For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0764 | aspC | - | 100% (432) | PROBABLE ASPARTATE AMINOTRANSFERASE ASPC (TRANSAMINASE A) (ASPAT) |
| M. thermoresistible (build 8) | TH_2032 | - | 2e-21 | 30.92% (262) | PLP-dependent aminotransferases |
| M. thermoresistible (build 8) | TH_2065 | aspB | 1e-19 | 26.37% (364) | POSSIBLE ASPARTATE AMINOTRANSFERASE ASPB (TRANSAMINASE A) |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0344c | aspC | 0.0 | 85.15% (431) | aminotransferase AlaT |
| M. gilvum PYR-GCK | Mflv_0279 | - | 0.0 | 88.12% (421) | aminotransferase AlaT |
| M. tuberculosis H37Rv | Rv0337c | aspC | 0.0 | 85.15% (431) | aminotransferase AlaT |
| M. leprae Br4923 | MLBr_02502 | - | 0.0 | 84.22% (431) | aminotransferase AlaT |
| M. abscessus ATCC 19977 | MAB_4294 | - | 0.0 | 87.87% (404) | aminotransferase AlaT |
| M. marinum M | MMAR_0610 | aspC | 0.0 | 85.38% (431) | aspartate aminotransferase AspC |
| M. avium 104 | MAV_4818 | - | 0.0 | 87.78% (409) | aminotransferase AlaT |
| M. smegmatis MC2 155 | MSMEG_0688 | - | 0.0 | 88.17% (431) | aminotransferase AlaT |
| M. ulcerans Agy99 | MUL_0573 | aspC | 0.0 | 85.38% (431) | aminotransferase AlaT |
| M. vanbaalenii PYR-1 | Mvan_0618 | - | 0.0 | 88.65% (414) | aminotransferase AlaT |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_0610|M.marinum_M --------MDSDETMVDVTTHQLPWHAS-SHQRQ-RSFAQSSKLQDVLYE
MUL_0573|M.ulcerans_Agy99 --------MDSDETMVDVTTHQLPWHAS-SHQRQ-RSFAQSSKLQDVLYE
Mb0344c|M.bovis_AF2122/97 --------MDNDGTIVDVTTHQLPWHTA-SHQRQ-RAFAQSAKLQDVLYE
Rv0337c|M.tuberculosis_H37Rv --------MDNDGTIVDVTTHQLPWHTA-SHQRQ-RAFAQSAKLQDVLYE
MLBr_02502|M.leprae_Br4923 MTLYQQISVDGSGTMSDVTTHQLPMHTP-GYHRQ-RAFAQSSKLQDVLYE
MAV_4818|M.avium_104 ------------------------MHSS-AHHRQQRTFAQSSKLQDVLYE
MAB_4294|M.abscessus_ATCC_1997 --------MSTDNLPIDVPP-RVPGLSP-RQHQR--VFAQSTKLQDVLYE
TH_0764|M.thermoresistible__bu --------VTSHQLPAEKTWQGYSAHGPHGHPSRPRTFAQSSKLQDVLYE
MSMEG_0688|M.smegmatis_MC2_155 -----MERVTTHQLP----WQSTGEHR------KPRTFTQSTKLQDVLYE
Mflv_0279|M.gilvum_PYR-GCK --------MSTHQAH----WQAGTGQH-----ARQREFAQSSKLQDVLYE
Mvan_0618|M.vanbaalenii_PYR-1 -----MSLVSTHQAH----WHTGSGQH-----ARQREFTQSSKLQDVLYE
: *:**:********
MMAR_0610|M.marinum_M IRGPVHQQAARLETEGHRILKLNIGNPAPFGFEAPDVIMRDMIQALPYAQ
MUL_0573|M.ulcerans_Agy99 IRGPVHQQAARLETEGHRILKLNIGNPAPFGFEAPDVIMRDMIQALPYAQ
Mb0344c|M.bovis_AF2122/97 IRGPVHQHAARLEAEGHRILKLNIGNPAPFGFEAPDVIMRDIIQALPYAQ
Rv0337c|M.tuberculosis_H37Rv IRGPVHQHAARLEAEGHRILKLNIGNPAPFGFEAPDVIMRDIIQALPYAQ
MLBr_02502|M.leprae_Br4923 IRGPVSQHATRLETEGHRILKLNIGNPALFGFDAPDVIMRDMIQALPYAQ
MAV_4818|M.avium_104 IRGPVHQHAARLEAEGHRILKLNIGNPAPFGFEAPDVIMRDMIQALPYAQ
MAB_4294|M.abscessus_ATCC_1997 IRGPVHAHAARLEAEGHRILKLNIGNPAPFGFEAPDVIMRDIIQALPYAQ
TH_0764|M.thermoresistible__bu IRGPVHDHAARLEMEGHRILKLNIGNPAPFGFEAPDVIMRDIIQALPYAQ
MSMEG_0688|M.smegmatis_MC2_155 IRGPVHEHASRLEAEGHRILKLNIGNPAPFGFEAPDVIMRDIIQALPTAQ
Mflv_0279|M.gilvum_PYR-GCK IRGPVHEHASRLEAEGHRILKLNIGNPAPFGFEAPDVIMRDIIAALPYAQ
Mvan_0618|M.vanbaalenii_PYR-1 IRGPIHEHASRLEAEGHRIFKLNIGNPAPFGFEAPDVIMRDIIAALPYAQ
****: :*:*** *****:******** ***:********:* *** **
MMAR_0610|M.marinum_M GYSDSQGILPARRAVVTRYELVDGFPRFDVDDVYLGNGVSELITMTLQAL
MUL_0573|M.ulcerans_Agy99 GYSDSQGILPARRAVVTRYELVDGFPRFDVDDVYLGNGVSELITMTLQAL
Mb0344c|M.bovis_AF2122/97 GYSDSQGILSARRAVVTRYELVPGFPRFDVDDVYLGNGVSELITMTLQAL
Rv0337c|M.tuberculosis_H37Rv GYSDSQGILSARRAVVTRYELVPGFPRFDVDDVYLGNGVSELITMTLQAL
MLBr_02502|M.leprae_Br4923 GYSDSQGILPARRAVVTRYELVDGFPRFDVDDVYLGNGVSELITMTLQAL
MAV_4818|M.avium_104 GYSDSQGILPARRAVVTRYELVDGFPRFDVDDVYLGNGVSELITMTLQAL
MAB_4294|M.abscessus_ATCC_1997 GYSDSKGILPARRAVVTRYELVDGFPYLDVDDVFLGNGVSELITMTTQAL
TH_0764|M.thermoresistible__bu GYSDSKGILPARRAVVTRYELVEGFPPFDVDDVYLGNGASELIQMTLQAL
MSMEG_0688|M.smegmatis_MC2_155 GYSDSKGILSARRAVFTRYELVEGFPKFDVDDVYLGNGVSELITMTLQAL
Mflv_0279|M.gilvum_PYR-GCK GYSDSKGIVSARRAVFTRYELVEGFPRFDIDDVFLGNGVSELIQMTLQAL
Mvan_0618|M.vanbaalenii_PYR-1 GYSDSKGIVSARRAVFTRYELVEGFPKFDIDDVFLGNGVSELITMTLQAL
*****:**:.*****.****** *** :*:***:****.**** ** ***
MMAR_0610|M.marinum_M LDNGDQVLIPAPDYPLWTASTSLAGGTPVHYLCDETQDWQPDIADLESKI
MUL_0573|M.ulcerans_Agy99 LDNGDQVLIPAPDYPLWTASTSLAGGTPVHYLCDETQDWQPDIADLESKI
Mb0344c|M.bovis_AF2122/97 LDNGDQVLIPSPDYPLWTASTSLAGGTPVHYLCDETQGWQPDIADLESKI
Rv0337c|M.tuberculosis_H37Rv LDNGDQVLIPSPDYPLWTASTSLAGGTPVHYLCDETQGWQPDIADLESKI
MLBr_02502|M.leprae_Br4923 LDNGDQVLIPSPDYPLWTASTSLAGGTPVHYLCDETQGWQPDIADVESKI
MAV_4818|M.avium_104 LDNGDEVLIPSPDYPLWTASTSLAGGTPVHYLCDETQGWQPDIADLESKI
MAB_4294|M.abscessus_ATCC_1997 LDNGDQVLIPAPDYPLWTAATSLAGGTAVHYLCDETNGWMPDIEDLESKI
TH_0764|M.thermoresistible__bu LDNGDQVLIPAPDYPLWTACTSLAGGTPVHYLCDETQGWNPDIEDLESKI
MSMEG_0688|M.smegmatis_MC2_155 LDNGDQVLIPAPDYPLWTASTSLAGGTPVHYLCDETQGWNPDVADIESKI
Mflv_0279|M.gilvum_PYR-GCK LDNGDQVLIPAPDYPLWTACTSLAGGTPVHYLCDETQGWNPDVADIESKI
Mvan_0618|M.vanbaalenii_PYR-1 LDNGDQVLIPAPDYPLWTASTALAGGTPVHYLCDETQGWNPDIADLESKI
*****:****:********.*:*****.********:.* **: *:****
MMAR_0610|M.marinum_M TERTKALVIINPNNPTGAVYSHEILTQMVELARKHELLLLADEIYDKILY
MUL_0573|M.ulcerans_Agy99 TERTKALVIINPNNPTGAVYSHEILTQMVELARKHELLLLADEIYDKILY
Mb0344c|M.bovis_AF2122/97 TERTKALVVINPNNPTGAVYSCEILTQMVDLARKHQLLLLADEIYDKILY
Rv0337c|M.tuberculosis_H37Rv TERTKALVVINPNNPTGAVYSCEILTQMVDLARKHQLLLLADEIYDKILY
MLBr_02502|M.leprae_Br4923 TERTKALVVINPNNPTGAVYSNEILNQIVDLARKHQLLLLADEIYDKILY
MAV_4818|M.avium_104 TERTKALVVINPNNPTGAVYSGEILSQMVDLARKHELLLLADEIYDKILY
MAB_4294|M.abscessus_ATCC_1997 TERTKALVIINPNNPTGAVYSREILTKMVELARKHQLLLLADEIYDKILY
TH_0764|M.thermoresistible__bu TERTKAIVVINPNNPTGAVYTRETLEQIAELARRHQLLLLADEIYDKILY
MSMEG_0688|M.smegmatis_MC2_155 TERTKAIVVINPNNPTGAVYSRETLEQIVDLARKHQLLLLADEIYDKILY
Mflv_0279|M.gilvum_PYR-GCK TDRTKAIVVINPNNPTGAVYSREVLTQIADLARKHQLLLLADEIYDKILY
Mvan_0618|M.vanbaalenii_PYR-1 TERTKALVVINPNNPTGAVYSRETLEQMVELARKHQLLLLADEIYDKILY
*:****:*:***********: * * ::.:***:*:**************
MMAR_0610|M.marinum_M DDAKHISVATLAPDMLCLTFNGLSKAYRVAGYRAGWLAITGPKEHASSFI
MUL_0573|M.ulcerans_Agy99 DDAKHISVATLAPDMLCLTFNGLSKAYRVAGYRAGWLAITGPKEHASSFI
Mb0344c|M.bovis_AF2122/97 DDAKHISLASIAPDMLCLTFNGLSKAYRVAGYRAGWLAITGPKEHASSFI
Rv0337c|M.tuberculosis_H37Rv DDAKHISLASIAPDMLCLTFNGLSKAYRVAGYRAGWLAITGPKEHASSFI
MLBr_02502|M.leprae_Br4923 DDTKHISVASIAPDLLCLTFNGLSKAYRVAGYRSGWLAITGPKDHASSFI
MAV_4818|M.avium_104 DAAKHINVASLAPDMLCLTFNGLSKAYRVAGYRAGWLAITGPKDHAGSFI
MAB_4294|M.abscessus_ATCC_1997 DDAEHISVASLAPDLLCFTFNGLSKAYRVAGYRSAWLAITGPKDHAASLL
TH_0764|M.thermoresistible__bu DDAKHISMAAVAPDVLTLTFNGLSKAYRVAGYRSGWLCITGPKEHAASFI
MSMEG_0688|M.smegmatis_MC2_155 DDAKHISLATLAPDLLCLTFNGLSKAYRVAGYRSGWLVITGPKEHATSFI
Mflv_0279|M.gilvum_PYR-GCK DDAEHISLASVAPDLLTLTFNGLSKAYRVAGYRSGWLVITGPKEHAASFI
Mvan_0618|M.vanbaalenii_PYR-1 DDAKHISLATLAPDLLTLTFNGLSKAYRVAGYRSGWLVITGPKEHAASFI
* ::**.:*::***:* :***************:.** *****:** *::
MMAR_0610|M.marinum_M EGISLLANMRLCPNVPAQHAIQVALGGHQSIDDLVLPGGRLLEQRDVAWS
MUL_0573|M.ulcerans_Agy99 EGISLLANMRLCPNVPAQHAIQVALGGHQSIDDLVLPGGRLLEQRDVAWS
Mb0344c|M.bovis_AF2122/97 EGIGLLANMRLCPNVPAQHAIQVALGGHQSIEDLVLPGGRLLEQRDIAWT
Rv0337c|M.tuberculosis_H37Rv EGIGLLANMRLCPNVPAQHAIQVALGGHQSIEDLVLPGGRLLEQRDIAWT
MLBr_02502|M.leprae_Br4923 GGINLLANMRLCPNVPAQHAIQVALGGHQSIEDLVLPGGRLLEQRDVAWT
MAV_4818|M.avium_104 EGINLLANMRLCPNVPAQHAIQVALGGHQSIEDLVLPGGRLLEQRDVAWS
MAB_4294|M.abscessus_ATCC_1997 EGVNLLANMRLCPNVPAQHAIQVALGGHQSIEDLVLPGGRLLEQRDVAWT
TH_0764|M.thermoresistible__bu EGISLLANMRLCPNVPAQHAIQVALGGHQSIEELVLPGGRLREQRDVAWE
MSMEG_0688|M.smegmatis_MC2_155 EGISLLANMRLCPNVPAQHAIQVALGGHQSIDALVLPGGRLLEQRDVAWE
Mflv_0279|M.gilvum_PYR-GCK EGISLLANMRLCPNVPAQHAIQVALGGHQSIDDLVLPGGRLLEQRDIAWE
Mvan_0618|M.vanbaalenii_PYR-1 EGINLLANMRLCPNVPAQHAIQVALGGHQSIDDLVLPGGRLLEQRDVAWE
*:.***************************: ******** ****:**
MMAR_0610|M.marinum_M KLNEIPGVSCVKPKGALYAFPRLDPEVYDIADDEQLVLDLLLSEKILVTQ
MUL_0573|M.ulcerans_Agy99 KLNEIPGVSCVKPKGALYAFPRLDPEVYDIADDEQLVLDLLLSEKILVTQ
Mb0344c|M.bovis_AF2122/97 KLNEIPGVSCVKPAGALYAFPRLDPEVYDIDDDEQLVLDLLLSEKILVTQ
Rv0337c|M.tuberculosis_H37Rv KLNEIPGVSCVKPAGALYAFPRLDPEVYDIDDDEQLVLDLLLSEKILVTQ
MLBr_02502|M.leprae_Br4923 KLNEIPGVSCVKPTGALYAFPRLDPEVYGIVDDEQLVLDLLLQEKILVTQ
MAV_4818|M.avium_104 KLNEIPGVSCVKPAGALYAFPRLDPEVYDITDDEQLVLDLLLQEKILVTQ
MAB_4294|M.abscessus_ATCC_1997 KLNEIPGVSCVKPQGALYAFPRLDPEVHHIHDDDQLVLDLLLNEKILLTQ
TH_0764|M.thermoresistible__bu KLNEIPGVSCVKPQGALYVFPRLDPEVYEIHDDEQLVLDLLLQEKILLTQ
MSMEG_0688|M.smegmatis_MC2_155 KLNEIPGVSCVKPRGALYAFPRLDPEVYDIHDDEQLVLDLLLQEKILLTQ
Mflv_0279|M.gilvum_PYR-GCK TLNEIPGVSCVKPQGALYAFPRLDPEVYDIADDEQLVLDLLLQEKILVVQ
Mvan_0618|M.vanbaalenii_PYR-1 KLNEIPGVSCVKPKGALYAFPRLDPEVYDVEDDEQLVLDLLLQEKILLTQ
.************ ****.********: : **:********.****:.*
MMAR_0610|M.marinum_M GTGFNWPEPDHLRLVTLPWSRDLAAAIERLGNFLVSYRQ-
MUL_0573|M.ulcerans_Agy99 GTGFNWPEPDHLRLVTLPWSRDLAAAIERLGNFLVSYRQ-
Mb0344c|M.bovis_AF2122/97 GTGFNWPAPDHLRLVTLPWSRDLAAAIERLGNFLVSYRQ-
Rv0337c|M.tuberculosis_H37Rv GTGFNWPAPDHLRLVTLPWSRDLAAAIERLGNFLVSYRQ-
MLBr_02502|M.leprae_Br4923 GSGFNWPAPDHLRLVTLPWSRDLAAAIDRLGNFLVSYRQ-
MAV_4818|M.avium_104 GTGFNWPAPDHLRIVTLPWARDLAAAIERLGNFLVGYRQ-
MAB_4294|M.abscessus_ATCC_1997 GTGFNWPEPDHLRIVTLPWARDLAVAIERLGNFLASYRQ-
TH_0764|M.thermoresistible__bu GTGFNWPTPDHLRIVTLPWARDLANAIERLGNFLVSYRQ-
MSMEG_0688|M.smegmatis_MC2_155 GTGFNWPTPDHLRIVTLPWARDLASAIERLGNFLASYRQ-
Mflv_0279|M.gilvum_PYR-GCK GTGFNWPTPDHLRIVTLPWARDLSAAIERLGNFLVSYRQ-
Mvan_0618|M.vanbaalenii_PYR-1 GTGFNWPTPDHLRIVTLPWSRDLAAAIERLGNFLVSYRQQ
*:***** *****:*****:***: **:******..***