For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0803 | nrdG | - | 100% (329) | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2 (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R2F PROTEIN) |
| M. thermoresistible (build 8) | TH_1825 | nrdG | e-125 | 65.61% (314) | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (BETA CHAIN) NRDF2 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2003c | nrdF1 | 1e-132 | 68.45% (317) | ribonucleotide-diphosphate reductase subunit beta |
| M. gilvum PYR-GCK | Mflv_4286 | nrdF | 1e-124 | 64.65% (314) | ribonucleotide-diphosphate reductase subunit beta |
| M. tuberculosis H37Rv | Rv1981c | nrdF1 | 1e-132 | 68.45% (317) | ribonucleotide-diphosphate reductase subunit beta |
| M. leprae Br4923 | MLBr_01731 | nrdF | 1e-128 | 67.20% (314) | ribonucleotide-diphosphate reductase subunit beta |
| M. abscessus ATCC 19977 | MAB_3404c | nrdF | 1e-128 | 66.25% (317) | ribonucleotide-diphosphate reductase subunit beta |
| M. marinum M | MMAR_1647 | nrdF | 1e-125 | 65.61% (314) | ribonucleoside-diphosphate reductase (beta chain) NrdF2 |
| M. avium 104 | MAV_3913 | nrdF | 1e-123 | 64.33% (314) | ribonucleotide-diphosphate reductase subunit beta |
| M. smegmatis MC2 155 | MSMEG_2313 | nrdF2 | 1e-124 | 64.65% (314) | ribonucleotide-diphosphate reductase subunit beta |
| M. ulcerans Agy99 | MUL_1883 | nrdF | 1e-126 | 65.61% (314) | ribonucleotide-diphosphate reductase subunit beta |
| M. vanbaalenii PYR-1 | Mvan_2060 | nrdF | 1e-124 | 64.65% (314) | ribonucleotide-diphosphate reductase subunit beta |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1647|M.marinum_M ----MTGNAKLIDRVSAINWNRVQDEKDAEVWDRLTGNFWLPEKVPVSND
MUL_1883|M.ulcerans_Agy99 ----MTGNAKLIDRVSAINWNRVQDEKDAEVWDRLTGNFWLPEKVPVSND
MLBr_01731|M.leprae_Br4923 ---MLTGKMKLIDRVSAINWNWLQDDKDAEVWDRLTGNFWLPEKVPVSND
Mflv_4286|M.gilvum_PYR-GCK --------MKLIDRVSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSND
Mvan_2060|M.vanbaalenii_PYR-1 ----MSDGMKLIDRVSAINWNRLQDDKDAEVWERLTGNFWLPEKVPVSND
MAV_3913|M.avium_104 ----MSENMKLIDRLSAINWNRLQDDKDAEVWDRLTGNFWLPEKVPVSND
MSMEG_2313|M.smegmatis_MC2_155 ----MSDGIKLIDRVSAINWNRLQDEKDAEVWHRLTGNFWLPEKVPVSND
MAB_3404c|M.abscessus_ATCC_199 ----MSEKLKLVSRVSAINWNRVPDEKDAEVWDRLTGNFWLPEKVPVSND
Mb2003c|M.bovis_AF2122/97 ----MTG--KRVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSND
Rv1981c|M.tuberculosis_H37Rv ----MTG--KLVERVHAINWNRLLDAKDLQVWERLTGNFWLPEKIPLSND
TH_0803|M.thermoresistible__bu MTELAEKTTTDVAPLEAINWNDVTDQKDIEVWNRLTANFWLPEKVPLSND
. : : ***** : * ** :**.***.*******:*:***
MMAR_1647|M.marinum_M IPSWGTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVL
MUL_1883|M.ulcerans_Agy99 IPSWGTLTAGEKQLTMRVFTGLTMLDTIQGTVGAVSLIPDALTPHEEAVL
MLBr_01731|M.leprae_Br4923 LPSWGTLTASEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVY
Mflv_4286|M.gilvum_PYR-GCK IPSWNTLTAHEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVY
Mvan_2060|M.vanbaalenii_PYR-1 IPSWNTLTAHEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVY
MAV_3913|M.avium_104 LQSWATLTAHEKQMTMRVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVY
MSMEG_2313|M.smegmatis_MC2_155 IQSWHTLTDNEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAVTPHEEAVL
MAB_3404c|M.abscessus_ATCC_199 IQSWNTLTDHEKQLTMRVFTGLTLLDTIQGTVGAVSLIPDAITPHEEAVY
Mb2003c|M.bovis_AF2122/97 LASWQTLSSTEQQTTIRVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVL
Rv1981c|M.tuberculosis_H37Rv LASWQTLSSTEQQTTIRVFTGLTLLDTAQATVGAVAMIDDAVTPHEEAVL
TH_0803|M.thermoresistible__bu LPSWRTLTPEQQQLTVRVFTGLTLLDTMQGTVGCIEMLADSKTQHEEAVY
: ** **: ::* *:*******:*** *.***.: :: *: * *****
MMAR_1647|M.marinum_M TNIAFMESVHAKSYSQIFSTLCSTAEIDDAFRWSEENSNLQRKAEIVLEY
MUL_1883|M.ulcerans_Agy99 TNIAFMESVHAKSYSQIFSTLCSTAEIDDAFRWSEENSNLQRKAEIVLEY
MLBr_01731|M.leprae_Br4923 TNIAFMESVHAKSYSSIFSTLCSTAEIDEAFRWSEENNNLQRKAKIVMEY
Mflv_4286|M.gilvum_PYR-GCK TNIAFMESVHARSYSNIFSTLCSTSEIDDAFRWSEENPNLQRKAEIVMQY
Mvan_2060|M.vanbaalenii_PYR-1 TNIAFMESVHARSYSNIFSTLCSTAEIDDAFRWSEENPNLQRKAEIVMQY
MAV_3913|M.avium_104 TNIAFMESVHARSYSNIFSTLCSTAEIDDAFRWSEENPNLQRKAEIVMQY
MSMEG_2313|M.smegmatis_MC2_155 TNIAFMESVHAKSYSNIFSTLCSTAEIDDAFRWSEENPNLQRKAAIVMQY
MAB_3404c|M.abscessus_ATCC_199 TNIAFMESVHAKSYSSIFSTLCSTREIDDAFRWSEENPNLQRKAEIVMEY
Mb2003c|M.bovis_AF2122/97 TNMAFMESVHAKSYSSIFSTLCSTKQIDDAFDWSEQNPYLQRKAQIIVDY
Rv1981c|M.tuberculosis_H37Rv TNMAFMESVHAKSYSSIFSTLCSTKQIDDAFDWSEQNPYLQRKAQIIVDY
TH_0803|M.thermoresistible__bu TNMAFMESVHAKSYSSIFSTLCSTREITEAFEWSRTNRFLQRKARIVHDY
**:********:***.******** :* :** **. * ***** *: :*
MMAR_1647|M.marinum_M YRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRD
MUL_1883|M.ulcerans_Agy99 YRGDDPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRD
MLBr_01731|M.leprae_Br4923 YRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRD
Mflv_4286|M.gilvum_PYR-GCK YKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRD
Mvan_2060|M.vanbaalenii_PYR-1 YKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRD
MAV_3913|M.avium_104 YKGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRD
MSMEG_2313|M.smegmatis_MC2_155 YRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRD
MAB_3404c|M.abscessus_ATCC_199 YRGDEPLKRKVASTLLESFLFYSGFYLPMYWSSRAKLTNTADMIRLIIRD
Mb2003c|M.bovis_AF2122/97 YRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTNTADLIRLIIRD
Rv1981c|M.tuberculosis_H37Rv YRGDDALKRKASSVMLESFLFYSGFYLPMYWSSRGKLTNTADLIRLIIRD
TH_0803|M.thermoresistible__bu YRGDDALKKKISSVMLESFMFYSGFYLPLYWSTRSILTNTADIIRLIIRD
*:**:.**:* :*.:****:********:***:*. ******:*******
MMAR_1647|M.marinum_M EAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVEYTQDLY
MUL_1883|M.ulcerans_Agy99 EAVHGYYIGYKFQRGLAAADEARRTELKDYTYELLFELYDNEVEYTQDLY
MLBr_01731|M.leprae_Br4923 EAVHGYYIGYKFQRGLVLVDDARRAELKEYTYELLFELYDNEVEYTQDLY
Mflv_4286|M.gilvum_PYR-GCK EAVHGYYIGYKFQKGLALADDATRQELKDYTYELLFELYDNEVEYTQDLY
Mvan_2060|M.vanbaalenii_PYR-1 EAVHGYYIGYKFQKGLALESEATRQELKDYTYELLFELYDNEVEYTQDLY
MAV_3913|M.avium_104 EAVHGYYIGYKYQRGLALVDDAKRQELKDYTYELLFELYDNEVEYTQDLY
MSMEG_2313|M.smegmatis_MC2_155 EAVHGYYIGYKYQRGLALVDEEKKQELKDYTYELLFELYDNEVEYTQDLY
MAB_3404c|M.abscessus_ATCC_199 EAVHGYYIGYKFQRGLERVDEAKRAEIKEYTYDLLYELYENETDYTEDLY
Mb2003c|M.bovis_AF2122/97 EAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLY
Rv1981c|M.tuberculosis_H37Rv EAVHGYYIGYKCQRGLADLTDAERADHREYTCELLHTLYANEIDYAHDLY
TH_0803|M.thermoresistible__bu EAIHGHYIGYKFQLGYNESTPERQADLQEFAYDMLTELYENEVDYAHDLY
**:**:***** * * : : :::: ::* ** ** :*:.***
MMAR_1647|M.marinum_M DEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNAD
MUL_1883|M.ulcerans_Agy99 DEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNAD
MLBr_01731|M.leprae_Br4923 DRVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNAD
Mflv_4286|M.gilvum_PYR-GCK DEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNAD
Mvan_2060|M.vanbaalenii_PYR-1 DEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNAD
MAV_3913|M.avium_104 DEVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALSPNAD
MSMEG_2313|M.smegmatis_MC2_155 DSVGLTEDVKKFLRYNANKALMNLGYEALFPRDETDVNPAILSALAPNAD
MAB_3404c|M.abscessus_ATCC_199 DEVGLTEDVKKFLRYNANKALMNLGYEALFPREETDVNPAILSALSPNAD
Mb2003c|M.bovis_AF2122/97 DELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAG
Rv1981c|M.tuberculosis_H37Rv DELGWTDDVLPYMRYNANKALANLGYQPAFDRDTCQVNPAVRAALDPGAG
TH_0803|M.thermoresistible__bu DPLGMTEPVLPYMRFNANKALSNLGFDPLFPADDCQVAPEILAALDPGAG
* :* *: * ::*:****** ***::. * : :* * : :** *.*.
MMAR_1647|M.marinum_M ENHDFFSGSGSSYVIGKAVVTQDEDWDF
MUL_1883|M.ulcerans_Agy99 ENHDFFSGSGSSYVIGKAVATQDEDWDF
MLBr_01731|M.leprae_Br4923 ENHDFFSGSGSSYVIGKAVVTEDEDWDF
Mflv_4286|M.gilvum_PYR-GCK ENHDFFSGSGSSYVIGKAVITEDEDWDF
Mvan_2060|M.vanbaalenii_PYR-1 ENHDFFSGSGSSYVIGKAVNTEDEDWDF
MAV_3913|M.avium_104 ENHDFFSGSGSSYVIGKAVVTEDEDWDF
MSMEG_2313|M.smegmatis_MC2_155 ENHDFFSGSGSSYVIGKAVNTEDEDWDF
MAB_3404c|M.abscessus_ATCC_199 ENHDFFSGSGSSYVIGKAVNTEDEDWDF
Mb2003c|M.bovis_AF2122/97 ENHDFFSGSGSSYVMGTHQPTTDTDWDF
Rv1981c|M.tuberculosis_H37Rv ENHDFFSGSGSSYVMGTHQPTTDTDWDF
TH_0803|M.thermoresistible__bu ENHDFFSGSGAAYVIGTAESTTDEDWNW
**********::**:*. * * **::