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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0602 | rnhA | - | 100% (158) | RNase H |
| M. thermoresistible (build 8) | TH_1467 | - | 5e-06 | 32.47% (154) | CONSERVED HYPOTHETICAL PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1836 | rnhA | 7e-72 | 82.31% (147) | ribonuclease H |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_5562 | rnhA | 6e-75 | 86.71% (143) | RNase H |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_4905 | rnhA | 2e-76 | 86.00% (150) | ribonuclease H |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1836|M.gilvum_PYR-GCK ---MS-DVVVIHTDGGCRPNPGPGGWGAVLRQRHHVREMCGGEPAQTSNN
MSMEG_5562|M.smegmatis_MC2_155 ---MSQDPVIIHTDGGCRPNPGPGGWGAVLRHREHVREMFGGEAAVTSNN
Mvan_4905|M.vanbaalenii_PYR-1 ---MTDDPVIIHTDGGCRPNPGPGGWGAVLRQRDHVREMFGGEAGATSNN
TH_0602|M.thermoresistible__bu MSAFDEAPVIIHTDGGCRPNPGPGGWGAVLRQGRHVREIFGGDAGVTSNN
: *:*********************: ****: **:.. ****
Mflv_1836|M.gilvum_PYR-GCK RMELTAPIMALEALTRPVSVHLYTDSTYVRNGITKWVLGWERNGWMTAAK
MSMEG_5562|M.smegmatis_MC2_155 RMELTAPIMALEALTRPVTVHLYTDSTYVRNGITKWVLGWERNGWMTAAK
Mvan_4905|M.vanbaalenii_PYR-1 RMELMAPIMALEALTRPVVVHLHTDSTYVRNGITKWVFGWERNGWMTAAK
TH_0602|M.thermoresistible__bu RMELTAPIMALEALTRPVVVHLHTDSTYVRNGITTWVHGWERNGWMTAAR
**** ************* ***:***********.** ***********:
Mflv_1836|M.gilvum_PYR-GCK QPVKNADLWRRLQSACARHEVEWFWVKGHSGVADNELADVLATRGLQEAL
MSMEG_5562|M.smegmatis_MC2_155 QPVKNVDLWQRLQAACARHQVEWFWVKGHSGIGDNELADELATRGLQEAV
Mvan_4905|M.vanbaalenii_PYR-1 QPVKNVDLWQRLQIASAQHRVEWFWVKGHSGIADNELADALATRGLQEAI
TH_0602|M.thermoresistible__bu QPVKNVDLWQRLQAACARHRVEWFWVKGHSGVADNELADQLAARGLRQAL
*****.***:*** *.*:*.***********:.****** **:***::*:
Mflv_1836|M.gilvum_PYR-GCK AASVV-------
MSMEG_5562|M.smegmatis_MC2_155 GLTTSSAGTSLR
Mvan_4905|M.vanbaalenii_PYR-1 AAAAIPT-----
TH_0602|M.thermoresistible__bu EAAALLT-----
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