For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0692 | thyA | - | 100% (271) | PROBABLE THYMIDYLATE SYNTHASE THYA (TS) (TSASE) |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2786c | thyA | 1e-139 | 86.26% (262) | thymidylate synthase |
M. gilvum PYR-GCK | Mflv_4007 | thyA | 1e-141 | 87.79% (262) | thymidylate synthase |
M. tuberculosis H37Rv | Rv2764c | thyA | 1e-139 | 86.26% (262) | thymidylate synthase |
M. leprae Br4923 | MLBr_01519 | thyA | 1e-132 | 80.68% (264) | thymidylate synthase |
M. abscessus ATCC 19977 | MAB_3091c | - | 1e-134 | 83.02% (265) | thymidylate synthase (ThyA) |
M. marinum M | MMAR_1956 | thyA | 1e-135 | 83.71% (264) | thymidylate synthase ThyA |
M. avium 104 | MAV_3652 | thyA | 1e-141 | 87.12% (264) | thymidylate synthase |
M. smegmatis MC2 155 | MSMEG_2670 | thyA | 1e-142 | 87.50% (264) | thymidylate synthase |
M. ulcerans Agy99 | MUL_2178 | thyA | 1e-136 | 84.09% (264) | thymidylate synthase |
M. vanbaalenii PYR-1 | Mvan_2380 | thyA | 1e-138 | 85.98% (264) | thymidylate synthase |
CLUSTAL 2.0.9 multiple sequence alignment TH_0692|M.thermoresistible__bu VPINGSIPTPYEDLLRLVLERGTPKADRTGTGTRSLFGHQMRYDLSAGFP MAB_3091c|M.abscessus_ATCC_199 ----MSLPTPYEDLLRLVLEEGTPKADRTGTGTRSVFGHQLRYRLEDGFP Mflv_4007|M.gilvum_PYR-GCK ----MPTATPYEDLLRLVLDTGTPKSDRTGTGTRSLFGHQMRYDLNAGFP Mvan_2380|M.vanbaalenii_PYR-1 ----MPIATPYEDLLRLVLDTGTTKSDRTGTGTRSLFGHQMRYDLNAGFP MSMEG_2670|M.smegmatis_MC2_155 ----MPIDTPYEDLLRLVTERGTPKSDRTGTGTRSLFGHQMRYDLSAGFP Mb2786c|M.bovis_AF2122/97 -------MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFP Rv2764c|M.tuberculosis_H37Rv -------MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFP MMAR_1956|M.marinum_M ----MPIATPYEDLLRRVLETGTAKSDRTGTGTRSLFGQQIRYDLGCGFP MUL_2178|M.ulcerans_Agy99 ----MPIATPYEDLLRRVLETGTAKSDRTGTGTRSLFGQQIRYDLGCGFP MLBr_01519|M.leprae_Br4923 ----MLIATPYEDLLRLVLDCGVAKMDRTGTGTRSLFGQQLRYDLSVGFP MAV_3652|M.avium_104 ----MPIPTPYEDLLRLVLDRGTAKSDRTGTGTRSLFGQQLRYDLSAGFP ******** * : *..* *********:**:*:** * *** TH_0692|M.thermoresistible__bu LITTKKVHTKSVIYELLWFLRGDSNVRWLQDRGVTIWDEWADDDGELGPV MAB_3091c|M.abscessus_ATCC_199 LITTKKVHLKSVIYELLWFLRGESNVRWLQERGVTIWDEWASEAGELGPV Mflv_4007|M.gilvum_PYR-GCK LITTKKVHTKSIVYELLWFLRGDSNVRWLQERGVTIWDEWASPTGDLGPV Mvan_2380|M.vanbaalenii_PYR-1 LITTKKVHTKSIVYELLWFLRGDSNVRWLQEHGVTIWDEWASPTGDLGPV MSMEG_2670|M.smegmatis_MC2_155 LITTKKVHTKSVIYELLWFLRGDSNVRWLQEHGVTIWDEWASETGDLGPI Mb2786c|M.bovis_AF2122/97 LLTTKKVHFKSVAYELLWFLRGDSNIGWLHEHGVTIWDEWASDTGELGPI Rv2764c|M.tuberculosis_H37Rv LLTTKKVHFKSVAYELLWFLRGDSNIGWLHEHGVTIWDEWASDTGELGPI MMAR_1956|M.marinum_M LLTTKKVHFKSVVYELLWFLRGDSNVGWLQQHGVTIWDEWASETGDLGPI MUL_2178|M.ulcerans_Agy99 LLTTKKVHFKSVVYELLWFLRGDSNVGWLQQHGVTIWDEWASETGDLGPI MLBr_01519|M.leprae_Br4923 LVTTKKVHFKSVVYELLWFLRGDSNVAWLHEHGVNIWDEWASSTGDLGPI MAV_3652|M.avium_104 LITTKKVHLKSVVYELLWFLRGDSNVDWLHRHGVTIWDEWASDTGDLGPI *:****** **: *********:**: **: :**.******. *:***: TH_0692|M.thermoresistible__bu YGVQWRSWPTPSGEHVDQISAALELLRTDPDSRRIIVSAWNVADLDEMAL MAB_3091c|M.abscessus_ATCC_199 YGVQWRAWPTPSGEHIDQISAALDLLRTNPDSRRNIVSAWNVGEIPQMAL Mflv_4007|M.gilvum_PYR-GCK YGVQWRSWPTPSGEHIDQISAALDLLKRDPDSRRNIVSAWNVGEIPQMAL Mvan_2380|M.vanbaalenii_PYR-1 YGVQWRSWPTPSGAHIDQISAALDLLRRDPDSRRNIVSAWNVGEIPQMAL MSMEG_2670|M.smegmatis_MC2_155 YGVQWRSWPTPSGEHIDQISSALELLKSDPDSRRNIVSAWNVGEIPQMAL Mb2786c|M.bovis_AF2122/97 YGVQWRSWPAPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIERMAL Rv2764c|M.tuberculosis_H37Rv YGVQWRSWPAPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIERMAL MMAR_1956|M.marinum_M YGVQWRSWPTPSGEHIDQISAALELLRTDPDSRRIIVSAWNVGQIPQMAL MUL_2178|M.ulcerans_Agy99 YGVQWRSWPTPSGEHIDQISAALELLRTDPDSRRIIVSAWNVGQIPQMAL MLBr_01519|M.leprae_Br4923 YGVQWRSWPTSSGDYIDQISTALDLLRTEPDSRRIIVSAWNVGEIPQMAL MAV_3652|M.avium_104 YGVQWRSWPTPSGEHIDQISAALDLLRTDPDSRRIIVSAWNVGEIPRMAL ******:**:.** ::****:**:**: :***** *******.:: .*** TH_0692|M.thermoresistible__bu PPCHTLFQFYVAGGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAG MAB_3091c|M.abscessus_ATCC_199 PPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAG Mflv_4007|M.gilvum_PYR-GCK PPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAG Mvan_2380|M.vanbaalenii_PYR-1 PPCHAFFQFYVSGGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAG MSMEG_2670|M.smegmatis_MC2_155 PPCHAFFQFYVADGKLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAG Mb2786c|M.bovis_AF2122/97 PPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAG Rv2764c|M.tuberculosis_H37Rv PPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAG MMAR_1956|M.marinum_M PPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAG MUL_2178|M.ulcerans_Agy99 PPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAG MLBr_01519|M.leprae_Br4923 PPCHAFFQFYVAQGRLSCQLYQRSADMFLGVPFNIASYALLTHMMAAQSG MAV_3652|M.avium_104 PPCHAFFQFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAG ****::*****: *:***********:*********************:* TH_0692|M.thermoresistible__bu LQVGEFIWTGGDCHIYDNHVEQVRLQLSRDPRPYPELELAPRDSIFDYTF MAB_3091c|M.abscessus_ATCC_199 LGVGDFVWTGGDCHIYDNHVEQVTEQLSRDPYPYPTLVLAQRDSIFDYRY Mflv_4007|M.gilvum_PYR-GCK LGVGEFIWTGGDCHIYDNHVEQVTEQLSRDPRPYPELVLAPRDSIFDYTY Mvan_2380|M.vanbaalenii_PYR-1 LGVGEFIWTGGDCHIYDNHVEQVTEQLSREPRPYPELVLAQRDSLFDYIY MSMEG_2670|M.smegmatis_MC2_155 LDVGEFIWTGGDCHIYDNHTEQVALQLSREPRPYPELVLAPRDSIFDYTY Mb2786c|M.bovis_AF2122/97 LSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLADRDSIFEYTY Rv2764c|M.tuberculosis_H37Rv LSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLADRDSIFEYTY MMAR_1956|M.marinum_M LSVGEFIWTGGDCHIYGNHVEQVTEQLRREPRPYPKLSLSQRDSIFDYTY MUL_2178|M.ulcerans_Agy99 LSVGEFIWTGGDCHIYDNHVEQVTEQLRREPRPYPKLSLSQRDSIFDYTY MLBr_01519|M.leprae_Br4923 LLVGEFVWTGGDCHIYDNHVEQVQLQLSREPRAYPELFLAQRDSIFDYVY MAV_3652|M.avium_104 LSVGEFVWTGGDCHIYDNHVEQVRLQLSREPRPYPELVLAHRDSIFDYTY * **:*:*********.**.*** ** *:* .** * *: ***:*:* : TH_0692|M.thermoresistible__bu EDVVIRNYDPHPAIKAPVAV MAB_3091c|M.abscessus_ATCC_199 EDITVENYQHHAAIKAPVAV Mflv_4007|M.gilvum_PYR-GCK EDVVIKNYEPHPAIKAPVAI Mvan_2380|M.vanbaalenii_PYR-1 EDVVIKNYDPHPAIKAPVAV MSMEG_2670|M.smegmatis_MC2_155 EDIAIVNYDPHPAIKAPVAV Mb2786c|M.bovis_AF2122/97 EDIVVKNYDPHPAIKAPVAV Rv2764c|M.tuberculosis_H37Rv EDIVVKNYDPHPAIKAPVAV MMAR_1956|M.marinum_M EDVVVQDYDPHPAIKAPVAV MUL_2178|M.ulcerans_Agy99 EDVVVQDYDPHPAIKAPVAV MLBr_01519|M.leprae_Br4923 EDVVVTNYDPHPAIKAPVAI MAV_3652|M.avium_104 DDVVVHNYDPHPAIKAPVAV :*:.: :*: *.*******: