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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0480 | choD | - | 100% (579) | PROBABLE CHOLESTEROL OXIDASE PRECURSOR CHOD (CHOLESTEROL-O2 OXIDOREDUCTASE) |
| M. thermoresistible (build 8) | TH_2629 | - | 3e-32 | 27.21% (555) | PUTATIVE putative GMC oxidoreductase |
| M. thermoresistible (build 8) | TH_4673 | - | 9e-09 | 25.61% (328) | PUTATIVE - |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3443c | choD | 0.0 | 83.04% (578) | cholesterol oxidase precursor |
| M. gilvum PYR-GCK | Mflv_4906 | - | 0.0 | 82.70% (578) | FAD dependent oxidoreductase |
| M. tuberculosis H37Rv | Rv3409c | choD | 0.0 | 83.04% (578) | cholesterol oxidase precursor |
| M. leprae Br4923 | MLBr_00389 | choD | 0.0 | 83.95% (567) | putative cholesterol oxidase |
| M. abscessus ATCC 19977 | MAB_3719c | - | 0.0 | 77.66% (573) | putative cholesterol oxidase ChoD |
| M. marinum M | MMAR_1140 | choD | 0.0 | 82.40% (574) | cholesterol oxidase precursor ChoD |
| M. avium 104 | MAV_4354 | - | 0.0 | 84.38% (576) | FAD dependent oxidoreductase |
| M. smegmatis MC2 155 | MSMEG_1604 | - | 0.0 | 88.06% (578) | FAD dependent oxidoreductase |
| M. ulcerans Agy99 | MUL_0903 | choD | 0.0 | 82.40% (574) | cholesterol oxidase precursor ChoD |
| M. vanbaalenii PYR-1 | Mvan_1514 | - | 0.0 | 84.08% (578) | FAD dependent oxidoreductase |
CLUSTAL 2.0.9 multiple sequence alignment
TH_0480|M.thermoresistible__bu ------------MQPDYDVLVIGSGFGGSVSALRLTEKGYRVGVLEAGRR
MSMEG_1604|M.smegmatis_MC2_155 ------------MKPDYDVLVIGSGFGGSVSALRLTEKGYRVGVLEAGRR
Mflv_4906|M.gilvum_PYR-GCK ------------MRPDYDVLIIGSGFGGSVSALRLTEKGYRVGVLEAGRR
Mvan_1514|M.vanbaalenii_PYR-1 ------------MKPDYDVLIIGSGFGGSVSALRLTEKGYRVGVLEAGRR
Mb3443c|M.bovis_AF2122/97 ------------MKPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRR
Rv3409c|M.tuberculosis_H37Rv ------------MKPDYDVLIIGSGFGGSVTALRLTEKGYRVGVLEAGRR
MMAR_1140|M.marinum_M ------------MKPDYDVLIIGSGFGGSVSALRLTEKGYRVGVLEAGRR
MUL_0903|M.ulcerans_Agy99 ------------MKPDYDVLIIGSGFGGSVSALRLTEKGYRVGVLEAGRR
MLBr_00389|M.leprae_Br4923 ------------MKPDYDVLIIGSGFGGSVSALRLTEKGYRVGVLEAGRR
MAV_4354|M.avium_104 ------------MKPDYDVLIIGSGFGGSVSALRLTEKGYRVGVLEAGRR
MAB_3719c|M.abscessus_ATCC_199 MSSPAAVPVKPEADTDFDVLIVGSGFGGSVTAMRLTEKGYRVGVLEAGRR
.*:***::********:*:*****************
TH_0480|M.thermoresistible__bu FADEDFAKTSWNLRKFLWAPKLGCYGIQRIHLLRNVMILAGAGVGGGSLN
MSMEG_1604|M.smegmatis_MC2_155 FSDEEFAKTSWQLRKFLWAPKLGCYGIQRIHLLRNVMILAGAGVGGGSLN
Mflv_4906|M.gilvum_PYR-GCK YADDEFAKTSWNLRKFLWAPQFGMYGIQRIHLLRNVMILAGAGVGGGSLN
Mvan_1514|M.vanbaalenii_PYR-1 YADDEFAKTSWNLRKFLWAPQFGMYGIQRIHLLRNVMILAGAGVGGGSLN
Mb3443c|M.bovis_AF2122/97 FSDEEFAKTSWDLRKFLWAPRLGCYGIQRIHPLRNVMILAGAGVGGGSLN
Rv3409c|M.tuberculosis_H37Rv FSDEEFAKTSWDLRKFLWAPRLGCYGIQRIHPLRNVMILAGAGVGGGSLN
MMAR_1140|M.marinum_M FSDAEFAKTSWDLRKFLWAPKLGCYGIQRIHPLKNVMILAGAGVGGGSLN
MUL_0903|M.ulcerans_Agy99 FSDAEFAKTSWDLRKFLWAPKLGCYGIQRIHPLKNVMILAGAGVGGGSLN
MLBr_00389|M.leprae_Br4923 FADEDFAKTSWDLRKFLWAPKLGCYGIQRIHLLRNVMILAGAGVGGGSLN
MAV_4354|M.avium_104 FADEDFAETSWDLRKFLWAPKLGCYGIQRIHPLKNVLILAGAGVGGGSLN
MAB_3719c|M.abscessus_ATCC_199 FADEEFAETSWDLRKFLWAPMFKCFGIQRIHLLSNCMILAGAGVGGGSLN
::* :**:***:******** : :****** * * :*************
TH_0480|M.thermoresistible__bu YANTLYVPPEPFFKDRQWAHITDWRDELMPHYDQAQRMLGVVTNPTFTDA
MSMEG_1604|M.smegmatis_MC2_155 YANTLYVPPEPFFADRQWAGITDWRAELTPHYDQAQRMLGVVTNPTFTDA
Mflv_4906|M.gilvum_PYR-GCK YANTLYVPPEPFFNDPQWRDITDWRAELMSHYDQAQRMLGVVTNPTFTDA
Mvan_1514|M.vanbaalenii_PYR-1 YANTLYVPPEPFFNDPQWKDITDWRAELMSHYDQAQRMLGVVTNPTFTDA
Mb3443c|M.bovis_AF2122/97 YANTLYVPPEPFFADQQWSHITDWRGELMPHYQQAQRMLGVVQNPTFTDA
Rv3409c|M.tuberculosis_H37Rv YANTLYVPPEPFFADQQWSHITDWRGELMPHYQQAQRMLGVVQNPTFTDA
MMAR_1140|M.marinum_M YANTLYVPPDPFFNDQQWKHITDWRDELMPHYQQAQRMLGVVKNPTFTDA
MUL_0903|M.ulcerans_Agy99 YANTLYVPPDPFFNDQQWKHITDWRDELMPHYQQAQRMLGVVKNPTFTDA
MLBr_00389|M.leprae_Br4923 YANTLYVPPEPFFANQQWAHITDWHSELAPHYDQAQRMLGVVCNPTFTDA
MAV_4354|M.avium_104 YANTLYVPPEPFFKDQQWAHITDWRDELMPHYDQAQRMLGVVTNPTFTDA
MAB_3719c|M.abscessus_ATCC_199 YANTLYVPPDPFFNDPQWKGITDWRAELSPHYEQAQRMLGVVKNPTFTDA
*********:*** : ** ****: ** .**:********* *******
TH_0480|M.thermoresistible__bu DRVVKEVAEEMGVGHTFVPTPVGVFFGPDGQKTPGETVPDPYFGGVGPDR
MSMEG_1604|M.smegmatis_MC2_155 DRVVKEVADDMGVGDTFVQTPVGVFFGPDGEKTPGKTVPDPYFGGVGPDR
Mflv_4906|M.gilvum_PYR-GCK DRIMKEVADDMGVGDTFVPTPVGVFFGPDGEKTPGKTVADPYFGGAGPAR
Mvan_1514|M.vanbaalenii_PYR-1 DRIMKEVADDMGVGDTFVPTPVGVFFGPDGEKTPGKTVPDPYFGGAGPAR
Mb3443c|M.bovis_AF2122/97 DRIVKEVADEMGFGDTWVPTPVGVFFGPDGTKTPGKTVPDPYFGGAGPAR
Rv3409c|M.tuberculosis_H37Rv DRIVKEVADEMGFGDTWVPTPVGVFFGPDGTKTPGKTVPDPYFGGAGPAR
MMAR_1140|M.marinum_M DRIVKEVADEMGFGDTWVPTPVGVFFGPDGTKTPGKTVPDPYFGGAGPAR
MUL_0903|M.ulcerans_Agy99 DRIVKEVADEMGFGDTWVPTPVGVFFGPDGTKTPGKTVPDPYFGGAGPAR
MLBr_00389|M.leprae_Br4923 DRILKEVVDEMGFGDTFVPTPVGVFFGPDGTQTPGRTVADPYFGGVGPVR
MAV_4354|M.avium_104 DRIVKEVADEMGCGDTFVPTPVGVFFGPDGTKAPGKTVPDPYFGGAGPER
MAB_3719c|M.abscessus_ATCC_199 DRLIKEVADDMGAGDTFVATPVGVYFGPDGTKTPGVKVPDPYFGGAGPDR
**::***.::** *.*:* *****:***** ::** .*.******.** *
TH_0480|M.thermoresistible__bu TGCIECGSCMTGCRHNAKNTLVKNYLGLAEQAGTEVHAMTTVTGFEQLPD
MSMEG_1604|M.smegmatis_MC2_155 TGCIECGSCMTGCRYGAKNTLLKNYLGLAERGGAEVHPLRTVAGFEQLPD
Mflv_4906|M.gilvum_PYR-GCK TGCIECGSCMTGCRYGAKNTLVKNYLGLAEKAGAQVHPLTMVTGFEQRPD
Mvan_1514|M.vanbaalenii_PYR-1 TGCIECGSCMTGCRYGAKNTLLKNYLGLAEKAGAHVHPLTMVTGFEQRPD
Mb3443c|M.bovis_AF2122/97 TGCLECGCCMTGCRHGAKNTLVKNYLGLAESAGAQVIPMTTVKGFERRSD
Rv3409c|M.tuberculosis_H37Rv TGCLECGCCMTGCRHGAKNTLVKNYLGLAESAGAQVIPMTTVKGFERRSD
MMAR_1140|M.marinum_M TGCTECGECMTGCRHGAKNTLVKNYLGLAESAGAEVIPMTTVKGFEQRPD
MUL_0903|M.ulcerans_Agy99 TGCTECGECMTGCRHGAKNTLVKNYLGLAESAGAEVIPMTTVKGFEQRPD
MLBr_00389|M.leprae_Br4923 TGCLECGCCMTGCRHGAKNTLVKNYLGLAESAGAQVIPMTTVKGFELRSE
MAV_4354|M.avium_104 TGCLECGCCMTGCRYGAKNTLLKNYLGLAESAGAQVLPMTTVKAFEQRPD
MAB_3719c|M.abscessus_ATCC_199 VGCTECGSCMTGCRVGAKNTLVKNYLGLAESNGAQVIPLTTVTAVQQGAD
.** *** ****** .*****:******** *:.* .: * ..: .:
TH_0480|M.thermoresistible__bu GTWRVDTVRTGRWLRKRRKSFTATHLILAAGTWGTQRLLFKMRDAGKLPN
MSMEG_1604|M.smegmatis_MC2_155 GTWRVDTVRTGRWARKDKRSFTATHVVLAAGTWGTQRLLFKMRDTGKLPK
Mflv_4906|M.gilvum_PYR-GCK GLWEVHTARTGSKVRRRRKTFTAEHVILAAGTYGTQKLLFKMRDRGKLPK
Mvan_1514|M.vanbaalenii_PYR-1 GLWEVRTARTGSKLRRRRRTFTAQHLILAAGTYGTQKLLFKMRDQGKLPE
Mb3443c|M.bovis_AF2122/97 GLWEVRTVRTGSWLRRDRRTFTATQLVLAAGTWGTQHLLFKMRDRGRLPG
Rv3409c|M.tuberculosis_H37Rv GLWEVRTVRTGSWLRRDRRTFTATQLVLAAGTWGTQHLLFKMRDRGRLPG
MMAR_1140|M.marinum_M GLWEVRTVRTGSWARRDRRTFTASYLILAAGTWGTQHLLFKMRDKGKLPR
MUL_0903|M.ulcerans_Agy99 GLWEVRTVRTGSWARRDRRTFTASYLILAAGTWGTQHLLFKMRDKGKLPR
MLBr_00389|M.leprae_Br4923 GLWEVHTVRTGSWLRRGRRTFTAAHLLLAAGTWGTQRLLFRMRDQGKLPR
MAV_4354|M.avium_104 GLWQVRTVRTGSWVRRDRRTYTAKHLILAAGTWGTQHLLFKMRDEGRLPR
MAB_3719c|M.abscessus_ATCC_199 GVWRVSTKSTGRWVRKQRKTYTAKYVVLAAGTWGTQNLLFKMKDKGLLPK
* *.* * ** *: ::::** ::*****:***.***:*:* * **
TH_0480|M.thermoresistible__bu LSKRLGVLTRTNSESIVGAGRYRVSDDLDLTHGVAITSSIHPTPDTHIEP
MSMEG_1604|M.smegmatis_MC2_155 LSSRLGVLTRTNSESIVGAGRYEVTPDLDLTHGVAITSSIHPTPDTHIEP
Mflv_4906|M.gilvum_PYR-GCK LSDKLGVLTRTNSESIVGAGRLTVGDDLNLTHGVAITSSIHPTADTHVEP
Mvan_1514|M.vanbaalenii_PYR-1 LSDRLGVLTRTNSESIVGAGRLKVGDDLDLTHGVAITSSIHPTPDTHVEP
Mb3443c|M.bovis_AF2122/97 LSKRLGVLTRTNSESIVGAATLKVNPDLDLTHGVAITSSIHPTADTHIEP
Rv3409c|M.tuberculosis_H37Rv LSKRLGVLTRTNSESIVGAATLKVNPDLDLTHGVAITSSIHPTADTHIEP
MMAR_1140|M.marinum_M LSKRLGVLTRTNSESIVGAATLKVNPDLDLTHGVAITSSIHPTPDTHVEP
MUL_0903|M.ulcerans_Agy99 LSKRLGVLTRTNSESIVGAATLKVNPDLDLTHGVAITSSIHPTPDTHVEP
MLBr_00389|M.leprae_Br4923 LSQRLGVLTRTNSESIVGAGTLNVMPDRDLTHGVAITSSIHPTSDTHIEP
MAV_4354|M.avium_104 LSNRLGVLTRTNSESIVGAGKLEVDPNLDLTHGVAITSSIHPTPDTHIEP
MAB_3719c|M.abscessus_ATCC_199 LSQRLGVLTRTNSESIVGAGRLEYKDDLDLTHGVAITSSFHPTSDTHIEP
**.:***************. : :**********:***.***:**
TH_0480|M.thermoresistible__bu VRYGKGSNAMGLLQTLMTDGPGPEGTDVPRWKQLFHNAAEDPRGTLRLLN
MSMEG_1604|M.smegmatis_MC2_155 VRYGKGSNAMGLLQTLMTDGDGPDGAGIPRWKQLLRNAAEDPRGTLRLLN
Mflv_4906|M.gilvum_PYR-GCK VRYGKGSNAMGLLQTLMTDGTGPEGTDVPRWRQLLDTARNDRKGTLRLLN
Mvan_1514|M.vanbaalenii_PYR-1 VRYGKGSNAMGLLQTLMTDGTGPQGTDVPRWRQLIETARDDPRGTLRLLN
Mb3443c|M.bovis_AF2122/97 VRYGKGSNAMGLLQTLMTDGSGPQGTDVPRWRQLLQTASQDPRGTIRMLN
Rv3409c|M.tuberculosis_H37Rv VRYGKGSNAMGLLQTLMTDGSGPQGTDVPRWRQLLQTASQDPRGTIRMLN
MMAR_1140|M.marinum_M VRYGKGSNAMGLLQTLMTDGSGPSGTDVARWRQLLDQAGESPRRMFRLIN
MUL_0903|M.ulcerans_Agy99 VRYGKGSNAMGLLQTLMTDGSGPSGTDVARWRQLLDQAGESPRRMFRLIN
MLBr_00389|M.leprae_Br4923 IRYGKGSNAMGLLQTLMTDGPGPEGTDVPRWRQLLHQASEDPRRMLRLIN
MAV_4354|M.avium_104 VRYGKGSNAMGLLQTLMTDGAGPQGTDVPRWKQLLDQAREDPRRLMRLLN
MAB_3719c|M.abscessus_ATCC_199 VRYGKGSNAMGLLQTLMTDGDGPK----SRWRQLIENARADWRGTFRMFN
:******************* **. .**:**: * . : :*::*
TH_0480|M.thermoresistible__bu VRRWSERTLIALVMQHLDNSITTYTKRGLFGIRRYSSKQGHGQPNPTWIP
MSMEG_1604|M.smegmatis_MC2_155 VHRWSERTLIALVMQHLDNSITTYTKRNRLGIRRYLSKQGHGAPNPTWIP
Mflv_4906|M.gilvum_PYR-GCK PRRWSERTMIALVMQHLDNSITTYTRKTKFGFRMLDSKQGHGEPNPSWIP
Mvan_1514|M.vanbaalenii_PYR-1 PRRWSERTMIALVMQHLDNSITTFTRKTRFGFRMLDSRQGHGEPNPSWIP
Mb3443c|M.bovis_AF2122/97 PRQWSERTVIALVMQHLDNSITTFTKRGKLGIRWYSSKQGHGEPNPTWIP
Rv3409c|M.tuberculosis_H37Rv PRQWSERTVIALVMQHLDNSITTFTKRGKLGIRWYSSKQGHGEPNPTWIP
MMAR_1140|M.marinum_M PRQWSERTVIALVMQHLDNSITTFTKRGKLGIRWYSSKQGHGEPNPTWIP
MUL_0903|M.ulcerans_Agy99 PRQWSERTVIALVMQHLDNSITTFTKRGKLGIRWYSSKQGHGEPNPTWIP
MLBr_00389|M.leprae_Br4923 PRRWSERTVIALVMQHLDNSITTFTKRGKLGIRWYSSKQGNGEPNPSWIP
MAV_4354|M.avium_104 VHQWSERTLIALVMQHLDNSITTFTKRGRLGIRWYTSKQGHGEPNPTWIP
MAB_3719c|M.abscessus_ATCC_199 VTQWSERTVIALVMQHLDNSITTFTKKTLF-WRRLDSKQGHGEPNPTWIP
:*****:**************:*:: : * *:**:* ***:***
TH_0480|M.thermoresistible__bu VGNEVTRRIAEKIDGVAGGTWGELFNIPLTAHFLGGAAIGDSPEHGVIDP
MSMEG_1604|M.smegmatis_MC2_155 VGNEVTRRIAKKIDGVAGGTWGELFNIPLTAHFLGGAAIGDSPETGVIDP
Mflv_4906|M.gilvum_PYR-GCK AGNEVTRRIAEKIDGVAGGTWGELFNIPLTAHFLGGAAIADSPERGVIDP
Mvan_1514|M.vanbaalenii_PYR-1 AGNEVTRRIAKKIDGVAGGTWGELFNIPLTAHFLGGAAIGDSAETGVIDP
Mb3443c|M.bovis_AF2122/97 IGNQVTRRIAAKIDGVAGGTWGELFNIPLTAHFLGGAVIGDDPEHGVIDP
Rv3409c|M.tuberculosis_H37Rv IGNQVTRRIAAKIDGVAGGTWGELFNIPLTAHFLGGAVIGDDPEHGVIDP
MMAR_1140|M.marinum_M VGNQVTRRIAEKIDGVAGGTWGELFNIPLTAHFLGGAVIGDNPDSGVIDP
MUL_0903|M.ulcerans_Agy99 VGNQVTRRIAEKIDGVAGGTWGELFNIPLTAHFLGGAVIGDNPDSGVIDP
MLBr_00389|M.leprae_Br4923 IGNEVTRRLAAKIDGVAGGTWGELFNIPLTAHFLGGAVIGDNAEHGVIDP
MAV_4354|M.avium_104 VGNEVTRRIAAKIDGVAGGTWGELFNIPLTAHFLGGAVIGQDAEHGVIDP
MAB_3719c|M.abscessus_ATCC_199 AGNEATRRLAAKIDGVAGGTWGELFNIPLTAHFLGGAVIGTSPENGVIDP
**:.***:* **************************.*. ..: *****
TH_0480|M.thermoresistible__bu YHRVYGYPTLYVTDGAAISANLGVNPSLSITAQAERAASLWPNKGEQDLR
MSMEG_1604|M.smegmatis_MC2_155 YQRVYNYPTLHVMDGAAISANLGVNPSLSITAQAERATSLWPNKGEQDQR
Mflv_4906|M.gilvum_PYR-GCK YQRVWNYPTLSVMDGAAVSANLGVNPSLSITAQAERAAALWPNKGEEDLR
Mvan_1514|M.vanbaalenii_PYR-1 YQRVYGYPTLSVMDGAAISANLGVNPSLSITAQAERAASLWPNKGEDDLR
Mb3443c|M.bovis_AF2122/97 YHRVYGYPTLYVVDGAAISANLGVNPSLSIAAQAERAASLWPNKGETDRR
Rv3409c|M.tuberculosis_H37Rv YHRVYGYPTLYVVDGAAISANLGVNPSLSIAAQAERAASLWPNKGETDRR
MMAR_1140|M.marinum_M YHRVYGYPTMFVVDGAAISANLGVNPSLSITAQAERAASLWPNKGQNDER
MUL_0903|M.ulcerans_Agy99 YHRVYGYPTMFVVDGAAISANLGVNPSLSITAQAERAASLWPNKGQNDER
MLBr_00389|M.leprae_Br4923 YHRVYGYPTLYVVDGAAISANLGVNPSLSIAAQAERAASLWPNKGQHDQR
MAV_4354|M.avium_104 YHRVYGYPTLYVVDGAAISANLGVNPSLSITAQAERAAALWPNNGENDQR
MAB_3719c|M.abscessus_ATCC_199 YHRVYGYPTMYVVDGASISANLGVNPSLSITAQAERAASLWPNKGETDLR
*:**:.***: * ***::************:******::****:*: * *
TH_0480|M.thermoresistible__bu PAQGEPYRRLDPIPPKNPVVPAHAPAALRRNPTESVD---ATG
MSMEG_1604|M.smegmatis_MC2_155 PAQGEPYRRLAPIAPVRPVVPADAPGALRRLPIEPVS---SAG
Mflv_4906|M.gilvum_PYR-GCK PEQGQPYRRLSPIEPKHPVVPADAPAALRRIPIEPVT---SAG
Mvan_1514|M.vanbaalenii_PYR-1 PAQGEPYRRLSPIAPVRPVVPAEAPAALRRIPIEPVT---STG
Mb3443c|M.bovis_AF2122/97 PPQGEPYRRLAPIQPAHPVVPADAPGALRWLPIDPVS---NAG
Rv3409c|M.tuberculosis_H37Rv PPQGEPYRRLAPIQPAHPVVPADAPGALRWLPIDPVS---NAG
MMAR_1140|M.marinum_M PLQGDGYSRLSPVQPEHPVVPADAPGALRWLPIDPVSRVSSAG
MUL_0903|M.ulcerans_Agy99 PLQGDGYSRLSPVQPEHPVVPADAPGALRWLPIDPVSRVSSAG
MLBr_00389|M.leprae_Br4923 PRQGESYRRLAPIAPDHPVVPAEAPGALRWL------------
MAV_4354|M.avium_104 PAQGEPYRRMDPIAPKAPVVPAEAPGALRWTPTKPVS---SAS
MAB_3719c|M.abscessus_ATCC_199 PEQGLPYQRMAPVPPVHPVVPADAPGALRRLPIEPVS---SAS
* ** * *: *: * *****.**.***