL PROTEIN | |
M. thermoresistible (build 8) | TH_1574 | - | 4e-93 | 55.70% (298) | CONSERVED HYPOTHETICAL PROTEIN |
M. thermoresistible (build 8) | TH_4628 | - | 1e-44 | 37.86% (280) | PUTATIVE conserved hypothetical protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1672c | - | 1e-164 | 78.17% (339) | hypothetical protein Mb1672c |
M. gilvum PYR-GCK | Mflv_3536 | - | 1e-170 | 77.87% (348) | hypothetical protein Mflv_3536 |
M. tuberculosis H37Rv | Rv1645c | - | 1e-164 | 78.17% (339) | hypothetical protein Rv1645c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0757 | - | 8e-93 | 54.49% (301) | hypothetical protein MAB_0757 |
M. marinum M | MMAR_2452 | - | 1e-163 | 80.72% (332) | hypothetical protein MMAR_2452 |
M. avium 104 | MAV_3124 | - | 1e-163 | 78.95% (342) | hypothetical protein MAV_3124 |
M. smegmatis MC2 155 | MSMEG_3781 | - | 1e-170 | 82.04% (334) | hypothetical protein MSMEG_3781 |
M. ulcerans Agy99 | MUL_1631 | - | 1e-161 | 79.52% (332) | hypothetical protein MUL_1631 |
M. vanbaalenii PYR-1 | Mvan_3322 | - | 1e-166 | 79.15% (331) | hypothetical protein Mvan_3322 |
CLUSTAL 2.0.9 multiple sequence alignment Mb1672c|M.bovis_AF2122/97 ------------MTVAS--------------------------------- Rv1645c|M.tuberculosis_H37Rv ------------MTVAS--------------------------------- MMAR_2452|M.marinum_M ------------MTATS--------------------------------- MUL_1631|M.ulcerans_Agy99 ------------MTATS--------------------------------- MAV_3124|M.avium_104 ------------MTGRS--------------------------------- Mflv_3536|M.gilvum_PYR-GCK ------------MANDSLSPEGSETPEG------------------AAQP Mvan_3322|M.vanbaalenii_PYR-1 ------------MADS---------------------------------P MSMEG_3781|M.smegmatis_MC2_155 ------------MATR-------------------------------ATS TH_1589|M.thermoresistible__bu -VTEQLGLCEVPMAAKSTTSRNRRSDAGGAGAQDFPADTPRPEPRPGPSG MAB_0757|M.abscessus_ATCC_1997 MVNDMSELAKVQPAAESGAFVSGCPVSHG--------------------T : Mb1672c|M.bovis_AF2122/97 -RTSADPLGPDSLTWKYFGDLRTGMMGVWIGAIQNMYPELGAGVEEHSIL Rv1645c|M.tuberculosis_H37Rv -RTSADPLGPDSLTWKYFGDLRTGMMGVWIGAIQNMYPELGAGVEEHSIL MMAR_2452|M.marinum_M -PPAANPLGPDSLTWKYFGDLRTGMMGVWIGAIQNMYPELGAGVTEHSIL MUL_1631|M.ulcerans_Agy99 -PPAANPLGPDSLTWKYFGDLRIGMMGVWIGAIQNMYPELGAGVTEHSIL MAV_3124|M.avium_104 -TTAADPLGPDSLTWKYFGDLRTGMMGVWIGAIQNMYPELGAGVQEHSIL Mflv_3536|M.gilvum_PYR-GCK QAPGAFPLGPDSLTWKYFGDVRTGILGVWIGAIQNMYPQLGAGVEDHSIL Mvan_3322|M.vanbaalenii_PYR-1 PAAGADPLGPDSLTWKYFGDVRTGMLGVWVGAIQNMYPQLGAGVEDHSIL MSMEG_3781|M.smegmatis_MC2_155 TDTASDPLGLDSLTWKYFGDLRTGMLGVWIGAIQNMYPELGAGVEEHSIL TH_1589|M.thermoresistible__bu TTPAAQPLGPDSLTWKYFGDLRTGLLGVWIGAIQNMYPELGAGVTDHSIV MAB_0757|M.abscessus_ATCC_1997 GKSMPVPLGPESLTWKYFGDWRGMLQGPYAGSMQNMHPQLGAAVEQHSQF . . *** :********* * : * : *::***:*:***.* :** . Mb1672c|M.bovis_AF2122/97 LREPLQRVARSVYPIMGVVYDGDRAAQTGQQIKGYHRTIKGVDAEGRRYH Rv1645c|M.tuberculosis_H37Rv LREPLQRVARSVYPIMGVVYDGDRAAQTGQQIKGYHRTIKGVDAEGRRYH MMAR_2452|M.marinum_M LREPLQRVARSVYPIMGVVYDGDRAAQTGQQIKGYHRTIKGVDADGRRYH MUL_1631|M.ulcerans_Agy99 LREPLQRVARSVYPIMGVVYDGDRAAQTGQQIKGYHRTIKGVDADGRRYH MAV_3124|M.avium_104 LREPLQRVARSVYPIMGVVYDGDRAPQTGRQITSYHHTIKGTDASGRRYH Mflv_3536|M.gilvum_PYR-GCK MREPLQRVARSVYPIMGVVYDGDRAAQTGAQIRGYHKTIKGVDADGRRYH Mvan_3322|M.vanbaalenii_PYR-1 LREPLQRVARSVYPIMGVVYDGDRAAQTGAQIRGFHKTIKGADSDGRRYH MSMEG_3781|M.smegmatis_MC2_155 LREPLQRVARSVYPIMGVVYDGDRAPETGAQIKGFHKTIKGVDSSGRRYH TH_1589|M.thermoresistible__bu LQEPLQRVARSVYPIMGVVYDGDRAPLTGAQIKSYHRDIKGVDAAGRRYH MAB_0757|M.abscessus_ATCC_1997 FRERWQRLLRSLYPIGGVVFDGDRAPMTGAEVRDYHVNIKGVDDQGRRYS ::* **: **:*** ***:*****. ** :: .:* ***.* **** Mb1672c|M.bovis_AF2122/97 ALNPDTFYWAHATFFMLVIKVAEYFCGGLTEAEKHQLFEEHVRWYRMYGM Rv1645c|M.tuberculosis_H37Rv ALNPDTFYWAHATFFMLVIKVAEYFCGGLTEAEKHQLFEEHVRWYRMYGM MMAR_2452|M.marinum_M ALNPETFYWAHATFFMLVVKVAEYFCGGLTEAEKRQLFDEHVQWYRMYGM MUL_1631|M.ulcerans_Agy99 ALNPETFYWAHATFFMLVVKVAEYFCGGLTEAEKRQLFDEYVQWYRMYGM MAV_3124|M.avium_104 ALNPDTFYWAHATFFMLIIKVAEYFCGGLTEAEKRQLFDEHVQWYRMYGM Mflv_3536|M.gilvum_PYR-GCK ALNPETFYWAHATFFMLIIKTAEYFCGGLTEAEKEQLFDEHVQWYRMYGM Mvan_3322|M.vanbaalenii_PYR-1 ALNPETFYWAHATFFMLIIKTAEYFCGGLTEAEKRQLFDEHVQWYRMYGM MSMEG_3781|M.smegmatis_MC2_155 ALNPETFYWAHATFFMLIIKTAEYFCGGLTEAEKRQLFDEHVQWYRMYGM TH_1589|M.thermoresistible__bu ALNPETFYWAHATFFMLILKTAEYFCGGLTEAEKHQLFDEHVRWYRMYGM MAB_0757|M.abscessus_ATCC_1997 ALNPDVFYWAHATFFMGTIIVAERFCGGITEAEKRQLFDEHITWYQMYGM ****:.********** : .** ****:*****.***:*:: **:**** Mb1672c|M.bovis_AF2122/97 SMRPVPKSWEDFQDYWDRVCRDKLEINQATVDILQMR-IPKPRFV-LMPT Rv1645c|M.tuberculosis_H37Rv SMRPVPKSWEDFQDYWDRVCRDKLEINQATVDILQMR-IPKPRFV-LMPT MMAR_2452|M.marinum_M SMRPVPETWEDFQDFWERVGRDELEINQATLDIFNMR-IPKPKFV-LMPT MUL_1631|M.ulcerans_Agy99 SMRPVPETWEDFQDFWERVGRDELEINQATLDIFNMR-IPKPKFV-LMPI MAV_3124|M.avium_104 SMRPVPKSWEEFQEYWERTGREVLEINQATLDIFRMR-IPKPKFV-LMPT Mflv_3536|M.gilvum_PYR-GCK SMAPVPESWQAFCEYWDRKCREELEINSATLDILSMR-IPKPWFV-LMPT Mvan_3322|M.vanbaalenii_PYR-1 SMQPVPESWEAFCEYWDRKCREELEINKATLDIFSMR-IPKPWFV-MMPT MSMEG_3781|M.smegmatis_MC2_155 SMRPVPQTWEEFQDYWDAKCRDELEINRATLDIFSIR-IPKPWFV-LMPT TH_1589|M.thermoresistible__bu SMRPVPRTWEEFCEYWDRTCREQLEINQAALDILHIR-IPKPWFV-LMPT MAB_0757|M.abscessus_ATCC_1997 SMRPVPKSWEEFQEYWDHMCTNVLEDNKATRDVLDLTTLAVPPFAPWIPK ** ***.:*: * ::*: : ** * *: *:: : :. * *. :* Mb1672c|M.bovis_AF2122/97 PIWDQLFKPLIAGQRWIAAGLFDPAVREKAGMHWTPGDEVLLRVFGKVVE Rv1645c|M.tuberculosis_H37Rv PIWDQLFKPLIAGQRWIAAGLFDPAVREKAGMHWTPGDEVLLRVFGKVVE MMAR_2452|M.marinum_M GIWDQLFRPLVAGQRWIAAGLFEPAVREKAGMHWTQGDEVLLRLFGKAVE MUL_1631|M.ulcerans_Agy99 GIWDQLFRPLVAGQRWIAAGLFEPAVREKAGMHWTQGDEVLLRLFGKAVE MAV_3124|M.avium_104 PLWDQLFRPLVAGQRWIAAGLFEPAVREKAGMHWTPGDEVLLRLFGKIVE Mflv_3536|M.gilvum_PYR-GCK PVWDQMFKPMIGAQRWIAAGVFDPVVRERAGMRWTPGDEIVLRLFGKMVE Mvan_3322|M.vanbaalenii_PYR-1 PLWDQIFKPMVGAQRWIAAGVFDPVVRERAGMRWTPGDEIVLRLFGKLVE MSMEG_3781|M.smegmatis_MC2_155 PIWDQLFKPLVGAQRWIAAGLFDPVVREKAGMRWTPGDEVLLRIFGKAVE TH_1589|M.thermoresistible__bu PVWDQLFRPLLAGQRWVAAGVFEPVLREKAGMRWTPGDEVLLRLFGKLVE MAB_0757|M.abscessus_ATCC_1997 WLWALQRRMLSPFFVWFTVGLYDPPVRKRLGYTWSDRDEWLHRSFGRLVN :* : : *.:.*:::* :*:: * *: ** : * **: *: Mb1672c|M.bovis_AF2122/97 LAFLAVPDEIRLHPRALAAYRRAAGRTRHDAPLVQAPGFMAPPRDRQGLP Rv1645c|M.tuberculosis_H37Rv LAFLAVPDEIRLHPRALAAYRRAAGRTRHDAPLVQAPGFMAPPRDRQGLP MMAR_2452|M.marinum_M LAFLAVPDEIRLHPRALAAYRRAEGRVKRDAPLVEAPSFMAPPSDRRGLP MUL_1631|M.ulcerans_Agy99 LAFLAVPDEIRLHPRALAAYRRAEGRVKRDAPLVEAPSFMAPPSDRRGLP MAV_3124|M.avium_104 LAFLAVPDEIRLHPRALAAYRREQGRLPSDAPLVEAPPFMAPPRDRRGLP Mflv_3536|M.gilvum_PYR-GCK LAFVAVPDEIRLHPRAVAAYRRAEGKVPADAPLVEAPAFMAPPRDRRSMP Mvan_3322|M.vanbaalenii_PYR-1 LAFLAVPDEIRLHPRAVAAYRRAEGKIPADAPLVEAPAFMAPPRDRRHMP MSMEG_3781|M.smegmatis_MC2_155 LAFLAVPDEIRLHPRAVSAYRRAKGRIPADAPLVEAPGFTAPPKDRRGLP TH_1589|M.thermoresistible__bu LAFVAVPDEIRLHPRALSAYRRASGRIPADAPLVEAPAFTGPPGDRRGLP MAB_0757|M.abscessus_ATCC_1997 VVFRFVPERFRRHPRARAGWDRALGRIPADAPLPQTPDRNLPPLDTWGSP :.* **:.:* **** :.: * *: **** ::* ** * * Mb1672c|M.bovis_AF2122/97 MHYFPPRSHRFTRSALDPAKALMERAGALVHSTLSLAGVRPARGPSRAA- Rv1645c|M.tuberculosis_H37Rv MHYFPPRSHRFTRSALDPAKALMERAGALVHSTLSLAGVRPARGPSRAA- MMAR_2452|M.marinum_M MHYFPPRAH--------PAKVLLERAGSLVHSTLSIAGLRPARGRSRTTT MUL_1631|M.ulcerans_Agy99 MHYFPPRAH--------PAKVLLERAGSLVHSTLSIAGLQPARGRSRTTT MAV_3124|M.avium_104 MHYFPPPPRLPFDPALQPARALMERAGSLVHTTLSLAGLRAGRGRPKRPV Mflv_3536|M.gilvum_PYR-GCK MHYLP------------PRKTLLDRVGSLVHSTFSLAGRRPARGTG---K Mvan_3322|M.vanbaalenii_PYR-1 MHYLP------------PQKSLLDRVGSLVHTTFSLAGVRPARKPG---K MSMEG_3781|M.smegmatis_MC2_155 MHYLP------------QRRSLLDRAGALVHSTLSLPALRPAKKSSPRRS TH_1589|M.thermoresistible__bu MHYVP------------RRRSLIERAGALVHSTFSLAGLRPARGSAA--- MAB_0757|M.abscessus_ATCC_1997 NHYNP---------------------------KVS--------------- ** * ..* Mb1672c|M.bovis_AF2122/97 --- Rv1645c|M.tuberculosis_H37Rv --- MMAR_2452|M.marinum_M AA- MUL_1631|M.ulcerans_Agy99 AA- MAV_3124|M.avium_104 RAA Mflv_3536|M.gilvum_PYR-GCK AA- Mvan_3322|M.vanbaalenii_PYR-1 AA- MSMEG_3781|M.smegmatis_MC2_155 AA- TH_1589|M.thermoresistible__bu --- MAB_0757|M.abscessus_ATCC_1997 ---