For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_0396 | - | - | 100% (201) | thioesterase family protein |
M. thermoresistible (build 8) | TH_2294 | - | 7e-52 | 54.87% (195) | thioesterase family protein |
M. thermoresistible (build 8) | TH_0133 | - | 4e-12 | 26.82% (179) | CONSERVED HYPOTHETICAL PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0363c | - | 2e-11 | 27.14% (199) | hypothetical protein Mb0363c |
M. gilvum PYR-GCK | Mflv_2911 | - | 1e-51 | 55.85% (188) | thioesterase superfamily protein |
M. tuberculosis H37Rv | Rv0356c | - | 2e-11 | 27.14% (199) | hypothetical protein Rv0356c |
M. leprae Br4923 | MLBr_00279 | - | 8e-10 | 26.74% (187) | hypothetical protein MLBr_00279 |
M. abscessus ATCC 19977 | MAB_4248c | - | 3e-10 | 26.26% (179) | hypothetical protein MAB_4248c |
M. marinum M | MMAR_0247 | - | 1e-57 | 53.27% (199) | hypothetical protein MMAR_0247 |
M. avium 104 | MAV_2246 | - | 1e-49 | 52.76% (199) | thioesterase family protein |
M. smegmatis MC2 155 | MSMEG_2866 | - | 2e-72 | 67.17% (198) | thioesterase family protein |
M. ulcerans Agy99 | MUL_4866 | - | 9e-58 | 53.27% (199) | hypothetical protein MUL_4866 |
M. vanbaalenii PYR-1 | Mvan_2864 | - | 3e-60 | 58.88% (197) | thioesterase superfamily protein |
CLUSTAL 2.0.9 multiple sequence alignment TH_0396|M.thermoresistible__bu ----------------------------------------------MPEQ MSMEG_2866|M.smegmatis_MC2_155 ----------------------------------------------MSDP Mvan_2864|M.vanbaalenii_PYR-1 ----------------------------------------------MSRP MMAR_0247|M.marinum_M ----------------------------------------------MSDE MUL_4866|M.ulcerans_Agy99 ----------------------------------------------MSDE Mflv_2911|M.gilvum_PYR-GCK --------------------------------------------MFEYDK MAV_2246|M.avium_104 -------------------------------------------MDAIFEV Mb0363c|M.bovis_AF2122/97 ---------------------MT-----DASVHPDELDP----EYHHHGG Rv0356c|M.tuberculosis_H37Rv ---------------------MT-----DASVHPDELDP----EYHHHGG MLBr_00279|M.leprae_Br4923 ---------------------MTY----YSSLRPEDLPPE-RPKHEHYSG MAB_4248c|M.abscessus_ATCC_199 MHWRRAGPGSNDREAGHTLAVMTADGDRLAALHEEMNRAIREIDGEHSGG TH_0396|M.thermoresistible__bu VPVSRAEQDRARYEPLTSSVRRLIDATIRSEADEQAVRQAHALIDQAVAL MSMEG_2866|M.smegmatis_MC2_155 ISVADPEHARALYEPLTQSVRRLVDLTIRSEADDDAVRRAHRLVDEAAAL Mvan_2864|M.vanbaalenii_PYR-1 LRPEEVQRAEDLFGPLTQALRTLVDVAIRSDADDPDVTRAHELIEQATEL MMAR_0247|M.marinum_M WPGTDFDRLESVYGPLTASIRRLIDVSIRTQADPATVTASMAKIDSAAEE MUL_4866|M.ulcerans_Agy99 CPGTDFDRLESVYGPLTASIRRLIDVSIRTQADPATVTASMAKIDSAAEE Mflv_2911|M.gilvum_PYR-GCK ISADDYDRLRGRYEPLTDALRTLVDVGVHTDVDDATVREALVHLEAATAL MAV_2246|M.avium_104 LDAAEAERVTALYAPLADAVRELVDATIRTEVDDAVVAEARSAIEAVTAS Mb0363c|M.bovis_AF2122/97 FPEYGPASPGAGFGQFVATMRRLQDLAVAADPGDAVWDEAAERAAALVEL Rv0356c|M.tuberculosis_H37Rv FPEYGPASPGAGFGQFVATMRRLQDLAVAADPGDAVWDEAAERAAALVEL MLBr_00279|M.leprae_Br4923 FPEYELANPGVGFRRFVATMRRLQDLAVSADPSDEVWYAAADRAVALVEL MAB_4248c|M.abscessus_ATCC_199 FPQYSPSSVGPGFGRFLTAMRRLQDLAVSADMDDPRWDEAADLTEKLVEL : : ::* * * : :: . : . TH_0396|M.thermoresistible__bu LSSRLMPGSFGLRHDTDGNPMVWGNVAIGLRNAIAPPLRVHHQG-GRAWA MSMEG_2866|M.smegmatis_MC2_155 LGSRVAPGSFGIRSDAAGRPMPWGNVAIGVRNAIAPPLDVHRDSDGRATA Mvan_2864|M.vanbaalenii_PYR-1 LSTRLEPEPFPVRTTTTGRILTWGNVAIGMRNAVAPPLRLQRDDTGRVTT MMAR_0247|M.marinum_M LSDALHPGGFGVQLTPEGETVAWGNVVVGVRNPVAPPLSIHHEPNGLVWS MUL_4866|M.ulcerans_Agy99 LSDALHPGGFGVQLTPEGETVAWGNVVVGVRNPVAPPLSIHHEPDGLVWS Mflv_2911|M.gilvum_PYR-GCK LQQRLREDRPVLRHADTGRPVTWGNPAVGLRNAISPPIVVEHDGDGRCWS MAV_2246|M.avium_104 LRRRTRPVG-VSYRVD-GRPLPLGNAAIGVCNPIAPPIVVHHEGDGRCWS Mb0363c|M.bovis_AF2122/97 LSP--------FEADEGKAPAGRTPGLPGMGSLLLPPWTVTRYGTDGVEM Rv0356c|M.tuberculosis_H37Rv LSP--------FEADEGKAPAGRTPGLPGMGSLLLPPWTVTRYGTDGVEM MLBr_00279|M.leprae_Br4923 LGP--------FATDEGKAPAGRVPDMPGMGSLLLPPWTLTRSGPDSVEM MAB_4248c|M.abscessus_ATCC_199 MDP--------FEAPEGVGPANRVADEPANGHLLLPPWFIDKAGPDGIEA : . : ** : : . TH_0396|M.thermoresistible__bu EVTLGAPYEGPPGQVHGGVCALLLDHVLGATAHR-PGAPAFTGTITLRYL MSMEG_2866|M.smegmatis_MC2_155 DLVLGAPYEGPPGQVHGGVCALVLDHVLGATAHH-RHQTAFTGTLTIRYV Mvan_2864|M.vanbaalenii_PYR-1 DLTLGVPYEGPAGHVHGGVCALLLDHVLSATAHR-RGEPAFTGTLNVRYV MMAR_0247|M.marinum_M EFTLGAAYEGPPGHVHGGVCSMILDHVLGATAHL-PRRPAYTGTLTLRYR MUL_4866|M.ulcerans_Agy99 EFTLGAAYEGPPGHVHGGVCSMILDHVLGATAHL-PRRPAYTGTLTLRYR Mflv_2911|M.gilvum_PYR-GCK EFTLGPVYEGPPGWVHGGVSALVLDQILGEVASDSLSKARFTGTISLRYV MAV_2246|M.avium_104 EFVLGSAYEGPPRLVHGGVSALVLDHMLGEAASEGLSKARFTGTITVKYL Mb0363c|M.bovis_AF2122/97 RGSFSRFHVGGNSAVHGGVLPLLFDHMFGMISHAAGRPISRTAFLHVDYR Rv0356c|M.tuberculosis_H37Rv RGSFSRFHVGGNSAVHGGVLPLLFDHMFGMISHAAGRPISRTAFLHVDYR MLBr_00279|M.leprae_Br4923 TGYFTRFHVGFNHAVHGGVLPLVFDHLFGMISYTAGRSISRTAFLHVDYR MAB_4248c|M.abscessus_ATCC_199 HGDFPRFYLGGNGAVHGGILPLLFDHLFGMTVIMAGRTISRTAFLHVNYR : : * ****: .:::*:::. *. : : * TH_0396|M.thermoresistible__bu RATPLGVPLRTEAWVDREEGSKTFALGQISDHDGVVTVRGEGVFIRPG-- MSMEG_2866|M.smegmatis_MC2_155 RPTWLGA-LRAEAWIDREEGSKTYAVGHLLGPDGEVTAQAEGVFIRPRSA Mvan_2864|M.vanbaalenii_PYR-1 APTRLGR-LRVQAWTEREEGAKTFAAGHITDADGAVTVQAEGVFIRPKVK MMAR_0247|M.marinum_M RGTVLGRPLRAEGRVERIEGVKTFSVGHIADENG-ITVEAEGIFIQSKQI MUL_4866|M.ulcerans_Agy99 RGTVLGRPLRAEGRVERIEGVKTFSVGHIADESG-ITVEAEGIFIQSKQI Mflv_2911|M.gilvum_PYR-GCK RGTPLGP-LRAEAFVERTEGAKTFAKGYLMDADG-VTVEAEGVFITPAWA MAV_2246|M.avium_104 RGTPLGP-LRCDAWIDRREGVKVFARGIISDAAG-VTVEADGVFIEPAWA Mb0363c|M.bovis_AF2122/97 RITPIDVPLIVRGRVTNTEGRKAFVCAELFDSDETLLAEGNGLMVRLLPG Rv0356c|M.tuberculosis_H37Rv RITPIDVPLIVRGRVTNTEGRKAFVCAELFDSDETLLAEGNGLMVRLLPG MLBr_00279|M.leprae_Br4923 KITPIDEPLVMRGRVTRTEGRKAFVSAELVDGDEMLLAEGNGMMVRLLAG MAB_4248c|M.abscessus_ATCC_199 QVVPVGVPLTASSRIDEVDRRKAFVSAELCDAHGVVLADANGLMVQLLPG . :. * . . : *.: . : . : . .:*::: TH_0396|M.thermoresistible__bu ---- MSMEG_2866|M.smegmatis_MC2_155 R--- Mvan_2864|M.vanbaalenii_PYR-1 S--- MMAR_0247|M.marinum_M RA-- MUL_4866|M.ulcerans_Agy99 RA-- Mflv_2911|M.gilvum_PYR-GCK RDAG MAV_2246|M.avium_104 RETQ Mb0363c|M.bovis_AF2122/97 QP-- Rv0356c|M.tuberculosis_H37Rv QP-- MLBr_00279|M.leprae_Br4923 QP-- MAB_4248c|M.abscessus_ATCC_199 QP--