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VSQDPVIIHTDGGCRPNPGPGGWGAVLRHREHVREMFGGEAAVTSNNRMELTAPIMALEALTRPVTVHLY TDSTYVRNGITKWVLGWERNGWMTAAKQPVKNVDLWQRLQAACARHQVEWFWVKGHSGIGDNELADELAT RGLQEAVGLTTSSAGTSLR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_5562 | rnhA | - | 100% (159) | RNase H |
| M. smegmatis MC2 155 | MSMEG_4305 | - | 2e-06 | 30.92% (152) | bifunctional RNase H/acid phosphatase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1836 | rnhA | 9e-77 | 88.89% (144) | ribonuclease H |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_0602 | rnhA | 4e-75 | 86.71% (143) | RNase H |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_4905 | rnhA | 4e-77 | 87.76% (147) | ribonuclease H |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_5562|M.smegmatis_MC2_155 ---MSQDPVIIHTDGGCRPNPGPGGWGAVLRHREHVREMFGGEAAVTSNN
Mflv_1836|M.gilvum_PYR-GCK ---MS-DVVVIHTDGGCRPNPGPGGWGAVLRQRHHVREMCGGEPAQTSNN
Mvan_4905|M.vanbaalenii_PYR-1 ---MTDDPVIIHTDGGCRPNPGPGGWGAVLRQRDHVREMFGGEAGATSNN
TH_0602|M.thermoresistible__bu MSAFDEAPVIIHTDGGCRPNPGPGGWGAVLRQGRHVREIFGGDAGVTSNN
: *:*********************: ****: **:.. ****
MSMEG_5562|M.smegmatis_MC2_155 RMELTAPIMALEALTRPVTVHLYTDSTYVRNGITKWVLGWERNGWMTAAK
Mflv_1836|M.gilvum_PYR-GCK RMELTAPIMALEALTRPVSVHLYTDSTYVRNGITKWVLGWERNGWMTAAK
Mvan_4905|M.vanbaalenii_PYR-1 RMELMAPIMALEALTRPVVVHLHTDSTYVRNGITKWVFGWERNGWMTAAK
TH_0602|M.thermoresistible__bu RMELTAPIMALEALTRPVVVHLHTDSTYVRNGITTWVHGWERNGWMTAAR
**** ************* ***:***********.** ***********:
MSMEG_5562|M.smegmatis_MC2_155 QPVKNVDLWQRLQAACARHQVEWFWVKGHSGIGDNELADELATRGLQEAV
Mflv_1836|M.gilvum_PYR-GCK QPVKNADLWRRLQSACARHEVEWFWVKGHSGVADNELADVLATRGLQEAL
Mvan_4905|M.vanbaalenii_PYR-1 QPVKNVDLWQRLQIASAQHRVEWFWVKGHSGIADNELADALATRGLQEAI
TH_0602|M.thermoresistible__bu QPVKNVDLWQRLQAACARHRVEWFWVKGHSGVADNELADQLAARGLRQAL
*****.***:*** *.*:*.***********:.****** **:***::*:
MSMEG_5562|M.smegmatis_MC2_155 GLTTSSAGTSLR
Mflv_1836|M.gilvum_PYR-GCK AASVV-------
Mvan_4905|M.vanbaalenii_PYR-1 AAAAIPT-----
TH_0602|M.thermoresistible__bu EAAALLT-----
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